RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 STAT1P42224 750 aa10.41□□□□□ -0.74
PTPRA-202ENST00000318266 PSMC6P62333 389 aa10.41□□□□□ -0.74
PTPRA-202ENST00000318266 SPATA21Q7Z572 469 aa10.41□□□□□ -0.74
PTPRA-202ENST00000318266 CPNE8Q86YQ8 564 aa10.41□□□□□ -0.74
PTPRA-202ENST00000318266 GPR101Q96P66 508 aaPredicted RBP10.41□□□□□ -0.74
PTPRA-202ENST00000318266 USP40Q9NVE5 1235 aa10.41□□□□□ -0.74
PTPRA-202ENST00000318266 PCDHA2Q9Y5H9 948 aa10.41□□□□□ -0.74
PTPRA-202ENST00000318266 LINGO3P0C6S8 592 aa10.41□□□□□ -0.74
PTPRA-202ENST00000318266 POLD1P28340 1107 aa10.41□□□□□ -0.74
PTPRA-202ENST00000318266 PCK1P35558 622 aa10.41□□□□□ -0.74
PTPRA-202ENST00000318266 SLC16A2P36021 539 aa10.41□□□□□ -0.74
PTPRA-202ENST00000318266 VPS41P49754 854 aa10.41□□□□□ -0.74
PTPRA-202ENST00000318266 KCNQ4P56696 695 aa10.41□□□□□ -0.74
PTPRA-202ENST00000318266 BNIP1Q12981 228 aa10.41□□□□□ -0.74
PTPRA-202ENST00000318266 PDIA5Q14554 519 aa10.41□□□□□ -0.74
PTPRA-202ENST00000318266 PLS1Q14651 629 aa10.41□□□□□ -0.74
PTPRA-202ENST00000318266 ZNF746Q6NUN9 644 aaPredicted RBP10.41□□□□□ -0.74
PTPRA-202ENST00000318266 DPY19L2P1Q6NXN4 242 aa10.41□□□□□ -0.74
PTPRA-202ENST00000318266 CCDC137Q6PK04 289 aaKnown RBP10.41□□□□□ -0.74
PTPRA-202ENST00000318266 TAOK1Q7L7X3 1001 aa10.41□□□□□ -0.74
PTPRA-202ENST00000318266 FBXO33Q7Z6M2 555 aa10.41□□□□□ -0.74
PTPRA-202ENST00000318266 RFFLQ8WZ73 363 aa10.41□□□□□ -0.74
PTPRA-202ENST00000318266 HOMER3Q9NSC5 361 aa10.41□□□□□ -0.74
PTPRA-202ENST00000318266 COG5Q9UP83 839 aa10.41□□□□□ -0.74
PTPRA-202ENST00000318266 NUP98P52948 1817 aa10.41□□□□□ -0.74
PTPRA-202ENST00000318266 C10orf71Q711Q0 1435 aa10.41□□□□□ -0.74
PTPRA-202ENST00000318266 TAF1P21675 1872 aa10.41□□□□□ -0.74
PTPRA-202ENST00000318266 CYP4A11Q02928 519 aa10.41□□□□□ -0.74
PTPRA-202ENST00000318266 EPHA7Q15375 998 aa10.41□□□□□ -0.74
PTPRA-202ENST00000318266 TRIP13Q15645 432 aaPredicted RBP10.41□□□□□ -0.74
PTPRA-202ENST00000318266 INTS5Q6P9B9 1019 aaKnown RBP10.41□□□□□ -0.74
PTPRA-202ENST00000318266 ZDHHC14Q8IZN3 488 aa10.41□□□□□ -0.74
PTPRA-202ENST00000318266 IFT74Q96LB3 600 aa10.41□□□□□ -0.74
PTPRA-202ENST00000318266 SIX2Q9NPC8 291 aa10.41□□□□□ -0.74
PTPRA-202ENST00000318266 CCDC87Q9NVE4 849 aa10.41□□□□□ -0.74
PTPRA-202ENST00000318266 BSDC1Q9NW68 430 aaPredicted RBP10.41□□□□□ -0.74
PTPRA-202ENST00000318266 CTTNBP2NLQ9P2B4 639 aa10.41□□□□□ -0.74
PTPRA-202ENST00000318266 PFASO15067 1338 aa10.4□□□□□ -0.74
PTPRA-202ENST00000318266 ARAP2Q8WZ64 1704 aa10.4□□□□□ -0.74
PTPRA-202ENST00000318266 KIF3CO14782 793 aa10.4□□□□□ -0.74
PTPRA-202ENST00000318266 ATMINO43313 823 aaPredicted RBP10.4□□□□□ -0.74
PTPRA-202ENST00000318266 CDK8P49336 464 aa10.4□□□□□ -0.74
PTPRA-202ENST00000318266 CTCFP49711 727 aaPredicted RBP10.4□□□□□ -0.74
PTPRA-202ENST00000318266 SESN3P58005 492 aa10.4□□□□□ -0.74
PTPRA-202ENST00000318266 DRAP1Q14919 205 aaPredicted RBP10.4□□□□□ -0.74
PTPRA-202ENST00000318266 PARP10Q53GL7 1025 aa10.4□□□□□ -0.74
PTPRA-202ENST00000318266 ARSHQ5FYA8 562 aa10.4□□□□□ -0.74
PTPRA-202ENST00000318266 COL23A1Q86Y22 540 aaPredicted RBP10.4□□□□□ -0.74
PTPRA-202ENST00000318266 PRELID2Q8N945 189 aa10.4□□□□□ -0.74
PTPRA-202ENST00000318266 NAF1Q96HR8 494 aaKnown RBP10.4□□□□□ -0.74
PTPRA-202ENST00000318266 PWWP2AQ96N64 755 aa10.4□□□□□ -0.74
PTPRA-202ENST00000318266 TGS1Q96RS0 853 aaKnown RBP10.4□□□□□ -0.74
PTPRA-202ENST00000318266 CRAMP1Q96RY5 1269 aa10.4□□□□□ -0.74
PTPRA-202ENST00000318266 LZTS2Q9BRK4 669 aa10.4□□□□□ -0.74
PTPRA-202ENST00000318266 CCDC88AQ3V6T2 1871 aa10.4□□□□□ -0.74
PTPRA-202ENST00000318266 DPPA5A6NC42 116 aa10.4□□□□□ -0.74
PTPRA-202ENST00000318266 MAP3K13O43283 966 aa10.4□□□□□ -0.74
PTPRA-202ENST00000318266 HIP1RO75146 1068 aa10.4□□□□□ -0.74
PTPRA-202ENST00000318266 MED24O75448 989 aa10.4□□□□□ -0.74
PTPRA-202ENST00000318266 GCNT3O95395 438 aa10.4□□□□□ -0.74
PTPRA-202ENST00000318266 LDHBP07195 334 aaKnown RBP10.4□□□□□ -0.74
PTPRA-202ENST00000318266 ALADP13716 330 aa10.4□□□□□ -0.74
PTPRA-202ENST00000318266 MARSP56192 900 aaKnown RBP10.4□□□□□ -0.74
PTPRA-202ENST00000318266 BLMHQ13867 455 aa10.4□□□□□ -0.74
PTPRA-202ENST00000318266 MPP2Q14168 576 aa10.4□□□□□ -0.74
PTPRA-202ENST00000318266 MESDQ14696 234 aa10.4□□□□□ -0.74
PTPRA-202ENST00000318266 ZNF449Q6P9G9 518 aa10.4□□□□□ -0.74
PTPRA-202ENST00000318266 RDH13Q8NBN7 331 aa10.4□□□□□ -0.74
PTPRA-202ENST00000318266 SH3GL3Q99963 347 aa10.4□□□□□ -0.74
PTPRA-202ENST00000318266 ZFATQ9P243 1243 aa10.4□□□□□ -0.74
PTPRA-202ENST00000318266 ALG6Q9Y672 507 aa10.4□□□□□ -0.74
PTPRA-202ENST00000318266 A0A1B0GUL6 1792 aa10.39□□□□□ -0.75
PTPRA-202ENST00000318266 USP17L15C9J2P7 530 aa10.39□□□□□ -0.75
PTPRA-202ENST00000318266 USP17L13C9JLJ4 530 aa10.39□□□□□ -0.75
PTPRA-202ENST00000318266 USP17L11C9JVI0 530 aa10.39□□□□□ -0.75
PTPRA-202ENST00000318266 USP17L18D6R9N7 530 aa10.39□□□□□ -0.75
PTPRA-202ENST00000318266 USP17L22D6RA61 530 aa10.39□□□□□ -0.75
PTPRA-202ENST00000318266 USP17L17D6RBQ6 530 aa10.39□□□□□ -0.75
PTPRA-202ENST00000318266 USP17L19D6RCP7 530 aa10.39□□□□□ -0.75
PTPRA-202ENST00000318266 USP17L20D6RJB6 530 aa10.39□□□□□ -0.75
PTPRA-202ENST00000318266 SMIM24O75264 130 aa10.39□□□□□ -0.75
PTPRA-202ENST00000318266 NR3C1P04150 777 aa10.39□□□□□ -0.75
PTPRA-202ENST00000318266 TRIM49P0CI25 452 aa10.39□□□□□ -0.75
PTPRA-202ENST00000318266 TRIM49CP0CI26 452 aa10.39□□□□□ -0.75
PTPRA-202ENST00000318266 TARSP26639 723 aaKnown RBP10.39□□□□□ -0.75
PTPRA-202ENST00000318266 STX2P32856 288 aa10.39□□□□□ -0.75
PTPRA-202ENST00000318266 HOXD13P35453 343 aa10.39□□□□□ -0.75
PTPRA-202ENST00000318266 PRKCIP41743 596 aa10.39□□□□□ -0.75
PTPRA-202ENST00000318266 TUBP50607 506 aa10.39□□□□□ -0.75
PTPRA-202ENST00000318266 ZNF131P52739 623 aa10.39□□□□□ -0.75
PTPRA-202ENST00000318266 RAD23BP54727 409 aa10.39□□□□□ -0.75
PTPRA-202ENST00000318266 MGAT5Q09328 741 aa10.39□□□□□ -0.75
PTPRA-202ENST00000318266 USP17L24Q0WX57 530 aa10.39□□□□□ -0.75
PTPRA-202ENST00000318266 CTTNQ14247 550 aaKnown RBP10.39□□□□□ -0.75
PTPRA-202ENST00000318266 KNOP1Q1ED39 458 aaKnown RBP10.39□□□□□ -0.75
PTPRA-202ENST00000318266 C11orf91Q3C1V1 193 aa10.39□□□□□ -0.75
PTPRA-202ENST00000318266 USP17L6PQ6QN14 398 aa10.39□□□□□ -0.75
PTPRA-202ENST00000318266 VSIG1Q86XK7 387 aa10.39□□□□□ -0.75
PTPRA-202ENST00000318266 SRRM1Q8IYB3 904 aaKnown RBP10.39□□□□□ -0.75
PTPRA-202ENST00000318266 SLC35C1Q96A29 364 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms