RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 MAP9Q49MG5 647 aa8.28□□□□□ -1.08
TRIM55-202ENST00000315962 LBX2Q6XYB7 198 aa8.28□□□□□ -1.08
TRIM55-202ENST00000315962 HS2ST1Q7LGA3 356 aa8.28□□□□□ -1.08
TRIM55-202ENST00000315962 KAT2BQ92831 832 aa8.28□□□□□ -1.08
TRIM55-202ENST00000315962 SPAG5Q96R06 1193 aa8.28□□□□□ -1.08
TRIM55-202ENST00000315962 PDGFCQ9NRA1 345 aa8.28□□□□□ -1.08
TRIM55-202ENST00000315962 LARSQ9P2J5 1176 aaKnown RBP8.28□□□□□ -1.08
TRIM55-202ENST00000315962 SLC9A2Q9UBY0 812 aa8.28□□□□□ -1.08
TRIM55-202ENST00000315962 ADAMTS5Q9UNA0 930 aa8.28□□□□□ -1.08
TRIM55-202ENST00000315962 PLAGL2Q9UPG8 496 aa8.28□□□□□ -1.08
TRIM55-202ENST00000315962 TRAF3IP3Q9Y228 551 aa8.28□□□□□ -1.08
TRIM55-202ENST00000315962 SOWAHBA6NEL2 793 aa8.28□□□□□ -1.08
TRIM55-202ENST00000315962 PDXKO00764 312 aa8.28□□□□□ -1.08
TRIM55-202ENST00000315962 BCRP11274 1271 aa8.28□□□□□ -1.08
TRIM55-202ENST00000315962 PON1P27169 355 aa8.28□□□□□ -1.08
TRIM55-202ENST00000315962 NF2P35240 595 aa8.28□□□□□ -1.08
TRIM55-202ENST00000315962 PRKCEQ02156 737 aa8.28□□□□□ -1.08
TRIM55-202ENST00000315962 SPA17Q15506 151 aa8.28□□□□□ -1.08
TRIM55-202ENST00000315962 STXBP2Q15833 593 aa8.28□□□□□ -1.08
TRIM55-202ENST00000315962 HSDL1Q3SXM5 330 aa8.28□□□□□ -1.08
TRIM55-202ENST00000315962 COBLL1Q53SF7 1204 aa8.28□□□□□ -1.08
TRIM55-202ENST00000315962 PPP4R3CPQ6ZMV5 832 aa8.28□□□□□ -1.08
TRIM55-202ENST00000315962 CDR2LQ86X02 465 aaPredicted RBP8.28□□□□□ -1.08
TRIM55-202ENST00000315962 FBXO16Q8IX29 292 aaPredicted RBP8.28□□□□□ -1.08
TRIM55-202ENST00000315962 ANKRD13AQ8IZ07 590 aa8.28□□□□□ -1.08
TRIM55-202ENST00000315962 BCAS4Q8TDM0 211 aa8.28□□□□□ -1.08
TRIM55-202ENST00000315962 CCDC51Q96ER9 411 aa8.28□□□□□ -1.08
TRIM55-202ENST00000315962 INPP4AQ96PE3 977 aaPredicted RBP8.28□□□□□ -1.08
TRIM55-202ENST00000315962 TSPYL1Q9H0U9 437 aa8.28□□□□□ -1.08
TRIM55-202ENST00000315962 HAUS4Q9H6D7 363 aa8.28□□□□□ -1.08
TRIM55-202ENST00000315962 OLFML3Q9NRN5 406 aa8.28□□□□□ -1.08
TRIM55-202ENST00000315962 RBPJLQ9UBG7 517 aa8.28□□□□□ -1.08
TRIM55-202ENST00000315962 FRMPD4Q14CM0 1322 aa8.28□□□□□ -1.08
TRIM55-202ENST00000315962 KIF13BQ9NQT8 1826 aa8.27□□□□□ -1.08
TRIM55-202ENST00000315962 A0A087X0T9 212 aa8.27□□□□□ -1.09
TRIM55-202ENST00000315962 DENND3A2RUS2 1198 aa8.27□□□□□ -1.09
TRIM55-202ENST00000315962 GFPT2O94808 682 aa8.27□□□□□ -1.09
TRIM55-202ENST00000315962 ARIH2O95376 493 aa8.27□□□□□ -1.09
TRIM55-202ENST00000315962 AFPP02771 609 aaKnown RBP8.27□□□□□ -1.09
TRIM55-202ENST00000315962 FAM228BP0C875 321 aa8.27□□□□□ -1.09
TRIM55-202ENST00000315962 DLATP10515 647 aaKnown RBP8.27□□□□□ -1.09
TRIM55-202ENST00000315962 UCHL3P15374 230 aa8.27□□□□□ -1.09
TRIM55-202ENST00000315962 NPTX2P47972 431 aa8.27□□□□□ -1.09
TRIM55-202ENST00000315962 SLC20A2Q08357 652 aa8.27□□□□□ -1.09
TRIM55-202ENST00000315962 CBWD2Q8IUF1 395 aa8.27□□□□□ -1.09
TRIM55-202ENST00000315962 RBM46Q8TBY0 533 aaKnown RBP8.27□□□□□ -1.09
TRIM55-202ENST00000315962 TRAPPC12Q8WVT3 735 aa8.27□□□□□ -1.09
TRIM55-202ENST00000315962 IFT81Q8WYA0 676 aa8.27□□□□□ -1.09
TRIM55-202ENST00000315962 SLC10A4Q96EP9 437 aa8.27□□□□□ -1.09
TRIM55-202ENST00000315962 NUP58Q9BVL2 599 aa8.27□□□□□ -1.09
TRIM55-202ENST00000315962 TOPORSQ9NS56 1045 aaPredicted RBP8.27□□□□□ -1.09
TRIM55-202ENST00000315962 SEPT11Q9NVA2 429 aaKnown RBP8.27□□□□□ -1.09
TRIM55-202ENST00000315962 FRMD4BQ9Y2L6 1034 aa8.27□□□□□ -1.09
TRIM55-202ENST00000315962 JRKLQ9Y4A0 524 aa8.27□□□□□ -1.09
TRIM55-202ENST00000315962 ADGRA3Q8IWK6 1321 aa8.27□□□□□ -1.09
TRIM55-202ENST00000315962 RPL13P26373 211 aaKnown RBP8.27□□□□□ -1.09
TRIM55-202ENST00000315962 PTK2Q05397 1052 aa8.27□□□□□ -1.09
TRIM55-202ENST00000315962 KLHL30Q0D2K2 578 aa8.27□□□□□ -1.09
TRIM55-202ENST00000315962 EDRF1Q3B7T1 1238 aa8.27□□□□□ -1.09
TRIM55-202ENST00000315962 SFMBT2Q5VUG0 894 aa8.27□□□□□ -1.09
TRIM55-202ENST00000315962 ERO1BQ86YB8 467 aa8.27□□□□□ -1.09
TRIM55-202ENST00000315962 FAM76AQ8TAV0 307 aa8.27□□□□□ -1.09
TRIM55-202ENST00000315962 BICD1Q96G01 975 aa8.27□□□□□ -1.09
TRIM55-202ENST00000315962 CEP63Q96MT8 703 aa8.27□□□□□ -1.09
TRIM55-202ENST00000315962 ACBD3Q9H3P7 528 aa8.27□□□□□ -1.09
TRIM55-202ENST00000315962 TAF1DQ9H5J8 278 aaPredicted RBP8.27□□□□□ -1.09
TRIM55-202ENST00000315962 PCDHA13Q9Y5I0 950 aa8.27□□□□□ -1.09
TRIM55-202ENST00000315962 PSME4Q14997 1843 aa8.27□□□□□ -1.09
TRIM55-202ENST00000315962 PFASO15067 1338 aa8.27□□□□□ -1.09
TRIM55-202ENST00000315962 BRCA1P38398 1863 aaKnown RBP8.27□□□□□ -1.09
TRIM55-202ENST00000315962 KRT86O43790 486 aa8.26□□□□□ -1.09
TRIM55-202ENST00000315962 ATP4AP20648 1035 aa8.26□□□□□ -1.09
TRIM55-202ENST00000315962 ADSSP30520 456 aa8.26□□□□□ -1.09
TRIM55-202ENST00000315962 PSMC2P35998 433 aaKnown RBP8.26□□□□□ -1.09
TRIM55-202ENST00000315962 MAGEA9P43362 315 aa8.26□□□□□ -1.09
TRIM55-202ENST00000315962 MEA1Q16626 185 aa8.26□□□□□ -1.09
TRIM55-202ENST00000315962 HGSNATQ68CP4 663 aa8.26□□□□□ -1.09
TRIM55-202ENST00000315962 SCARA3Q6AZY7 606 aa8.26□□□□□ -1.09
TRIM55-202ENST00000315962 LRRC71Q8N4P6 559 aa8.26□□□□□ -1.09
TRIM55-202ENST00000315962 GLG1Q92896 1179 aa8.26□□□□□ -1.09
TRIM55-202ENST00000315962 KAT5Q92993 513 aa8.26□□□□□ -1.09
TRIM55-202ENST00000315962 C12orf42Q96LP6 360 aa8.26□□□□□ -1.09
TRIM55-202ENST00000315962 LRRIQ4A6NIV6 560 aa8.26□□□□□ -1.09
TRIM55-202ENST00000315962 TTLL13PA6NNM8 815 aa8.26□□□□□ -1.09
TRIM55-202ENST00000315962 PPFIA4O75335 1185 aa8.26□□□□□ -1.09
TRIM55-202ENST00000315962 GGPS1O95749 300 aa8.26□□□□□ -1.09
TRIM55-202ENST00000315962 FAM153BP0C7A2 387 aa8.26□□□□□ -1.09
TRIM55-202ENST00000315962 PLS3P13797 630 aa8.26□□□□□ -1.09
TRIM55-202ENST00000315962 GAP43P17677 238 aa8.26□□□□□ -1.09
TRIM55-202ENST00000315962 UBA1P22314 1058 aaKnown RBP8.26□□□□□ -1.09
TRIM55-202ENST00000315962 CNGA1P29973 690 aa8.26□□□□□ -1.09
TRIM55-202ENST00000315962 SSTR3P32745 418 aaPredicted RBP8.26□□□□□ -1.09
TRIM55-202ENST00000315962 CYLC1P35663 651 aaPredicted RBP8.26□□□□□ -1.09
TRIM55-202ENST00000315962 IRAK1P51617 712 aa8.26□□□□□ -1.09
TRIM55-202ENST00000315962 ALDH5A1P51649 535 aaPredicted RBP8.26□□□□□ -1.09
TRIM55-202ENST00000315962 CORO7P57737 925 aa8.26□□□□□ -1.09
TRIM55-202ENST00000315962 IGBP1P78318 339 aa8.26□□□□□ -1.09
TRIM55-202ENST00000315962 KRT76Q01546 638 aa8.26□□□□□ -1.09
TRIM55-202ENST00000315962 MAP2K1Q02750 393 aaPredicted RBP8.26□□□□□ -1.09
TRIM55-202ENST00000315962 PPP3CAQ08209 521 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms