RNA–Protein interactions for RNA: ENST00000317402.11

GEN1-201, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GEN1, Length 9,854 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-201ENST00000317402 PLXNA4Q9HCM2 1894 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 USP17L10C9JJH3 530 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 PPFIA4O75335 1185 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 TADA3O75528 432 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 STARD3NLO95772 234 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 GLI1P08151 1106 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 KRT7P08729 469 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 PHKA2P46019 1235 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 WNT7BP56706 349 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 MGARPQ8TDB4 240 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 NELFBQ8WX92 580 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 TAF4BQ92750 862 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 PIH1D1Q9NWS0 290 aaKnown RBP3.89□□□□□ -1.79
GEN1-201ENST00000317402 RGL1Q9NZL6 768 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 DKK3Q9UBP4 350 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 TECTAO75443 2155 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 TSPAN9O75954 239 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 BTDP43251 543 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 PSEN1P49768 467 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 IFIT1BQ5T764 474 aaKnown RBP3.89□□□□□ -1.79
GEN1-201ENST00000317402 ERMNQ8TAM6 284 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 PHF12Q96QT6 1004 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.89□□□□□ -1.791e-6■□□□□ 8.5
GEN1-201ENST00000317402 FAM204AQ9H8W3 233 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 THEGQ9P2T0 379 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 C5P01031 1676 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 PAPPAQ13219 1627 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 NEK2P51955 445 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 UTS2BQ765I0 119 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 DACT3Q96B18 629 aaPredicted RBP3.89□□□□□ -1.79
GEN1-201ENST00000317402 ERVK-5Q9HDB9 667 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 ALG13Q9NP73 1137 aaKnown RBP3.89□□□□□ -1.79
GEN1-201ENST00000317402 ADGRG1Q9Y653 693 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 STK36Q9NRP7 1315 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 ETS1P14921 441 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 HDLBPQ00341 1268 aaKnown RBP3.89□□□□□ -1.79
GEN1-201ENST00000317402 POSTNQ15063 836 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 PLCB4Q15147 1175 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 CERS5Q8N5B7 392 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 NCOA7Q8NI08 942 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 WNK4Q96J92 1243 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 HERPUD2Q9BSE4 406 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 NUF2Q9BZD4 464 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 SCHIP1Q9P0W5 487 aaPredicted RBP3.89□□□□□ -1.79
GEN1-201ENST00000317402 PRELID1Q9Y255 219 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 CTAGE9A4FU28 777 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 AKR1B1P15121 316 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 PPFIA1Q13136 1202 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 TBX2Q13207 712 aaPredicted RBP3.89□□□□□ -1.79
GEN1-201ENST00000317402 TXNRD1Q16881 649 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 KBTBD12Q3ZCT8 623 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 MFSD6Q6ZSS7 791 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 SRGAP1Q7Z6B7 1085 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 KIAA2013Q8IYS2 634 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 ZNF654Q8IZM8 581 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 NOP53Q9NZM5 478 aaKnown RBP3.89□□□□□ -1.79
GEN1-201ENST00000317402 PCDHA6Q9UN73 950 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 PCDHA8Q9Y5H6 950 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 GJA3Q9Y6H8 435 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 OBSL1O75147 1896 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 A0A1B0GVG6 124 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 SLC9A1P19634 815 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 MAST2Q6P0Q8 1798 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 INTS8Q75QN2 995 aaKnown RBP3.89□□□□□ -1.79
GEN1-201ENST00000317402 SPATA21Q7Z572 469 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 CTU1Q7Z7A3 348 aaKnown RBP3.89□□□□□ -1.79
GEN1-201ENST00000317402 WDR19Q8NEZ3 1342 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 SPDYE1Q8NFV5 336 aaPredicted RBP3.89□□□□□ -1.79
GEN1-201ENST00000317402 NUP210Q8TEM1 1887 aaPredicted RBP3.89□□□□□ -1.79
GEN1-201ENST00000317402 SPOCK2Q92563 424 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 ABCA3Q99758 1704 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 FAM167BQ9BTA0 163 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 SELENOOQ9BVL4 669 aa3.89□□□□□ -1.79
GEN1-201ENST00000317402 ZSCAN16Q9H4T2 348 aaPredicted RBP3.89□□□□□ -1.79
GEN1-201ENST00000317402 NUP188Q5SRE5 1749 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 CYP3A7-CYP3A51PA0A087WV96 503 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 DDTLA6NHG4 134 aaPredicted RBP3.88□□□□□ -1.79
GEN1-201ENST00000317402 TXNDC9O14530 226 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 CCNT1O60563 726 aaKnown RBP3.88□□□□□ -1.79
GEN1-201ENST00000317402 TLR2O60603 784 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 CUTAO60888 179 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 CALM1P0DP23 149 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 CALM2P0DP24 149 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 CALM3P0DP25 149 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 GJC1P36383 396 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 SLC1A4P43007 532 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 UBXN1Q04323 297 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 PPATQ06203 517 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 KCNMA1Q12791 1236 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 ITGB3BPQ13352 177 aaPredicted RBP3.88□□□□□ -1.79
GEN1-201ENST00000317402 WTAPQ15007 396 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 MDH1BQ5I0G3 518 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 RESP18Q5W5W9 173 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 CACNA2D4Q7Z3S7 1137 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 CRACR2BQ8N4Y2 399 aaPredicted RBP3.88□□□□□ -1.79
GEN1-201ENST00000317402 ARFGAP2Q8N6H7 521 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 PSD4Q8NDX1 1056 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 RPGRIP1Q96KN7 1286 aa3.88□□□□□ -1.79
GEN1-201ENST00000317402 RAB3IPQ96QF0 476 aaPredicted RBP3.88□□□□□ -1.79
GEN1-201ENST00000317402 UBAC1Q9BSL1 405 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms