RNA–Protein interactions for RNA: ENST00000312990.10

CDK4-202, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CDK4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-202ENST00000312990 ALCAMQ13740 583 aa20.6■□□□□ 0.89
CDK4-202ENST00000312990 TRIM71Q2Q1W2 868 aaKnown RBP20.6■□□□□ 0.89
CDK4-202ENST00000312990 COL13A1Q5TAT6 717 aaPredicted RBP20.6■□□□□ 0.89
CDK4-202ENST00000312990 C1orf53Q5VUE5 145 aa20.6■□□□□ 0.89
CDK4-202ENST00000312990 ZNF410Q86VK4 478 aa20.6■□□□□ 0.89
CDK4-202ENST00000312990 GAS2L3Q86XJ1 694 aa20.6■□□□□ 0.89
CDK4-202ENST00000312990 IFNLR1Q8IU57 520 aaPredicted RBP20.6■□□□□ 0.89
CDK4-202ENST00000312990 NME8Q8N427 588 aa20.6■□□□□ 0.89
CDK4-202ENST00000312990 MED15Q96RN5 788 aa20.6■□□□□ 0.89
CDK4-202ENST00000312990 CCDC113Q9H0I3 377 aa20.6■□□□□ 0.89
CDK4-202ENST00000312990 C11orf49Q9H6J7 331 aa20.6■□□□□ 0.89
CDK4-202ENST00000312990 MINDY3Q9H8M7 445 aa20.6■□□□□ 0.89
CDK4-202ENST00000312990 CDHR5Q9HBB8 845 aa20.6■□□□□ 0.89
CDK4-202ENST00000312990 PCDHB13Q9Y5F0 798 aa20.6■□□□□ 0.89
CDK4-202ENST00000312990 UBE4BO95155 1302 aa20.6■□□□□ 0.89
CDK4-202ENST00000312990 L1TD1Q5T7N2 865 aaKnown RBP20.59■□□□□ 0.89
CDK4-202ENST00000312990 NELFCDQ8IXH7 590 aa20.59■□□□□ 0.89
CDK4-202ENST00000312990 NLRP7Q8WX94 980 aa20.59■□□□□ 0.89
CDK4-202ENST00000312990 IKZF4Q9H2S9 585 aa20.59■□□□□ 0.89
CDK4-202ENST00000312990 KCTD10Q9H3F6 313 aa20.59■□□□□ 0.89
CDK4-202ENST00000312990 DACH1Q9UI36 760 aa20.59■□□□□ 0.89
CDK4-202ENST00000312990 TBX20Q9UMR3 447 aa20.59■□□□□ 0.89
CDK4-202ENST00000312990 CTNND2Q9UQB3 1225 aa20.59■□□□□ 0.89
CDK4-202ENST00000312990 TET1Q8NFU7 2136 aa20.59■□□□□ 0.89
CDK4-202ENST00000312990 H0YCG3 227 aa20.58■□□□□ 0.89
CDK4-202ENST00000312990 EDN1P05305 212 aa20.58■□□□□ 0.89
CDK4-202ENST00000312990 PMS1P54277 932 aaKnown RBP20.58■□□□□ 0.89
CDK4-202ENST00000312990 STIM1Q13586 685 aa20.58■□□□□ 0.89
CDK4-202ENST00000312990 STXBP4Q6ZWJ1 553 aa20.58■□□□□ 0.89
CDK4-202ENST00000312990 ANKRD33Q7Z3H0 272 aa20.58■□□□□ 0.89
CDK4-202ENST00000312990 UBE2Q1Q7Z7E8 422 aa20.58■□□□□ 0.89
CDK4-202ENST00000312990 MAP4K3Q8IVH8 894 aa20.58■□□□□ 0.89
CDK4-202ENST00000312990 SEMA6BQ9H3T3 888 aa20.58■□□□□ 0.89
CDK4-202ENST00000312990 TMEM134Q9H6X4 195 aa20.58■□□□□ 0.89
CDK4-202ENST00000312990 MROH7Q68CQ1 1323 aa20.58■□□□□ 0.89
CDK4-202ENST00000312990 PHLPP2Q6ZVD8 1323 aa20.58■□□□□ 0.89
CDK4-202ENST00000312990 TRIM49BA6NDI0 452 aa20.58■□□□□ 0.88
CDK4-202ENST00000312990 RBAK-RBAKDNI3L0D1 243 aa20.58■□□□□ 0.88
CDK4-202ENST00000312990 PSMA7O14818 248 aa20.58■□□□□ 0.88
CDK4-202ENST00000312990 PQBP1O60828 265 aaKnown RBP20.58■□□□□ 0.88
CDK4-202ENST00000312990 CSDE1O75534 798 aaKnown RBP20.58■□□□□ 0.88
CDK4-202ENST00000312990 IQCF3P0C7M6 154 aa20.58■□□□□ 0.88
CDK4-202ENST00000312990 PPP1R2P41236 205 aa20.58■□□□□ 0.88
CDK4-202ENST00000312990 PHKA2P46019 1235 aa20.58■□□□□ 0.88
CDK4-202ENST00000312990 MRPS6P82932 125 aaKnown RBP20.58■□□□□ 0.88
CDK4-202ENST00000312990 CDC42EP1Q00587 391 aa20.58■□□□□ 0.88
CDK4-202ENST00000312990 MBTD1Q05BQ5 628 aa20.58■□□□□ 0.88
CDK4-202ENST00000312990 PAK1Q13153 545 aa20.58■□□□□ 0.88
CDK4-202ENST00000312990 TRIM60Q495X7 471 aa20.58■□□□□ 0.88
CDK4-202ENST00000312990 CENPPQ6IPU0 288 aa20.58■□□□□ 0.88
CDK4-202ENST00000312990 NECAB2Q7Z6G3 386 aa20.58■□□□□ 0.88
CDK4-202ENST00000312990 RSPH3Q86UC2 560 aa20.58■□□□□ 0.88
CDK4-202ENST00000312990 ZBTB8OSQ8IWT0 167 aa20.58■□□□□ 0.88
CDK4-202ENST00000312990 NELFBQ8WX92 580 aa20.58■□□□□ 0.88
CDK4-202ENST00000312990 HVCN1Q96D96 273 aa20.58■□□□□ 0.88
CDK4-202ENST00000312990 DHTKD1Q96HY7 919 aaPredicted RBP20.58■□□□□ 0.88
CDK4-202ENST00000312990 OSMRQ99650 979 aa20.58■□□□□ 0.88
CDK4-202ENST00000312990 C2orf40Q9H1Z8 148 aa20.58■□□□□ 0.88
CDK4-202ENST00000312990 GINS2Q9Y248 185 aa20.58■□□□□ 0.88
CDK4-202ENST00000312990 K7ERI5 159 aa20.57■□□□□ 0.88
CDK4-202ENST00000312990 RPLP2P05387 115 aaKnown RBP20.57■□□□□ 0.88
CDK4-202ENST00000312990 SCP2P22307 547 aa20.57■□□□□ 0.88
CDK4-202ENST00000312990 ERCC5P28715 1186 aaPredicted RBP20.57■□□□□ 0.88
CDK4-202ENST00000312990 THPOP40225 353 aa20.57■□□□□ 0.88
CDK4-202ENST00000312990 ZNF165P49910 485 aa20.57■□□□□ 0.88
CDK4-202ENST00000312990 EFNA5P52803 228 aa20.57■□□□□ 0.88
CDK4-202ENST00000312990 MGAT3Q09327 533 aa20.57■□□□□ 0.88
CDK4-202ENST00000312990 KNOP1Q1ED39 458 aaKnown RBP20.57■□□□□ 0.88
CDK4-202ENST00000312990 ZCWPW2Q504Y3 356 aa20.57■□□□□ 0.88
CDK4-202ENST00000312990 CT47A1Q5JQC4 288 aaPredicted RBP20.57■□□□□ 0.88
CDK4-202ENST00000312990 TMEM40Q8WWA1 233 aa20.57■□□□□ 0.88
CDK4-202ENST00000312990 SCLT1Q96NL6 688 aa20.57■□□□□ 0.88
CDK4-202ENST00000312990 CDY2AQ9Y6F7 541 aa20.57■□□□□ 0.88
CDK4-202ENST00000312990 TRIP11Q15643 1979 aa20.56■□□□□ 0.88
CDK4-202ENST00000312990 KIF20AO95235 890 aa20.56■□□□□ 0.88
CDK4-202ENST00000312990 CHRNA1P02708 482 aa20.56■□□□□ 0.88
CDK4-202ENST00000312990 CTSHP09668 335 aa20.56■□□□□ 0.88
CDK4-202ENST00000312990 CCNE1P24864 410 aa20.56■□□□□ 0.88
CDK4-202ENST00000312990 STX17P56962 302 aa20.56■□□□□ 0.88
CDK4-202ENST00000312990 ZNF710Q8N1W2 664 aa20.56■□□□□ 0.88
CDK4-202ENST00000312990 P2RX5Q93086 422 aa20.56■□□□□ 0.88
CDK4-202ENST00000312990 TOX2Q96NM4 488 aa20.56■□□□□ 0.88
CDK4-202ENST00000312990 ACCSQ96QU6 501 aa20.56■□□□□ 0.88
CDK4-202ENST00000312990 BPIFA3Q9BQP9 254 aa20.56■□□□□ 0.88
CDK4-202ENST00000312990 CELF4Q9BZC1 486 aaKnown RBP20.56■□□□□ 0.88
CDK4-202ENST00000312990 NAT10Q9H0A0 1025 aaKnown RBP20.56■□□□□ 0.88
CDK4-202ENST00000312990 FZD8Q9H461 694 aa20.56■□□□□ 0.88
CDK4-202ENST00000312990 RWDD2AQ9UIY3 292 aa20.56■□□□□ 0.88
CDK4-202ENST00000312990 TTLL13PA6NNM8 815 aa20.55■□□□□ 0.88
CDK4-202ENST00000312990 INO80B-WBP1J3KQ70 363 aa20.55■□□□□ 0.88
CDK4-202ENST00000312990 TGFB1I1O43294 461 aa20.55■□□□□ 0.88
CDK4-202ENST00000312990 CAVIN2O95810 425 aa20.55■□□□□ 0.88
CDK4-202ENST00000312990 ABCD1P33897 745 aa20.55■□□□□ 0.88
CDK4-202ENST00000312990 TLE2Q04725 743 aa20.55■□□□□ 0.88
CDK4-202ENST00000312990 IQCB1Q15051 598 aa20.55■□□□□ 0.88
CDK4-202ENST00000312990 LRRC26Q2I0M4 334 aa20.55■□□□□ 0.88
CDK4-202ENST00000312990 SRGAP1Q7Z6B7 1085 aa20.55■□□□□ 0.88
CDK4-202ENST00000312990 FAM200AQ8TCP9 573 aa20.55■□□□□ 0.88
CDK4-202ENST00000312990 INO80BQ9C086 356 aaPredicted RBP20.55■□□□□ 0.88
CDK4-202ENST00000312990 CBX8Q9HC52 389 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms