RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 FERMT3Q86UX7 667 aa19.8■□□□□ 0.76
TPM1-203ENST00000317516 FOXP1Q9H334 677 aaPredicted RBP19.8■□□□□ 0.76
TPM1-203ENST00000317516 NGRNQ9NPE2 291 aaKnown RBP19.8■□□□□ 0.76
TPM1-203ENST00000317516 FAM105AQ9NUU6 356 aa19.8■□□□□ 0.76
TPM1-203ENST00000317516 HCSTQ9UBK5 93 aa19.8■□□□□ 0.76
TPM1-203ENST00000317516 NLRC5Q86WI3 1866 aa19.79■□□□□ 0.76
TPM1-203ENST00000317516 LOXHD1Q8IVV2 1947 aa19.79■□□□□ 0.76
TPM1-203ENST00000317516 LINC01565O15544 149 aa19.79■□□□□ 0.76
TPM1-203ENST00000317516 DGAT1O75907 488 aa19.79■□□□□ 0.76
TPM1-203ENST00000317516 ATF7P17544 494 aaPredicted RBP19.79■□□□□ 0.76
TPM1-203ENST00000317516 MCM7P33993 719 aa19.79■□□□□ 0.76
TPM1-203ENST00000317516 ERVFC1P60507 584 aa19.79■□□□□ 0.76
TPM1-203ENST00000317516 ORC2Q13416 577 aaPredicted RBP19.79■□□□□ 0.76
TPM1-203ENST00000317516 SMAD4Q13485 552 aaKnown RBP19.79■□□□□ 0.76
TPM1-203ENST00000317516 TFDP1Q14186 410 aa19.79■□□□□ 0.76
TPM1-203ENST00000317516 SMAD2Q15796 467 aaKnown RBP19.79■□□□□ 0.76
TPM1-203ENST00000317516 CLUL1Q15846 466 aa19.79■□□□□ 0.76
TPM1-203ENST00000317516 RNF149Q8NC42 400 aa19.79■□□□□ 0.76
TPM1-203ENST00000317516 EPHX3Q9H6B9 360 aa19.79■□□□□ 0.76
TPM1-203ENST00000317516 BMP2KQ9NSY1 1161 aaPredicted RBP19.79■□□□□ 0.76
TPM1-203ENST00000317516 AGPAT5Q9NUQ2 364 aa19.79■□□□□ 0.76
TPM1-203ENST00000317516 ZBTB39O15060 712 aa19.78■□□□□ 0.76
TPM1-203ENST00000317516 MBTPS2O43462 519 aa19.78■□□□□ 0.76
TPM1-203ENST00000317516 TBX10O75333 385 aa19.78■□□□□ 0.76
TPM1-203ENST00000317516 SRGAP2BP0DMP2 458 aa19.78■□□□□ 0.76
TPM1-203ENST00000317516 C8orf34Q49A92 452 aa19.78■□□□□ 0.76
TPM1-203ENST00000317516 TMC7Q7Z402 723 aa19.78■□□□□ 0.76
TPM1-203ENST00000317516 ADHFE1Q8IWW8 467 aa19.78■□□□□ 0.76
TPM1-203ENST00000317516 FBXO18Q8NFZ0 1043 aa19.78■□□□□ 0.76
TPM1-203ENST00000317516 POP1Q99575 1024 aaKnown RBP19.78■□□□□ 0.76
TPM1-203ENST00000317516 TCF25Q9BQ70 676 aa19.78■□□□□ 0.76
TPM1-203ENST00000317516 CD320Q9NPF0 282 aa19.78■□□□□ 0.76
TPM1-203ENST00000317516 ENTPD7Q9NQZ7 604 aa19.78■□□□□ 0.76
TPM1-203ENST00000317516 MUC3AQ02505 3323 aa19.78■□□□□ 0.76
TPM1-203ENST00000317516 PI4K2BG5E9Z4 385 aa19.77■□□□□ 0.76
TPM1-203ENST00000317516 FSCN2O14926 492 aa19.77■□□□□ 0.76
TPM1-203ENST00000317516 PER2O15055 1255 aa19.77■□□□□ 0.76
TPM1-203ENST00000317516 ERLIN2O94905 339 aa19.77■□□□□ 0.76
TPM1-203ENST00000317516 EYA4O95677 639 aa19.77■□□□□ 0.76
TPM1-203ENST00000317516 ALADP13716 330 aa19.77■□□□□ 0.76
TPM1-203ENST00000317516 RNASELQ05823 741 aaKnown RBP19.77■□□□□ 0.76
TPM1-203ENST00000317516 POU5F1BQ06416 359 aa19.77■□□□□ 0.76
TPM1-203ENST00000317516 NOMO2Q5JPE7 1267 aa19.77■□□□□ 0.76
TPM1-203ENST00000317516 CNNM3Q8NE01 707 aa19.77■□□□□ 0.76
TPM1-203ENST00000317516 ERMNQ8TAM6 284 aa19.77■□□□□ 0.76
TPM1-203ENST00000317516 MSLNLQ96KJ4 702 aa19.77■□□□□ 0.76
TPM1-203ENST00000317516 PCDHB2Q9Y5E7 798 aa19.77■□□□□ 0.76
TPM1-203ENST00000317516 WNT7AO00755 349 aa19.76■□□□□ 0.75
TPM1-203ENST00000317516 COL9A1P20849 921 aa19.76■□□□□ 0.75
TPM1-203ENST00000317516 AXLP30530 894 aa19.76■□□□□ 0.75
TPM1-203ENST00000317516 RARRES1P49788 294 aa19.76■□□□□ 0.75
TPM1-203ENST00000317516 BCAR1P56945 870 aa19.76■□□□□ 0.75
TPM1-203ENST00000317516 ZP2Q05996 745 aa19.76■□□□□ 0.75
TPM1-203ENST00000317516 COASYQ13057 564 aa19.76■□□□□ 0.75
TPM1-203ENST00000317516 DUSP6Q16828 381 aa19.76■□□□□ 0.75
TPM1-203ENST00000317516 PLPP4Q5VZY2 271 aa19.76■□□□□ 0.75
TPM1-203ENST00000317516 SLC39A11Q8N1S5 342 aa19.76■□□□□ 0.75
TPM1-203ENST00000317516 LPPQ93052 612 aa19.76■□□□□ 0.75
TPM1-203ENST00000317516 TMEM169Q96HH4 297 aa19.76■□□□□ 0.75
TPM1-203ENST00000317516 KIF2CQ99661 725 aa19.76■□□□□ 0.75
TPM1-203ENST00000317516 TMEM60Q9H2L4 133 aa19.76■□□□□ 0.75
TPM1-203ENST00000317516 TUFT1Q9NNX1 390 aa19.76■□□□□ 0.75
TPM1-203ENST00000317516 CLEC1BQ9P126 229 aa19.76■□□□□ 0.75
TPM1-203ENST00000317516 KANSL3Q9P2N6 904 aa19.76■□□□□ 0.75
TPM1-203ENST00000317516 NOL7Q9UMY1 257 aaKnown RBP19.76■□□□□ 0.75
TPM1-203ENST00000317516 PCDHGC5Q9Y5F6 944 aa19.76■□□□□ 0.75
TPM1-203ENST00000317516 OFD1O75665 1012 aa19.75■□□□□ 0.75
TPM1-203ENST00000317516 PBX3P40426 434 aa19.75■□□□□ 0.75
TPM1-203ENST00000317516 TECP42680 631 aa19.75■□□□□ 0.75
TPM1-203ENST00000317516 TRAPPC10P48553 1259 aa19.75■□□□□ 0.75
TPM1-203ENST00000317516 PTENP60484 403 aa19.75■□□□□ 0.75
TPM1-203ENST00000317516 ZNF174Q15697 407 aa19.75■□□□□ 0.75
TPM1-203ENST00000317516 LONRF3Q496Y0 759 aa19.75■□□□□ 0.75
TPM1-203ENST00000317516 TMEM31Q5JXX7 168 aa19.75■□□□□ 0.75
TPM1-203ENST00000317516 MRPL10Q7Z7H8 261 aaKnown RBP19.75■□□□□ 0.75
TPM1-203ENST00000317516 NOSTRINQ8IVI9 506 aa19.75■□□□□ 0.75
TPM1-203ENST00000317516 URGCPQ8TCY9 931 aa19.75■□□□□ 0.75
TPM1-203ENST00000317516 PIGOQ8TEQ8 1089 aa19.75■□□□□ 0.75
TPM1-203ENST00000317516 NACC1Q96RE7 527 aa19.75■□□□□ 0.75
TPM1-203ENST00000317516 MINDY3Q9H8M7 445 aa19.75■□□□□ 0.75
TPM1-203ENST00000317516 UPF2Q9HAU5 1272 aaKnown RBP19.75■□□□□ 0.75
TPM1-203ENST00000317516 UBN1Q9NPG3 1134 aa19.75■□□□□ 0.75
TPM1-203ENST00000317516 XPNPEP1Q9NQW7 623 aa19.75■□□□□ 0.75
TPM1-203ENST00000317516 INPP5FQ9Y2H2 1132 aa19.75■□□□□ 0.75
TPM1-203ENST00000317516 KIF3AQ9Y496 699 aa19.75■□□□□ 0.75
TPM1-203ENST00000317516 POTEMA6NI47 508 aa19.74■□□□□ 0.75
TPM1-203ENST00000317516 C19orf67A6NJJ6 358 aa19.74■□□□□ 0.75
TPM1-203ENST00000317516 INO80B-WBP1J3KQ70 363 aa19.74■□□□□ 0.75
TPM1-203ENST00000317516 ST18O60284 1047 aa19.74■□□□□ 0.75
TPM1-203ENST00000317516 ZC3H11AO75152 810 aaKnown RBP eCLIP19.74■□□□□ 0.75
TPM1-203ENST00000317516 OR52Z1P0C646 297 aa19.74■□□□□ 0.75
TPM1-203ENST00000317516 HOXA11P31270 313 aaPredicted RBP19.74■□□□□ 0.75
TPM1-203ENST00000317516 ARL2P36404 184 aa19.74■□□□□ 0.75
TPM1-203ENST00000317516 SMC1AQ14683 1233 aaKnown RBP19.74■□□□□ 0.75
TPM1-203ENST00000317516 RABEP1Q15276 862 aa19.74■□□□□ 0.75
TPM1-203ENST00000317516 TTC38Q5R3I4 469 aa19.74■□□□□ 0.75
TPM1-203ENST00000317516 IFNLR1Q8IU57 520 aaPredicted RBP19.74■□□□□ 0.75
TPM1-203ENST00000317516 TMEM87AQ8NBN3 555 aa19.74■□□□□ 0.75
TPM1-203ENST00000317516 SMRP1Q8NCR6 262 aa19.74■□□□□ 0.75
TPM1-203ENST00000317516 CCDC51Q96ER9 411 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms