RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 CAPZA3Q96KX2 299 aa7.64□□□□□ -1.19
LYSMD3-201ENST00000315948 PRIMPOLQ96LW4 560 aa7.64□□□□□ -1.19
LYSMD3-201ENST00000315948 TARS2Q9BW92 718 aaKnown RBP7.64□□□□□ -1.19
LYSMD3-201ENST00000315948 FLRT1Q9NZU1 646 aa7.64□□□□□ -1.19
LYSMD3-201ENST00000315948 EIF3DO15371 548 aaKnown RBP eCLIP7.64□□□□□ -1.19
LYSMD3-201ENST00000315948 B4GALT5O43286 388 aa7.64□□□□□ -1.19
LYSMD3-201ENST00000315948 GRIN3BO60391 1043 aa7.64□□□□□ -1.19
LYSMD3-201ENST00000315948 IQCF3P0C7M6 154 aa7.64□□□□□ -1.19
LYSMD3-201ENST00000315948 PPP1R2P41236 205 aa7.64□□□□□ -1.19
LYSMD3-201ENST00000315948 NLRP11P59045 1033 aaKnown RBP7.64□□□□□ -1.19
LYSMD3-201ENST00000315948 GTF2BQ00403 316 aa7.64□□□□□ -1.19
LYSMD3-201ENST00000315948 TMEM62Q0P6H9 643 aa7.64□□□□□ -1.19
LYSMD3-201ENST00000315948 SPRYD7Q5W111 196 aa7.64□□□□□ -1.19
LYSMD3-201ENST00000315948 MAMDC4Q6UXC1 1216 aa7.64□□□□□ -1.19
LYSMD3-201ENST00000315948 FASTKD5Q7L8L6 764 aaKnown RBP7.64□□□□□ -1.19
LYSMD3-201ENST00000315948 FRMD5Q7Z6J6 570 aa7.64□□□□□ -1.19
LYSMD3-201ENST00000315948 KIAA1328Q86T90 577 aa7.64□□□□□ -1.19
LYSMD3-201ENST00000315948 SMAP1Q8IYB5 467 aaPredicted RBP7.64□□□□□ -1.19
LYSMD3-201ENST00000315948 GPRC5AQ8NFJ5 357 aa7.64□□□□□ -1.19
LYSMD3-201ENST00000315948 PRPF31Q8WWY3 499 aaKnown RBP7.64□□□□□ -1.19
LYSMD3-201ENST00000315948 BICD1Q96G01 975 aa7.64□□□□□ -1.19
LYSMD3-201ENST00000315948 GPR88Q9GZN0 384 aa7.64□□□□□ -1.19
LYSMD3-201ENST00000315948 DEF6Q9H4E7 631 aa7.64□□□□□ -1.19
LYSMD3-201ENST00000315948 MINDY3Q9H8M7 445 aa7.64□□□□□ -1.19
LYSMD3-201ENST00000315948 TAS2R14Q9NYV8 317 aa7.64□□□□□ -1.19
LYSMD3-201ENST00000315948 LOC285556D6RIA3 1793 aa7.64□□□□□ -1.19
LYSMD3-201ENST00000315948 NOP56O00567 594 aaKnown RBP7.64□□□□□ -1.19
LYSMD3-201ENST00000315948 SNAI1O95863 264 aaPredicted RBP7.64□□□□□ -1.19
LYSMD3-201ENST00000315948 MAPTP10636 758 aaKnown RBP7.64□□□□□ -1.19
LYSMD3-201ENST00000315948 OSBPP22059 807 aa7.64□□□□□ -1.19
LYSMD3-201ENST00000315948 CASQ1P31415 396 aa7.64□□□□□ -1.19
LYSMD3-201ENST00000315948 TNFSF9P41273 254 aa7.64□□□□□ -1.19
LYSMD3-201ENST00000315948 KCNJ6P48051 423 aa7.64□□□□□ -1.19
LYSMD3-201ENST00000315948 NCKAP1LP55160 1127 aa7.64□□□□□ -1.19
LYSMD3-201ENST00000315948 BFSP1Q12934 665 aa7.64□□□□□ -1.19
LYSMD3-201ENST00000315948 SNRNP35Q16560 246 aaKnown RBP7.64□□□□□ -1.19
LYSMD3-201ENST00000315948 SPOPLQ6IQ16 392 aa7.64□□□□□ -1.19
LYSMD3-201ENST00000315948 ZBTB33Q86T24 672 aa7.64□□□□□ -1.19
LYSMD3-201ENST00000315948 METTL13Q8N6R0 699 aa7.64□□□□□ -1.19
LYSMD3-201ENST00000315948 CEP120Q8N960 986 aa7.64□□□□□ -1.19
LYSMD3-201ENST00000315948 IWS1Q96ST2 819 aa7.64□□□□□ -1.19
LYSMD3-201ENST00000315948 IFIH1Q9BYX4 1025 aaKnown RBP7.64□□□□□ -1.19
LYSMD3-201ENST00000315948 FBXO40Q9UH90 709 aa7.64□□□□□ -1.19
LYSMD3-201ENST00000315948 HYOU1Q9Y4L1 999 aa7.64□□□□□ -1.19
LYSMD3-201ENST00000315948 MYH9P35579 1960 aaKnown RBP7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 FGFR1OPO95684 399 aaKnown RBP7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 CTGFP29279 349 aa7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 CAPSQ13938 189 aa7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 ASTE1Q2TB18 679 aaPredicted RBP7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 C2CD6Q53TS8 623 aa7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 CCDC62Q6P9F0 684 aa7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 IRF2BP2Q7Z5L9 587 aa7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 OLIG1Q8TAK6 271 aa7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 NEK9Q8TD19 979 aa7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 SLC20A1Q8WUM9 679 aa7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 AFG1LQ8WV93 481 aa7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 POMGNT1Q8WZA1 660 aa7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 FRMD4BQ9Y2L6 1034 aa7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 A0A0G2JMZ2 1700 aa7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 ATG7O95352 703 aa7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 FGFR4P22455 802 aa7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 CYP2C19P33261 490 aa7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 TRIM14Q14142 442 aa7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 TSR1Q2NL82 804 aaKnown RBP7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 CELF3Q5SZQ8 465 aaKnown RBP7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 TAPT1Q6NXT6 567 aa7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 METTL7BQ6UX53 244 aa7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 GPR142Q7Z601 462 aa7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 DHX37Q8IY37 1157 aaKnown RBP7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 LMO3Q8TAP4 145 aa7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 TAS1R2Q8TE23 839 aa7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 JAKMIP2Q96AA8 810 aa7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 CCDC51Q96ER9 411 aa7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 NLRP4Q96MN2 994 aa7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 SENP7Q9BQF6 1050 aa7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 NAA15Q9BXJ9 866 aaKnown RBP7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 ARHGAP39Q9C0H5 1083 aa7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 ATP6V0A4Q9HBG4 840 aa7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 GINS2Q9Y248 185 aa7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 PCDHA13Q9Y5I0 950 aa7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 FOXN3O00409 490 aaPredicted RBP7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 CTIFO43310 598 aaKnown RBP7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 USP8P40818 1118 aa7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 ZNF157P51786 506 aaPredicted RBP7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 RNASE9P60153 205 aaKnown RBP7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 XKR3Q5GH77 459 aa7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 SFMBT2Q5VUG0 894 aa7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 PPP4R3CPQ6ZMV5 832 aa7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 TMEM192Q8IY95 271 aa7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 ZNF516Q92618 1163 aa7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 ACCSQ96QU6 501 aa7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 SPAG5Q96R06 1193 aa7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 TMEM117Q9H0C3 514 aa7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 CXCL16Q9H2A7 254 aa7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 PDE11AQ9HCR9 933 aa7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 PLCB1Q9NQ66 1216 aa7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 ANKEF1Q9NU02 776 aa7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 CEP72Q9P209 647 aa7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 NFASCO94856 1347 aa7.63□□□□□ -1.19
LYSMD3-201ENST00000315948 ZNFX1Q9P2E3 1918 aaKnown RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms