RNA–Protein interactions for RNA: ENST00000315616.11

RPUSD2-201, Transcript of RNA pseudouridylate synthase domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPUSD2, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD2-201ENST00000315616 PCDHA10Q9Y5I2 948 aa16.06■□□□□ 0.16
RPUSD2-201ENST00000315616 TARSL2A2RTX5 802 aaKnown RBP16.05■□□□□ 0.16
RPUSD2-201ENST00000315616 BTNL10A8MVZ5 291 aa16.05■□□□□ 0.16
RPUSD2-201ENST00000315616 ATP2A1O14983 1001 aa16.05■□□□□ 0.16
RPUSD2-201ENST00000315616 STBD1O95210 358 aa16.05■□□□□ 0.16
RPUSD2-201ENST00000315616 SOX5P35711 763 aa16.05■□□□□ 0.16
RPUSD2-201ENST00000315616 STAT1P42224 750 aa16.05■□□□□ 0.16
RPUSD2-201ENST00000315616 NCKAP1LP55160 1127 aa16.05■□□□□ 0.16
RPUSD2-201ENST00000315616 MYL7Q01449 175 aa16.05■□□□□ 0.16
RPUSD2-201ENST00000315616 ITIH3Q06033 890 aa16.05■□□□□ 0.16
RPUSD2-201ENST00000315616 PPP3CAQ08209 521 aa16.05■□□□□ 0.16
RPUSD2-201ENST00000315616 C1orf220Q5T0J3 134 aa16.05■□□□□ 0.16
RPUSD2-201ENST00000315616 FAM102BQ5T8I3 360 aa16.05■□□□□ 0.16
RPUSD2-201ENST00000315616 MEI1Q5TIA1 1274 aa16.05■□□□□ 0.16
RPUSD2-201ENST00000315616 ZNF746Q6NUN9 644 aaPredicted RBP16.05■□□□□ 0.16
RPUSD2-201ENST00000315616 C12orf56Q8IXR9 622 aa16.05■□□□□ 0.16
RPUSD2-201ENST00000315616 MMGT1Q8N4V1 131 aa16.05■□□□□ 0.16
RPUSD2-201ENST00000315616 PLEKHO2Q8TD55 490 aa16.05■□□□□ 0.16
RPUSD2-201ENST00000315616 HDAC7Q8WUI4 952 aa16.05■□□□□ 0.16
RPUSD2-201ENST00000315616 ZBTB9Q96C00 473 aa16.05■□□□□ 0.16
RPUSD2-201ENST00000315616 HINFPQ9BQA5 517 aa16.05■□□□□ 0.16
RPUSD2-201ENST00000315616 SYT17Q9BSW7 474 aa16.05■□□□□ 0.16
RPUSD2-201ENST00000315616 ACBD3Q9H3P7 528 aa16.05■□□□□ 0.16
RPUSD2-201ENST00000315616 PACSIN2Q9UNF0 486 aaPredicted RBP16.05■□□□□ 0.16
RPUSD2-201ENST00000315616 MAFGO15525 162 aa16.05■□□□□ 0.16
RPUSD2-201ENST00000315616 FERP16591 822 aa16.05■□□□□ 0.16
RPUSD2-201ENST00000315616 SOX10P56693 466 aa16.05■□□□□ 0.16
RPUSD2-201ENST00000315616 SLC30A5Q8TAD4 765 aa16.05■□□□□ 0.16
RPUSD2-201ENST00000315616 LRRC1Q9BTT6 524 aa16.05■□□□□ 0.16
RPUSD2-201ENST00000315616 TEX13BQ9BXU2 312 aa16.05■□□□□ 0.16
RPUSD2-201ENST00000315616 HSPBP1Q9NZL4 362 aa16.05■□□□□ 0.16
RPUSD2-201ENST00000315616 GABBR1Q9UBS5 961 aa16.05■□□□□ 0.16
RPUSD2-201ENST00000315616 APEX2Q9UBZ4 518 aa16.05■□□□□ 0.16
RPUSD2-201ENST00000315616 TCEAL9Q9UHQ7 104 aa16.05■□□□□ 0.16
RPUSD2-201ENST00000315616 SPDYE16A6NNV3 312 aaPredicted RBP16.04■□□□□ 0.16
RPUSD2-201ENST00000315616 PEX10O60683 326 aa16.04■□□□□ 0.16
RPUSD2-201ENST00000315616 USP2O75604 605 aaPredicted RBP16.04■□□□□ 0.16
RPUSD2-201ENST00000315616 VAMP7P51809 220 aa16.04■□□□□ 0.16
RPUSD2-201ENST00000315616 GYS2P54840 703 aa16.04■□□□□ 0.16
RPUSD2-201ENST00000315616 LNX1Q8TBB1 728 aaPredicted RBP16.04■□□□□ 0.16
RPUSD2-201ENST00000315616 KIFC3Q9BVG8 833 aa16.04■□□□□ 0.16
RPUSD2-201ENST00000315616 TIPINQ9BVW5 301 aa16.04■□□□□ 0.16
RPUSD2-201ENST00000315616 EMSYQ7Z589 1322 aa16.04■□□□□ 0.16
RPUSD2-201ENST00000315616 MYBL2P10244 700 aa16.04■□□□□ 0.16
RPUSD2-201ENST00000315616 ADSSP30520 456 aa16.04■□□□□ 0.16
RPUSD2-201ENST00000315616 MATR3P43243 847 aaKnown RBP eCLIP16.04■□□□□ 0.16
RPUSD2-201ENST00000315616 MRPS25P82663 173 aaKnown RBP16.04■□□□□ 0.16
RPUSD2-201ENST00000315616 CASP8Q14790 479 aa16.04■□□□□ 0.16
RPUSD2-201ENST00000315616 SWSAP1Q6NVH7 229 aa16.04■□□□□ 0.16
RPUSD2-201ENST00000315616 INTS8Q75QN2 995 aaKnown RBP16.04■□□□□ 0.16
RPUSD2-201ENST00000315616 GPC2Q8N158 579 aa16.04■□□□□ 0.16
RPUSD2-201ENST00000315616 XXYLT1Q8NBI6 393 aa16.04■□□□□ 0.16
RPUSD2-201ENST00000315616 TMEM161BQ8NDZ6 487 aa16.04■□□□□ 0.16
RPUSD2-201ENST00000315616 RDM1Q8NG50 284 aa16.04■□□□□ 0.16
RPUSD2-201ENST00000315616 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.04■□□□□ 0.16
RPUSD2-201ENST00000315616 BSNDQ8WZ55 320 aa16.04■□□□□ 0.16
RPUSD2-201ENST00000315616 MYCBPQ99417 103 aaPredicted RBP16.04■□□□□ 0.16
RPUSD2-201ENST00000315616 SYT11Q9BT88 431 aa16.04■□□□□ 0.16
RPUSD2-201ENST00000315616 GOLPH3Q9H4A6 298 aa16.04■□□□□ 0.16
RPUSD2-201ENST00000315616 TMOD4Q9NZQ9 345 aa16.04■□□□□ 0.16
RPUSD2-201ENST00000315616 LCTP09848 1927 aa16.03■□□□□ 0.16
RPUSD2-201ENST00000315616 ANKRD63C9JTQ0 380 aa16.03■□□□□ 0.16
RPUSD2-201ENST00000315616 SORBS3O60504 671 aa16.03■□□□□ 0.16
RPUSD2-201ENST00000315616 KRT13P13646 458 aa16.03■□□□□ 0.16
RPUSD2-201ENST00000315616 ANXA13P27216 316 aa16.03■□□□□ 0.16
RPUSD2-201ENST00000315616 NPTX2P47972 431 aa16.03■□□□□ 0.16
RPUSD2-201ENST00000315616 DNA2P51530 1060 aa16.03■□□□□ 0.16
RPUSD2-201ENST00000315616 NOL9Q5SY16 702 aaKnown RBP16.03■□□□□ 0.16
RPUSD2-201ENST00000315616 FAM71BQ8TC56 605 aa16.03■□□□□ 0.16
RPUSD2-201ENST00000315616 ACAD9Q9H845 621 aa16.03■□□□□ 0.16
RPUSD2-201ENST00000315616 PDE11AQ9HCR9 933 aa16.03■□□□□ 0.16
RPUSD2-201ENST00000315616 HOXC10Q9NYD6 342 aa16.03■□□□□ 0.16
RPUSD2-201ENST00000315616 TSKSQ9UJT2 592 aa16.03■□□□□ 0.16
RPUSD2-201ENST00000315616 GOLGA8IPA6NC78 632 aa16.02■□□□□ 0.16
RPUSD2-201ENST00000315616 GOLGA8JA6NMD2 632 aa16.02■□□□□ 0.16
RPUSD2-201ENST00000315616 CCDC169A6NNP5 214 aa16.02■□□□□ 0.16
RPUSD2-201ENST00000315616 LRRIQ3A6PVS8 624 aaPredicted RBP16.02■□□□□ 0.16
RPUSD2-201ENST00000315616 GCLMP48507 274 aa16.02■□□□□ 0.16
RPUSD2-201ENST00000315616 SP4Q02446 784 aa16.02■□□□□ 0.16
RPUSD2-201ENST00000315616 FSTL1Q12841 308 aa16.02■□□□□ 0.16
RPUSD2-201ENST00000315616 ARHGAP44Q17R89 818 aa16.02■□□□□ 0.16
RPUSD2-201ENST00000315616 HSP90B2PQ58FF3 399 aa16.02■□□□□ 0.16
RPUSD2-201ENST00000315616 CCDC181Q5TID7 509 aa16.02■□□□□ 0.16
RPUSD2-201ENST00000315616 CCNI2Q6ZMN8 369 aaPredicted RBP16.02■□□□□ 0.16
RPUSD2-201ENST00000315616 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.02■□□□□ 0.16
RPUSD2-201ENST00000315616 GLYCTKQ8IVS8 523 aa16.02■□□□□ 0.16
RPUSD2-201ENST00000315616 LRRC57Q8N9N7 239 aa16.02■□□□□ 0.16
RPUSD2-201ENST00000315616 U2AF1L4Q8WU68 220 aaKnown RBP16.02■□□□□ 0.16
RPUSD2-201ENST00000315616 DMGDHQ9UI17 866 aaKnown RBP16.02■□□□□ 0.16
RPUSD2-201ENST00000315616 TBX20Q9UMR3 447 aa16.02■□□□□ 0.16
RPUSD2-201ENST00000315616 FOXN3O00409 490 aaPredicted RBP16.02■□□□□ 0.15
RPUSD2-201ENST00000315616 SP2Q02086 613 aa16.02■□□□□ 0.15
RPUSD2-201ENST00000315616 CEP170P1Q96L14 293 aa16.02■□□□□ 0.15
RPUSD2-201ENST00000315616 RBM12Q9NTZ6 932 aaKnown RBP16.02■□□□□ 0.15
RPUSD2-201ENST00000315616 PPP2R3BQ9Y5P8 575 aa16.02■□□□□ 0.15
RPUSD2-201ENST00000315616 PFASO15067 1338 aa16.02■□□□□ 0.15
RPUSD2-201ENST00000315616 WDR90Q96KV7 1748 aa16.01■□□□□ 0.15
RPUSD2-201ENST00000315616 SPATA31C2B4DYI2 1134 aa16.01■□□□□ 0.15
RPUSD2-201ENST00000315616 ADRB2P07550 413 aa16.01■□□□□ 0.15
RPUSD2-201ENST00000315616 PAFAH1B1P43034 410 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms