RNA–Protein interactions for RNA: ENST00000309996.6

SPTBN2-201, Transcript of spectrin beta, non-erythrocytic 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN2, Length 7,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2-201ENST00000309996 USP17L3A6NCW0 530 aa13.66□□□□□ -0.22
SPTBN2-201ENST00000309996 USP17L4A6NCW7 530 aa13.66□□□□□ -0.22
SPTBN2-201ENST00000309996 NBNO60934 754 aa13.66□□□□□ -0.22
SPTBN2-201ENST00000309996 APOA1P02647 267 aa13.66□□□□□ -0.22
SPTBN2-201ENST00000309996 SYDE2Q5VT97 1194 aa13.66□□□□□ -0.22
SPTBN2-201ENST00000309996 USP17L1Q7RTZ2 530 aa13.66□□□□□ -0.22
SPTBN2-201ENST00000309996 ZNF507Q8TCN5 953 aa13.66□□□□□ -0.22
SPTBN2-201ENST00000309996 ELAC2Q9BQ52 826 aaKnown RBP13.66□□□□□ -0.22
SPTBN2-201ENST00000309996 MAN1B1Q9UKM7 699 aa13.66□□□□□ -0.22
SPTBN2-201ENST00000309996 XDHP47989 1333 aa13.66□□□□□ -0.22
SPTBN2-201ENST00000309996 PDHA1P08559 390 aa13.66□□□□□ -0.22
SPTBN2-201ENST00000309996 RASSF3Q86WH2 238 aa13.66□□□□□ -0.22
SPTBN2-201ENST00000309996 RNF26Q9BY78 433 aaPredicted RBP13.66□□□□□ -0.22
SPTBN2-201ENST00000309996 CYP26B1Q9NR63 512 aa13.66□□□□□ -0.22
SPTBN2-201ENST00000309996 CCDC195A0A1B0GUA6 201 aa13.66□□□□□ -0.22
SPTBN2-201ENST00000309996 MMEP08473 750 aa13.66□□□□□ -0.22
SPTBN2-201ENST00000309996 BMP3P12645 472 aa13.66□□□□□ -0.22
SPTBN2-201ENST00000309996 FAM117BQ6P1L5 589 aa13.66□□□□□ -0.22
SPTBN2-201ENST00000309996 BTBD6Q96KE9 485 aa13.66□□□□□ -0.22
SPTBN2-201ENST00000309996 KRT38O76015 456 aa13.66□□□□□ -0.22
SPTBN2-201ENST00000309996 ZCWPW1Q9H0M4 648 aa13.66□□□□□ -0.22
SPTBN2-201ENST00000309996 PLXNC1O60486 1568 aa13.66□□□□□ -0.22
SPTBN2-201ENST00000309996 DYRK3O43781 588 aa13.66□□□□□ -0.22
SPTBN2-201ENST00000309996 TNFAIP2Q03169 654 aa13.66□□□□□ -0.22
SPTBN2-201ENST00000309996 TBL3Q12788 808 aaKnown RBP13.66□□□□□ -0.22
SPTBN2-201ENST00000309996 CIAPIN1Q6FI81 312 aa13.66□□□□□ -0.22
SPTBN2-201ENST00000309996 ZNF438Q7Z4V0 828 aa13.66□□□□□ -0.22
SPTBN2-201ENST00000309996 GCOM2Q9BZD3 368 aaPredicted RBP13.66□□□□□ -0.22
SPTBN2-201ENST00000309996 MTMR6Q9Y217 621 aa13.66□□□□□ -0.22
SPTBN2-201ENST00000309996 PLA2G4BP0C869 781 aa13.66□□□□□ -0.22
SPTBN2-201ENST00000309996 IRF1P10914 325 aa13.66□□□□□ -0.22
SPTBN2-201ENST00000309996 VCAM1P19320 739 aa13.66□□□□□ -0.22
SPTBN2-201ENST00000309996 SLC16A2P36021 539 aa13.66□□□□□ -0.22
SPTBN2-201ENST00000309996 EMILIN3Q9NT22 766 aa13.66□□□□□ -0.22
SPTBN2-201ENST00000309996 SYNGAP1Q96PV0 1343 aa13.65□□□□□ -0.22
SPTBN2-201ENST00000309996 CCDC78A2IDD5 438 aa13.65□□□□□ -0.22
SPTBN2-201ENST00000309996 GOLGA8MH3BSY2 632 aa13.65□□□□□ -0.22
SPTBN2-201ENST00000309996 SERPINB10P48595 397 aa13.65□□□□□ -0.22
SPTBN2-201ENST00000309996 MRPS15P82914 257 aaKnown RBP13.65□□□□□ -0.22
SPTBN2-201ENST00000309996 HAUS6Q7Z4H7 955 aa13.65□□□□□ -0.22
SPTBN2-201ENST00000309996 FGD2Q7Z6J4 655 aa13.65□□□□□ -0.22
SPTBN2-201ENST00000309996 HS6ST3Q8IZP7 471 aa13.65□□□□□ -0.22
SPTBN2-201ENST00000309996 KRT78Q8N1N4 520 aa13.65□□□□□ -0.22
SPTBN2-201ENST00000309996 TDRD7Q8NHU6 1098 aaKnown RBP13.65□□□□□ -0.22
SPTBN2-201ENST00000309996 TADA1Q96BN2 335 aa13.65□□□□□ -0.22
SPTBN2-201ENST00000309996 THAP9Q9H5L6 903 aa13.65□□□□□ -0.22
SPTBN2-201ENST00000309996 SPTLC3Q9NUV7 552 aa13.65□□□□□ -0.22
SPTBN2-201ENST00000309996 DBNLQ9UJU6 430 aaKnown RBP13.65□□□□□ -0.22
SPTBN2-201ENST00000309996 SH3BP1Q9Y3L3 701 aa13.65□□□□□ -0.22
SPTBN2-201ENST00000309996 UGGT2Q9NYU1 1516 aa13.65□□□□□ -0.22
SPTBN2-201ENST00000309996 F5H423 210 aaPredicted RBP13.65□□□□□ -0.22
SPTBN2-201ENST00000309996 PHKA2P46019 1235 aa13.65□□□□□ -0.22
SPTBN2-201ENST00000309996 DIS3Q9Y2L1 958 aaKnown RBP13.65□□□□□ -0.22
SPTBN2-201ENST00000309996 ARHGEF7Q14155 803 aa13.65□□□□□ -0.22
SPTBN2-201ENST00000309996 LRRC8BQ6P9F7 803 aa13.65□□□□□ -0.22
SPTBN2-201ENST00000309996 KIAA2013Q8IYS2 634 aa13.65□□□□□ -0.22
SPTBN2-201ENST00000309996 VPS11Q9H270 941 aa13.65□□□□□ -0.22
SPTBN2-201ENST00000309996 ZNF229Q9UJW7 825 aa13.65□□□□□ -0.22
SPTBN2-201ENST00000309996 ABCA10Q8WWZ4 1543 aa13.65□□□□□ -0.22
SPTBN2-201ENST00000309996 RASSF10A6NK89 507 aa13.65□□□□□ -0.22
SPTBN2-201ENST00000309996 H0Y3Z8 333 aa13.65□□□□□ -0.22
SPTBN2-201ENST00000309996 TBC1D1Q86TI0 1168 aaPredicted RBP13.65□□□□□ -0.22
SPTBN2-201ENST00000309996 NCKAP1LP55160 1127 aa13.65□□□□□ -0.22
SPTBN2-201ENST00000309996 LAMC3Q9Y6N6 1575 aa13.65□□□□□ -0.22
SPTBN2-201ENST00000309996 CDC37Q16543 378 aaPredicted RBP13.65□□□□□ -0.23
SPTBN2-201ENST00000309996 PPP4R3CPQ6ZMV5 832 aa13.65□□□□□ -0.23
SPTBN2-201ENST00000309996 RHOT2Q8IXI1 618 aa13.65□□□□□ -0.23
SPTBN2-201ENST00000309996 DDIASQ8IXT1 998 aa13.65□□□□□ -0.23
SPTBN2-201ENST00000309996 MUC3BQ9H195 1237 aa13.65□□□□□ -0.23
SPTBN2-201ENST00000309996 DDX28Q9NUL7 540 aaKnown RBP13.65□□□□□ -0.23
SPTBN2-201ENST00000309996 ANAPC7Q9UJX3 599 aa13.65□□□□□ -0.23
SPTBN2-201ENST00000309996 PRG3Q9Y2Y8 225 aaPredicted RBP13.65□□□□□ -0.23
SPTBN2-201ENST00000309996 CFAP43Q8NDM7 1665 aa13.65□□□□□ -0.23
SPTBN2-201ENST00000309996 KDM1AO60341 852 aa13.64□□□□□ -0.23
SPTBN2-201ENST00000309996 LDHAP00338 332 aaKnown RBP13.64□□□□□ -0.23
SPTBN2-201ENST00000309996 RASGRF1Q13972 1273 aa13.64□□□□□ -0.23
SPTBN2-201ENST00000309996 ZNF235Q14590 738 aa13.64□□□□□ -0.23
SPTBN2-201ENST00000309996 RTKN2Q8IZC4 609 aa13.64□□□□□ -0.23
SPTBN2-201ENST00000309996 EML4Q9HC35 981 aaKnown RBP13.64□□□□□ -0.23
SPTBN2-201ENST00000309996 ASNSD1Q9NWL6 643 aa13.64□□□□□ -0.23
SPTBN2-201ENST00000309996 USE1Q9NZ43 259 aa13.64□□□□□ -0.23
SPTBN2-201ENST00000309996 BLMP54132 1417 aaPredicted RBP13.64□□□□□ -0.23
SPTBN2-201ENST00000309996 COL17A1Q9UMD9 1497 aaPredicted RBP13.64□□□□□ -0.23
SPTBN2-201ENST00000309996 RBM41Q96IZ5 413 aaKnown RBP13.64□□□□□ -0.23
SPTBN2-201ENST00000309996 MFSD1Q9H3U5 465 aa13.64□□□□□ -0.23
SPTBN2-201ENST00000309996 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.64□□□□□ -0.23
SPTBN2-201ENST00000309996 NFU1Q9UMS0 254 aa13.64□□□□□ -0.23
SPTBN2-201ENST00000309996 FAM32AQ9Y421 112 aaKnown RBP13.64□□□□□ -0.23
SPTBN2-201ENST00000309996 ANKRD40Q6AI12 368 aa13.64□□□□□ -0.23
SPTBN2-201ENST00000309996 KANSL2Q9H9L4 492 aa13.64□□□□□ -0.23
SPTBN2-201ENST00000309996 PLAAQ9Y263 795 aa13.64□□□□□ -0.23
SPTBN2-201ENST00000309996 P4HA2O15460 535 aa13.64□□□□□ -0.23
SPTBN2-201ENST00000309996 CCDC142Q17RM4 750 aa13.64□□□□□ -0.23
SPTBN2-201ENST00000309996 NRBP1Q9UHY1 535 aa13.64□□□□□ -0.23
SPTBN2-201ENST00000309996 PCDHB7Q9Y5E2 793 aa13.64□□□□□ -0.23
SPTBN2-201ENST00000309996 GOLGA8IPA6NC78 632 aa13.64□□□□□ -0.23
SPTBN2-201ENST00000309996 GOLGA8JA6NMD2 632 aa13.64□□□□□ -0.23
SPTBN2-201ENST00000309996 LRRIQ3A6PVS8 624 aaPredicted RBP13.64□□□□□ -0.23
SPTBN2-201ENST00000309996 CHL1O00533 1208 aa13.64□□□□□ -0.23
SPTBN2-201ENST00000309996 FGGP02679 453 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms