RNA–Protein interactions for RNA: ENST00000313352.11

PUF60-201, Transcript of poly(U) binding splicing factor 60, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PUF60, Length 1,804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-201ENST00000313352 CCSER1Q9C0I3 900 aa18.98■□□□□ 0.63
PUF60-201ENST00000313352 NT5C3AQ9H0P0 336 aa18.98■□□□□ 0.63
PUF60-201ENST00000313352 INO80B-WBP1J3KQ70 363 aa18.97■□□□□ 0.63
PUF60-201ENST00000313352 ATF7P17544 494 aaPredicted RBP18.97■□□□□ 0.63
PUF60-201ENST00000313352 SFPQP23246 707 aaKnown RBP eCLIP18.97■□□□□ 0.63
PUF60-201ENST00000313352 NAALADL2Q58DX5 795 aa18.97■□□□□ 0.63
PUF60-201ENST00000313352 SRGAP1Q7Z6B7 1085 aa18.97■□□□□ 0.63
PUF60-201ENST00000313352 SP7Q8TDD2 431 aaPredicted RBP18.97■□□□□ 0.63
PUF60-201ENST00000313352 ARNTL2Q8WYA1 636 aa18.97■□□□□ 0.63
PUF60-201ENST00000313352 CALML4Q96GE6 196 aa18.97■□□□□ 0.63
PUF60-201ENST00000313352 C17orf80Q9BSJ5 609 aa18.97■□□□□ 0.63
PUF60-201ENST00000313352 INO80BQ9C086 356 aaPredicted RBP18.97■□□□□ 0.63
PUF60-201ENST00000313352 RNF19AQ9NV58 838 aa18.97■□□□□ 0.63
PUF60-201ENST00000313352 LINC00271P0C7V0 271 aa18.97■□□□□ 0.63
PUF60-201ENST00000313352 ZSCAN20P17040 1043 aaPredicted RBP18.97■□□□□ 0.63
PUF60-201ENST00000313352 DDIT3P35638 169 aa18.97■□□□□ 0.63
PUF60-201ENST00000313352 PHKA2P46019 1235 aa18.97■□□□□ 0.63
PUF60-201ENST00000313352 FAM189BP81408 668 aa18.97■□□□□ 0.63
PUF60-201ENST00000313352 RNF169Q8NCN4 708 aa18.97■□□□□ 0.63
PUF60-201ENST00000313352 RASSF8Q8NHQ8 419 aa18.97■□□□□ 0.63
PUF60-201ENST00000313352 LPPQ93052 612 aa18.97■□□□□ 0.63
PUF60-201ENST00000313352 AGPAT5Q9NUQ2 364 aa18.97■□□□□ 0.63
PUF60-201ENST00000313352 REV3LO60673 3130 aa18.96■□□□□ 0.63
PUF60-201ENST00000313352 MYO9BQ13459 2157 aa18.96■□□□□ 0.63
PUF60-201ENST00000313352 TSPAN1O60635 241 aa18.96■□□□□ 0.63
PUF60-201ENST00000313352 YEATS4O95619 227 aa18.96■□□□□ 0.63
PUF60-201ENST00000313352 PDIA4P13667 645 aaKnown RBP18.96■□□□□ 0.63
PUF60-201ENST00000313352 ADGRE1Q14246 886 aa18.96■□□□□ 0.63
PUF60-201ENST00000313352 ODR4Q5SWX8 454 aa18.96■□□□□ 0.63
PUF60-201ENST00000313352 AXDND1Q5T1B0 1012 aaPredicted RBP18.96■□□□□ 0.63
PUF60-201ENST00000313352 TWF2Q6IBS0 349 aaKnown RBP18.96■□□□□ 0.63
PUF60-201ENST00000313352 SHC4Q6S5L8 630 aa18.96■□□□□ 0.63
PUF60-201ENST00000313352 ECHDC2Q86YB7 292 aa18.96■□□□□ 0.63
PUF60-201ENST00000313352 IFNLR1Q8IU57 520 aaPredicted RBP18.96■□□□□ 0.63
PUF60-201ENST00000313352 NPAS4Q8IUM7 802 aa18.96■□□□□ 0.63
PUF60-201ENST00000313352 RAD54LQ92698 747 aa18.96■□□□□ 0.63
PUF60-201ENST00000313352 PCDHB7Q9Y5E2 793 aa18.96■□□□□ 0.63
PUF60-201ENST00000313352 MORC2Q9Y6X9 1032 aaPredicted RBP18.96■□□□□ 0.63
PUF60-201ENST00000313352 TMEM265A0A087WTH1 108 aa18.95■□□□□ 0.62
PUF60-201ENST00000313352 PPP6R2O75170 966 aa18.95■□□□□ 0.62
PUF60-201ENST00000313352 LIG1P18858 919 aa18.95■□□□□ 0.62
PUF60-201ENST00000313352 TFDP1Q14186 410 aa18.95■□□□□ 0.62
PUF60-201ENST00000313352 UBXN11Q5T124 520 aa18.95■□□□□ 0.62
PUF60-201ENST00000313352 PDILTQ8N807 584 aa18.95■□□□□ 0.62
PUF60-201ENST00000313352 EIF2AQ9BY44 585 aaKnown RBP18.95■□□□□ 0.62
PUF60-201ENST00000313352 C1orf112Q9NSG2 853 aa18.95■□□□□ 0.62
PUF60-201ENST00000313352 LRFN2Q9ULH4 789 aa18.95■□□□□ 0.62
PUF60-201ENST00000313352 PCDHA7Q9UN72 937 aa18.95■□□□□ 0.62
PUF60-201ENST00000313352 PRUNE2Q8WUY3 3088 aa18.95■□□□□ 0.62
PUF60-201ENST00000313352 A0A0U1RQF3 1178 aa18.95■□□□□ 0.62
PUF60-201ENST00000313352 ARF4P18085 180 aaPredicted RBP18.95■□□□□ 0.62
PUF60-201ENST00000313352 PEX3P56589 373 aa18.95■□□□□ 0.62
PUF60-201ENST00000313352 POU5F1BQ06416 359 aa18.95■□□□□ 0.62
PUF60-201ENST00000313352 CDCA2Q69YH5 1023 aaPredicted RBP18.95■□□□□ 0.62
PUF60-201ENST00000313352 GPBP1Q86WP2 473 aa18.95■□□□□ 0.62
PUF60-201ENST00000313352 NPTX2P47972 431 aa18.94■□□□□ 0.62
PUF60-201ENST00000313352 CLLU1OSQ5K130 101 aa18.94■□□□□ 0.62
PUF60-201ENST00000313352 ZNF598Q86UK7 904 aaKnown RBP18.94■□□□□ 0.62
PUF60-201ENST00000313352 LARP4BQ92615 738 aaKnown RBP18.94■□□□□ 0.62
PUF60-201ENST00000313352 NFKBIZQ9BYH8 718 aa18.94■□□□□ 0.62
PUF60-201ENST00000313352 GDPD2Q9HCC8 539 aa18.94■□□□□ 0.62
PUF60-201ENST00000313352 FAM105AQ9NUU6 356 aa18.94■□□□□ 0.62
PUF60-201ENST00000313352 MRPL42Q9Y6G3 142 aaKnown RBP18.94■□□□□ 0.62
PUF60-201ENST00000313352 FNDC1Q4ZHG4 1894 aaPredicted RBP18.94■□□□□ 0.62
PUF60-201ENST00000313352 TCHHQ07283 1943 aa18.93■□□□□ 0.62
PUF60-201ENST00000313352 ERLIN2O94905 339 aa18.93■□□□□ 0.62
PUF60-201ENST00000313352 NCLP19338 710 aaKnown RBP18.93■□□□□ 0.62
PUF60-201ENST00000313352 GUCY2CP25092 1073 aa18.93■□□□□ 0.62
PUF60-201ENST00000313352 NAMPTP43490 491 aa18.93■□□□□ 0.62
PUF60-201ENST00000313352 BTG3Q14201 252 aaPredicted RBP18.93■□□□□ 0.62
PUF60-201ENST00000313352 TPRNQ4KMQ1 711 aa18.93■□□□□ 0.62
PUF60-201ENST00000313352 KIFAP3Q92845 792 aa18.93■□□□□ 0.62
PUF60-201ENST00000313352 REEP2Q9BRK0 252 aa18.93■□□□□ 0.62
PUF60-201ENST00000313352 CCDC113Q9H0I3 377 aa18.93■□□□□ 0.62
PUF60-201ENST00000313352 CHST12Q9NRB3 414 aa18.93■□□□□ 0.62
PUF60-201ENST00000313352 TMEM161AQ9NX61 479 aa18.93■□□□□ 0.62
PUF60-201ENST00000313352 RCOR1Q9UKL0 485 aa18.93■□□□□ 0.62
PUF60-201ENST00000313352 HES2Q9Y543 173 aa18.93■□□□□ 0.62
PUF60-201ENST00000313352 CCDC169A6NNP5 214 aa18.93■□□□□ 0.62
PUF60-201ENST00000313352 STAG3L1P0CL83 205 aa18.93■□□□□ 0.62
PUF60-201ENST00000313352 AFF1P51825 1210 aaKnown RBP18.93■□□□□ 0.62
PUF60-201ENST00000313352 RRAGBQ5VZM2 374 aa18.93■□□□□ 0.62
PUF60-201ENST00000313352 TAS1R3Q7RTX0 852 aa18.93■□□□□ 0.62
PUF60-201ENST00000313352 GDPD5Q8WTR4 605 aa18.93■□□□□ 0.62
PUF60-201ENST00000313352 STAMQ92783 540 aa18.93■□□□□ 0.62
PUF60-201ENST00000313352 FZD8Q9H461 694 aa18.93■□□□□ 0.62
PUF60-201ENST00000313352 TBKBP1A7MCY6 615 aa18.92■□□□□ 0.62
PUF60-201ENST00000313352 LPXNO60711 386 aa18.92■□□□□ 0.62
PUF60-201ENST00000313352 ME1P48163 572 aa18.92■□□□□ 0.62
PUF60-201ENST00000313352 ERVK-21P61565 698 aa18.92■□□□□ 0.62
PUF60-201ENST00000313352 GIT2Q14161 759 aa18.92■□□□□ 0.62
PUF60-201ENST00000313352 LRRC55Q6ZSA7 311 aa18.92■□□□□ 0.62
PUF60-201ENST00000313352 FIBCD1Q8N539 461 aa18.92■□□□□ 0.62
PUF60-201ENST00000313352 DEPTORQ8TB45 409 aa18.92■□□□□ 0.62
PUF60-201ENST00000313352 LEO1Q8WVC0 666 aaPredicted RBP18.92■□□□□ 0.62
PUF60-201ENST00000313352 CASD1Q96PB1 797 aa18.92■□□□□ 0.62
PUF60-201ENST00000313352 TGS1Q96RS0 853 aaKnown RBP18.92■□□□□ 0.62
PUF60-201ENST00000313352 RNF39Q9H2S5 420 aa18.92■□□□□ 0.62
PUF60-201ENST00000313352 DACT1Q9NYF0 836 aa18.92■□□□□ 0.62
PUF60-201ENST00000313352 PCDHB2Q9Y5E7 798 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms