RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 TBC1D1Q86TI0 1168 aaPredicted RBP14.52□□□□□ -0.08
SKA3-202ENST00000314759 KSR1Q8IVT5 923 aa14.52□□□□□ -0.08
SKA3-202ENST00000314759 RABGAP1Q9Y3P9 1069 aa14.52□□□□□ -0.08
SKA3-202ENST00000314759 FRMPD4Q14CM0 1322 aa14.52□□□□□ -0.08
SKA3-202ENST00000314759 ASAP2O43150 1006 aa14.52□□□□□ -0.09
SKA3-202ENST00000314759 KRT13P13646 458 aa14.52□□□□□ -0.09
SKA3-202ENST00000314759 CDC25CP30307 473 aa14.52□□□□□ -0.09
SKA3-202ENST00000314759 PTGIRP43119 386 aa14.52□□□□□ -0.09
SKA3-202ENST00000314759 SNAP25P60880 206 aa14.52□□□□□ -0.09
SKA3-202ENST00000314759 FAM98CQ17RN3 349 aaKnown RBP14.52□□□□□ -0.09
SKA3-202ENST00000314759 FAM133BQ5BKY9 247 aaKnown RBP14.52□□□□□ -0.09
SKA3-202ENST00000314759 RINT1Q6NUQ1 792 aa14.52□□□□□ -0.09
SKA3-202ENST00000314759 LRRC34Q8IZ02 419 aa14.52□□□□□ -0.09
SKA3-202ENST00000314759 CYP2W1Q8TAV3 490 aa14.52□□□□□ -0.09
SKA3-202ENST00000314759 TBC1D16Q8TBP0 767 aa14.52□□□□□ -0.09
SKA3-202ENST00000314759 TRIM6Q9C030 488 aaPredicted RBP14.52□□□□□ -0.09
SKA3-202ENST00000314759 SEPT11Q9NVA2 429 aaKnown RBP14.52□□□□□ -0.09
SKA3-202ENST00000314759 VAV3Q9UKW4 847 aa14.52□□□□□ -0.09
SKA3-202ENST00000314759 ALG6Q9Y672 507 aa14.52□□□□□ -0.09
SKA3-202ENST00000314759 EML1O00423 815 aa14.52□□□□□ -0.09
SKA3-202ENST00000314759 MSH4O15457 936 aa14.52□□□□□ -0.09
SKA3-202ENST00000314759 RGS16O15492 202 aaPredicted RBP14.52□□□□□ -0.09
SKA3-202ENST00000314759 EYA4O95677 639 aa14.52□□□□□ -0.09
SKA3-202ENST00000314759 LRCH2Q5VUJ6 765 aa14.52□□□□□ -0.09
SKA3-202ENST00000314759 ZDHHC14Q8IZN3 488 aa14.52□□□□□ -0.09
SKA3-202ENST00000314759 ANKS4BQ8N8V4 417 aa14.52□□□□□ -0.09
SKA3-202ENST00000314759 PIGOQ8TEQ8 1089 aa14.52□□□□□ -0.09
SKA3-202ENST00000314759 EIF2AK1Q9BQI3 630 aaKnown RBP14.52□□□□□ -0.09
SKA3-202ENST00000314759 GGT7Q9UJ14 662 aa14.52□□□□□ -0.09
SKA3-202ENST00000314759 TRPC6Q9Y210 931 aa14.52□□□□□ -0.09
SKA3-202ENST00000314759 ANKRD62A6NC57 917 aa14.51□□□□□ -0.09
SKA3-202ENST00000314759 TNFAIP3P21580 790 aa14.51□□□□□ -0.09
SKA3-202ENST00000314759 RPL21P46778 160 aaKnown RBP14.51□□□□□ -0.09
SKA3-202ENST00000314759 CCNHP51946 323 aaPredicted RBP14.51□□□□□ -0.09
SKA3-202ENST00000314759 SHROOM1Q2M3G4 852 aaPredicted RBP14.51□□□□□ -0.09
SKA3-202ENST00000314759 PRR5LQ6MZQ0 368 aa14.51□□□□□ -0.09
SKA3-202ENST00000314759 PRELID2Q8N945 189 aa14.51□□□□□ -0.09
SKA3-202ENST00000314759 CCDC63Q8NA47 563 aa14.51□□□□□ -0.09
SKA3-202ENST00000314759 UHMK1Q8TAS1 419 aaKnown RBP14.51□□□□□ -0.09
SKA3-202ENST00000314759 KRT35Q92764 455 aa14.51□□□□□ -0.09
SKA3-202ENST00000314759 FAM20AQ96MK3 541 aa14.51□□□□□ -0.09
SKA3-202ENST00000314759 PRMT1Q99873 361 aaKnown RBP14.51□□□□□ -0.09
SKA3-202ENST00000314759 CCNL1Q9UK58 526 aaPredicted RBP14.51□□□□□ -0.09
SKA3-202ENST00000314759 SLC12A4Q9UP95 1085 aa14.51□□□□□ -0.09
SKA3-202ENST00000314759 AGAP1Q9UPQ3 857 aa14.51□□□□□ -0.09
SKA3-202ENST00000314759 C10orf71Q711Q0 1435 aa14.51□□□□□ -0.09
SKA3-202ENST00000314759 UBAP1LF5GYI3 381 aa14.51□□□□□ -0.09
SKA3-202ENST00000314759 TRIM49P0CI25 452 aa14.51□□□□□ -0.09
SKA3-202ENST00000314759 TRIM49CP0CI26 452 aa14.51□□□□□ -0.09
SKA3-202ENST00000314759 MARCKSL1P49006 195 aa14.51□□□□□ -0.09
SKA3-202ENST00000314759 ARHGAP44Q17R89 818 aa14.51□□□□□ -0.09
SKA3-202ENST00000314759 NBPF9Q3BBW0 867 aa14.51□□□□□ -0.09
SKA3-202ENST00000314759 TTC27Q6P3X3 843 aa14.51□□□□□ -0.09
SKA3-202ENST00000314759 MYCT1Q8N699 235 aa14.51□□□□□ -0.09
SKA3-202ENST00000314759 INTS2Q9H0H0 1204 aaKnown RBP14.51□□□□□ -0.09
SKA3-202ENST00000314759 INTS9Q9NV88 658 aaKnown RBP14.51□□□□□ -0.09
SKA3-202ENST00000314759 USP40Q9NVE5 1235 aa14.51□□□□□ -0.09
SKA3-202ENST00000314759 APEX2Q9UBZ4 518 aa14.51□□□□□ -0.09
SKA3-202ENST00000314759 EIF3DO15371 548 aaKnown RBP eCLIP14.5□□□□□ -0.09
SKA3-202ENST00000314759 ITIH4Q14624 930 aa14.5□□□□□ -0.09
SKA3-202ENST00000314759 EPS8L3Q8TE67 593 aaKnown RBP14.5□□□□□ -0.09
SKA3-202ENST00000314759 ELAC2Q9BQ52 826 aaKnown RBP14.5□□□□□ -0.09
SKA3-202ENST00000314759 POLR3CQ9BUI4 534 aaPredicted RBP14.5□□□□□ -0.09
SKA3-202ENST00000314759 CNOT7Q9UIV1 285 aaKnown RBP14.5□□□□□ -0.09
SKA3-202ENST00000314759 RASAL2Q9UJF2 1139 aa14.5□□□□□ -0.09
SKA3-202ENST00000314759 PCDHA3Q9Y5H8 950 aa14.5□□□□□ -0.09
SKA3-202ENST00000314759 C6orf229H3BNL8 230 aa14.5□□□□□ -0.09
SKA3-202ENST00000314759 FOXN3O00409 490 aaPredicted RBP14.5□□□□□ -0.09
SKA3-202ENST00000314759 PPP1R12AO14974 1030 aaPredicted RBP14.5□□□□□ -0.09
SKA3-202ENST00000314759 ZBTB39O15060 712 aa14.5□□□□□ -0.09
SKA3-202ENST00000314759 PHF2O75151 1096 aa14.5□□□□□ -0.09
SKA3-202ENST00000314759 ANP32DO95626 131 aa14.5□□□□□ -0.09
SKA3-202ENST00000314759 AGTP01019 485 aa14.5□□□□□ -0.09
SKA3-202ENST00000314759 TAL1P17542 331 aaPredicted RBP14.5□□□□□ -0.09
SKA3-202ENST00000314759 GAP43P17677 238 aa14.5□□□□□ -0.09
SKA3-202ENST00000314759 SREBF1P36956 1147 aa14.5□□□□□ -0.09
SKA3-202ENST00000314759 SLCO1A2P46721 670 aa14.5□□□□□ -0.09
SKA3-202ENST00000314759 C6orf118Q5T5N4 469 aa14.5□□□□□ -0.09
SKA3-202ENST00000314759 PHLDB3Q6NSJ2 640 aa14.5□□□□□ -0.09
SKA3-202ENST00000314759 SLC30A10Q6XR72 485 aa14.5□□□□□ -0.09
SKA3-202ENST00000314759 EBF2Q9HAK2 575 aa14.5□□□□□ -0.09
SKA3-202ENST00000314759 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.5□□□□□ -0.09
SKA3-202ENST00000314759 KDM4FA0A1W2PPD8 638 aa14.49□□□□□ -0.09
SKA3-202ENST00000314759 LRRN2O75325 713 aa14.49□□□□□ -0.09
SKA3-202ENST00000314759 FAM13AO94988 1023 aa14.49□□□□□ -0.09
SKA3-202ENST00000314759 EEF2P13639 858 aaKnown RBP14.49□□□□□ -0.09
SKA3-202ENST00000314759 FGFR4P22455 802 aa14.49□□□□□ -0.09
SKA3-202ENST00000314759 CHRNA3P32297 505 aa14.49□□□□□ -0.09
SKA3-202ENST00000314759 CYP2J2P51589 502 aa14.49□□□□□ -0.09
SKA3-202ENST00000314759 CTTNQ14247 550 aaKnown RBP14.49□□□□□ -0.09
SKA3-202ENST00000314759 NFIL3Q16649 462 aa14.49□□□□□ -0.09
SKA3-202ENST00000314759 CRY2Q49AN0 593 aa14.49□□□□□ -0.09
SKA3-202ENST00000314759 COL23A1Q86Y22 540 aaPredicted RBP14.49□□□□□ -0.09
SKA3-202ENST00000314759 CERS5Q8N5B7 392 aa14.49□□□□□ -0.09
SKA3-202ENST00000314759 MKNK1Q9BUB5 465 aa14.49□□□□□ -0.09
SKA3-202ENST00000314759 ABCF3Q9NUQ8 709 aa14.49□□□□□ -0.09
SKA3-202ENST00000314759 PCYOX1Q9UHG3 505 aa14.49□□□□□ -0.09
SKA3-202ENST00000314759 KCNJ2P63252 427 aa14.49□□□□□ -0.09
SKA3-202ENST00000314759 ADCY2Q08462 1091 aa14.49□□□□□ -0.09
SKA3-202ENST00000314759 CLUL1Q15846 466 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms