RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 PMS1P54277 932 aaKnown RBP8.75□□□□□ -1.01
VPS41-202ENST00000310301 PLCB4Q15147 1175 aa8.75□□□□□ -1.01
VPS41-202ENST00000310301 FAM133AQ8N9E0 248 aa8.75□□□□□ -1.01
VPS41-202ENST00000310301 CFAP36Q96G28 342 aa8.75□□□□□ -1.01
VPS41-202ENST00000310301 RAVER2Q9HCJ3 691 aaKnown RBP8.75□□□□□ -1.01
VPS41-202ENST00000310301 HMX1Q9NP08 348 aaPredicted RBP8.75□□□□□ -1.01
VPS41-202ENST00000310301 DNAJC17Q9NVM6 304 aaKnown RBP8.75□□□□□ -1.01
VPS41-202ENST00000310301 SNAP23O00161 211 aa8.75□□□□□ -1.01
VPS41-202ENST00000310301 TTI1O43156 1089 aa8.75□□□□□ -1.01
VPS41-202ENST00000310301 SRGAP2O75044 1071 aa8.75□□□□□ -1.01
VPS41-202ENST00000310301 PSAPP07602 524 aa8.75□□□□□ -1.01
VPS41-202ENST00000310301 HOXC6P09630 235 aa8.75□□□□□ -1.01
VPS41-202ENST00000310301 SRGAP2BP0DMP2 458 aa8.75□□□□□ -1.01
VPS41-202ENST00000310301 PDIA3P30101 505 aaKnown RBP8.75□□□□□ -1.01
VPS41-202ENST00000310301 KIF11P52732 1056 aa8.75□□□□□ -1.01
VPS41-202ENST00000310301 AP2B1P63010 937 aa8.75□□□□□ -1.01
VPS41-202ENST00000310301 IGBP1P78318 339 aa8.75□□□□□ -1.01
VPS41-202ENST00000310301 MDM2Q00987 491 aaPredicted RBP8.75□□□□□ -1.01
VPS41-202ENST00000310301 ZBTB41Q5SVQ8 909 aa8.75□□□□□ -1.01
VPS41-202ENST00000310301 PI16Q6UXB8 463 aa8.75□□□□□ -1.01
VPS41-202ENST00000310301 FAM47EQ6ZV65 393 aa8.75□□□□□ -1.01
VPS41-202ENST00000310301 EEPD1Q7L9B9 569 aa8.75□□□□□ -1.01
VPS41-202ENST00000310301 ZNF653Q96CK0 615 aa8.75□□□□□ -1.01
VPS41-202ENST00000310301 STRBPQ96SI9 672 aaKnown RBP8.75□□□□□ -1.01
VPS41-202ENST00000310301 TRIM15Q9C019 465 aa8.75□□□□□ -1.01
VPS41-202ENST00000310301 TRPV6Q9H1D0 765 aa8.75□□□□□ -1.01
VPS41-202ENST00000310301 MAGOHP61326 146 aaKnown RBP8.75□□□□□ -1.01
VPS41-202ENST00000310301 SPARCL1Q14515 664 aa8.75□□□□□ -1.01
VPS41-202ENST00000310301 FAM26FQ5R3K3 315 aa8.75□□□□□ -1.01
VPS41-202ENST00000310301 PDZD4Q76G19 769 aaPredicted RBP8.75□□□□□ -1.01
VPS41-202ENST00000310301 SLC17A8Q8NDX2 589 aa8.75□□□□□ -1.01
VPS41-202ENST00000310301 TRIM55Q9BYV6 548 aa8.75□□□□□ -1.01
VPS41-202ENST00000310301 VCPKMTQ9H867 229 aa8.75□□□□□ -1.01
VPS41-202ENST00000310301 SUGCTQ9HAC7 445 aa8.75□□□□□ -1.01
VPS41-202ENST00000310301 PITPNM2Q9BZ72 1349 aa8.75□□□□□ -1.01
VPS41-202ENST00000310301 PNMA6FA0A0J9YX94 578 aa8.75□□□□□ -1.01
VPS41-202ENST00000310301 CFAP73A6NFT4 308 aa8.75□□□□□ -1.01
VPS41-202ENST00000310301 WNT10BO00744 389 aa8.75□□□□□ -1.01
VPS41-202ENST00000310301 TRIM66O15016 1216 aa8.75□□□□□ -1.01
VPS41-202ENST00000310301 POLGP54098 1239 aaPredicted RBP8.75□□□□□ -1.01
VPS41-202ENST00000310301 CYP27A1Q02318 531 aa8.75□□□□□ -1.01
VPS41-202ENST00000310301 FBXW10Q5XX13 1052 aa8.75□□□□□ -1.01
VPS41-202ENST00000310301 P2RX5Q93086 422 aa8.75□□□□□ -1.01
VPS41-202ENST00000310301 DHTKD1Q96HY7 919 aaPredicted RBP8.75□□□□□ -1.01
VPS41-202ENST00000310301 NACA2Q9H009 215 aa8.75□□□□□ -1.01
VPS41-202ENST00000310301 PCDHA12Q9UN75 941 aa8.75□□□□□ -1.01
VPS41-202ENST00000310301 AKT3Q9Y243 479 aa8.75□□□□□ -1.01
VPS41-202ENST00000310301 S100BP04271 92 aaPredicted RBP8.75□□□□□ -1.01
VPS41-202ENST00000310301 SUPT20HL2P0C7V6 817 aa8.75□□□□□ -1.01
VPS41-202ENST00000310301 DLATP10515 647 aaKnown RBP8.75□□□□□ -1.01
VPS41-202ENST00000310301 ELF1P32519 619 aa8.75□□□□□ -1.01
VPS41-202ENST00000310301 DAB2P98082 770 aa8.75□□□□□ -1.01
VPS41-202ENST00000310301 SLC30A9Q6PML9 568 aa8.75□□□□□ -1.01
VPS41-202ENST00000310301 CRLF3Q8IUI8 442 aa8.75□□□□□ -1.01
VPS41-202ENST00000310301 TRMT2AQ8IZ69 625 aaKnown RBP8.75□□□□□ -1.01
VPS41-202ENST00000310301 CNPY4Q8N129 248 aa8.75□□□□□ -1.01
VPS41-202ENST00000310301 MTA3Q9BTC8 594 aa8.75□□□□□ -1.01
VPS41-202ENST00000310301 DDX28Q9NUL7 540 aaKnown RBP8.75□□□□□ -1.01
VPS41-202ENST00000310301 SPDYE16A6NNV3 312 aaPredicted RBP8.74□□□□□ -1.01
VPS41-202ENST00000310301 SYCE1LA8MT33 242 aa8.74□□□□□ -1.01
VPS41-202ENST00000310301 PDHXO00330 501 aa8.74□□□□□ -1.01
VPS41-202ENST00000310301 STRNO43815 780 aa8.74□□□□□ -1.01
VPS41-202ENST00000310301 KRT14P02533 472 aa8.74□□□□□ -1.01
VPS41-202ENST00000310301 C6orf222P0C671 652 aaPredicted RBP8.74□□□□□ -1.01
VPS41-202ENST00000310301 GOLGA8HP0CJ92 632 aa8.74□□□□□ -1.01
VPS41-202ENST00000310301 SCG2P13521 617 aa8.74□□□□□ -1.01
VPS41-202ENST00000310301 PPP4CP60510 307 aa8.74□□□□□ -1.01
VPS41-202ENST00000310301 PPP2R2AP63151 447 aa8.74□□□□□ -1.01
VPS41-202ENST00000310301 BASP1P80723 227 aaKnown RBP8.74□□□□□ -1.01
VPS41-202ENST00000310301 ZNF658Q5TYW1 1059 aaPredicted RBP8.74□□□□□ -1.01
VPS41-202ENST00000310301 NEDD1Q8NHV4 660 aa8.74□□□□□ -1.01
VPS41-202ENST00000310301 RMDN3Q96TC7 470 aa8.74□□□□□ -1.01
VPS41-202ENST00000310301 EPC1Q9H2F5 836 aa8.74□□□□□ -1.01
VPS41-202ENST00000310301 WDR70Q9NW82 654 aa8.74□□□□□ -1.01
VPS41-202ENST00000310301 PPP1R12AO14974 1030 aaPredicted RBP8.74□□□□□ -1.01
VPS41-202ENST00000310301 NVLO15381 856 aaKnown RBP8.74□□□□□ -1.01
VPS41-202ENST00000310301 PYGBP11216 843 aa8.74□□□□□ -1.01
VPS41-202ENST00000310301 HSPA6P17066 643 aa8.74□□□□□ -1.01
VPS41-202ENST00000310301 RAP1GDS1P52306 607 aa8.74□□□□□ -1.01
VPS41-202ENST00000310301 C15orf52Q6ZUT6 534 aaKnown RBP8.74□□□□□ -1.01
VPS41-202ENST00000310301 ICA1LQ8NDH6 482 aa8.74□□□□□ -1.01
VPS41-202ENST00000310301 FBXL13Q8NEE6 735 aa8.74□□□□□ -1.01
VPS41-202ENST00000310301 NACC1Q96RE7 527 aa8.74□□□□□ -1.01
VPS41-202ENST00000310301 IPO11Q9UI26 975 aaKnown RBP8.74□□□□□ -1.01
VPS41-202ENST00000310301 STRIP2Q9ULQ0 834 aa8.74□□□□□ -1.01
VPS41-202ENST00000310301 LRP6O75581 1613 aa8.74□□□□□ -1.01
VPS41-202ENST00000310301 MCF2LO15068 1137 aa8.74□□□□□ -1.01
VPS41-202ENST00000310301 KPNA6O60684 536 aa8.74□□□□□ -1.01
VPS41-202ENST00000310301 CAP2P40123 477 aa8.74□□□□□ -1.01
VPS41-202ENST00000310301 MFAP3P55082 362 aa8.74□□□□□ -1.01
VPS41-202ENST00000310301 CDC42EP1Q00587 391 aa8.74□□□□□ -1.01
VPS41-202ENST00000310301 PRPSAP1Q14558 356 aa8.74□□□□□ -1.01
VPS41-202ENST00000310301 MAN2A1Q16706 1144 aa8.74□□□□□ -1.01
VPS41-202ENST00000310301 CRY2Q49AN0 593 aa8.74□□□□□ -1.01
VPS41-202ENST00000310301 GLE1Q53GS7 698 aaKnown RBP8.74□□□□□ -1.01
VPS41-202ENST00000310301 XKR9Q5GH70 373 aa8.74□□□□□ -1.01
VPS41-202ENST00000310301 DACT2Q5SW24 774 aa8.74□□□□□ -1.01
VPS41-202ENST00000310301 CCDC127Q96BQ5 260 aa8.74□□□□□ -1.01
VPS41-202ENST00000310301 NUDCD1Q96RS6 583 aa8.74□□□□□ -1.01
VPS41-202ENST00000310301 RNF208Q9H0X6 261 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms