RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 STK33Q9BYT3 514 aa12.01□□□□□ -0.49
PTPN7-201ENST00000309017 BCAS3Q9H6U6 928 aa12.01□□□□□ -0.49
PTPN7-201ENST00000309017 NKIRAS1Q9NYS0 192 aa12.01□□□□□ -0.49
PTPN7-201ENST00000309017 C6orf229H3BNL8 230 aa12.01□□□□□ -0.49
PTPN7-201ENST00000309017 DDX3YO15523 660 aaKnown RBP12.01□□□□□ -0.49
PTPN7-201ENST00000309017 FTLP02792 175 aaPredicted RBP12.01□□□□□ -0.49
PTPN7-201ENST00000309017 MARCKSL1P49006 195 aa12.01□□□□□ -0.49
PTPN7-201ENST00000309017 TRIP13Q15645 432 aaPredicted RBP12.01□□□□□ -0.49
PTPN7-201ENST00000309017 INTS8Q75QN2 995 aaKnown RBP12.01□□□□□ -0.49
PTPN7-201ENST00000309017 VSIG1Q86XK7 387 aa12.01□□□□□ -0.49
PTPN7-201ENST00000309017 ZDHHC18Q9NUE0 388 aa12.01□□□□□ -0.49
PTPN7-201ENST00000309017 A0A1W2PRG0 241 aa12□□□□□ -0.49
PTPN7-201ENST00000309017 ANKRD62A6NC57 917 aa12□□□□□ -0.49
PTPN7-201ENST00000309017 GNPATO15228 680 aa12□□□□□ -0.49
PTPN7-201ENST00000309017 SNX3O60493 162 aa12□□□□□ -0.49
PTPN7-201ENST00000309017 PPP1R11O60927 126 aaPredicted RBP12□□□□□ -0.49
PTPN7-201ENST00000309017 FMO5P49326 533 aa12□□□□□ -0.49
PTPN7-201ENST00000309017 UBAP2Q5T6F2 1119 aaKnown RBP12□□□□□ -0.49
PTPN7-201ENST00000309017 PPP1R18Q6NYC8 613 aa12□□□□□ -0.49
PTPN7-201ENST00000309017 PIGWQ7Z7B1 504 aa12□□□□□ -0.49
PTPN7-201ENST00000309017 RGL1Q9NZL6 768 aa12□□□□□ -0.49
PTPN7-201ENST00000309017 SLC12A4Q9UP95 1085 aa12□□□□□ -0.49
PTPN7-201ENST00000309017 ATP5DP30049 168 aa12□□□□□ -0.49
PTPN7-201ENST00000309017 GBP1P32455 592 aa12□□□□□ -0.49
PTPN7-201ENST00000309017 ARHGAP4P98171 946 aa12□□□□□ -0.49
PTPN7-201ENST00000309017 CETN1Q12798 172 aa12□□□□□ -0.49
PTPN7-201ENST00000309017 CNGA2Q16280 664 aa12□□□□□ -0.49
PTPN7-201ENST00000309017 FAM47EQ6ZV65 393 aa12□□□□□ -0.49
PTPN7-201ENST00000309017 TRMT1LQ7Z2T5 733 aaKnown RBP12□□□□□ -0.49
PTPN7-201ENST00000309017 RHOT2Q8IXI1 618 aa12□□□□□ -0.49
PTPN7-201ENST00000309017 RUSC1Q9BVN2 902 aa12□□□□□ -0.49
PTPN7-201ENST00000309017 SIX2Q9NPC8 291 aa12□□□□□ -0.49
PTPN7-201ENST00000309017 USP40Q9NVE5 1235 aa12□□□□□ -0.49
PTPN7-201ENST00000309017 ZNF335Q9H4Z2 1342 aaPredicted RBP12□□□□□ -0.49
PTPN7-201ENST00000309017 DLEC1Q9Y238 1755 aa12□□□□□ -0.49
PTPN7-201ENST00000309017 A8MUI8 341 aa12□□□□□ -0.49
PTPN7-201ENST00000309017 ATMINO43313 823 aaPredicted RBP12□□□□□ -0.49
PTPN7-201ENST00000309017 RIPK2O43353 540 aa12□□□□□ -0.49
PTPN7-201ENST00000309017 BCRP11274 1271 aa12□□□□□ -0.49
PTPN7-201ENST00000309017 HSPA6P17066 643 aa12□□□□□ -0.49
PTPN7-201ENST00000309017 QRICH1Q2TAL8 776 aa12□□□□□ -0.49
PTPN7-201ENST00000309017 GPATCH4Q5T3I0 446 aaKnown RBP12□□□□□ -0.49
PTPN7-201ENST00000309017 MAEAQ7L5Y9 396 aa12□□□□□ -0.49
PTPN7-201ENST00000309017 SPATA21Q7Z572 469 aa12□□□□□ -0.49
PTPN7-201ENST00000309017 GBP7Q8N8V2 638 aaPredicted RBP12□□□□□ -0.49
PTPN7-201ENST00000309017 FBF1Q8TES7 1133 aa12□□□□□ -0.49
PTPN7-201ENST00000309017 SEC14L1Q92503 715 aa12□□□□□ -0.49
PTPN7-201ENST00000309017 INTS2Q9H0H0 1204 aaKnown RBP12□□□□□ -0.49
PTPN7-201ENST00000309017 UBE2TQ9NPD8 197 aaPredicted RBP12□□□□□ -0.49
PTPN7-201ENST00000309017 ITGB4P16144 1822 aa11.99□□□□□ -0.49
PTPN7-201ENST00000309017 MIF4GDA9UHW6 222 aaKnown RBP11.99□□□□□ -0.49
PTPN7-201ENST00000309017 THAP12O43422 761 aa11.99□□□□□ -0.49
PTPN7-201ENST00000309017 ECEL1O95672 775 aa11.99□□□□□ -0.49
PTPN7-201ENST00000309017 BRAFP15056 766 aa11.99□□□□□ -0.49
PTPN7-201ENST00000309017 SLC8A3P57103 927 aa11.99□□□□□ -0.49
PTPN7-201ENST00000309017 COPS2P61201 443 aa11.99□□□□□ -0.49
PTPN7-201ENST00000309017 NCALDP61601 193 aa11.99□□□□□ -0.49
PTPN7-201ENST00000309017 POU5F1Q01860 360 aaKnown RBP11.99□□□□□ -0.49
PTPN7-201ENST00000309017 AUHQ13825 339 aaKnown RBP11.99□□□□□ -0.49
PTPN7-201ENST00000309017 CTTNQ14247 550 aaKnown RBP11.99□□□□□ -0.49
PTPN7-201ENST00000309017 GRIPAP1Q4V328 841 aa11.99□□□□□ -0.49
PTPN7-201ENST00000309017 ZDHHC24Q6UX98 284 aa11.99□□□□□ -0.49
PTPN7-201ENST00000309017 PALB2Q86YC2 1186 aa11.99□□□□□ -0.49
PTPN7-201ENST00000309017 RPGRQ92834 1020 aaKnown RBP11.99□□□□□ -0.49
PTPN7-201ENST00000309017 DDX23Q9BUQ8 820 aaKnown RBP11.99□□□□□ -0.49
PTPN7-201ENST00000309017 PNMA3Q9UL41 463 aa11.99□□□□□ -0.49
PTPN7-201ENST00000309017 CCDC88AQ3V6T2 1871 aa11.99□□□□□ -0.49
PTPN7-201ENST00000309017 AFF2P51816 1311 aa11.99□□□□□ -0.49
PTPN7-201ENST00000309017 RPTORQ8N122 1335 aa11.99□□□□□ -0.49
PTPN7-201ENST00000309017 SNED1Q8TER0 1413 aa11.99□□□□□ -0.49
PTPN7-201ENST00000309017 SLC16A3O15427 465 aaKnown RBP11.99□□□□□ -0.49
PTPN7-201ENST00000309017 HIP1RO75146 1068 aa11.99□□□□□ -0.49
PTPN7-201ENST00000309017 CHRM1P11229 460 aaPredicted RBP11.99□□□□□ -0.49
PTPN7-201ENST00000309017 JAM2P57087 298 aa11.99□□□□□ -0.49
PTPN7-201ENST00000309017 TAF11Q15544 211 aa11.99□□□□□ -0.49
PTPN7-201ENST00000309017 SPDYCQ5MJ68 293 aa11.99□□□□□ -0.49
PTPN7-201ENST00000309017 CAPRIN2Q6IMN6 1127 aaKnown RBP11.99□□□□□ -0.49
PTPN7-201ENST00000309017 CRELD2Q6UXH1 353 aaPredicted RBP11.99□□□□□ -0.49
PTPN7-201ENST00000309017 FAM178BQ8IXR5 827 aa11.99□□□□□ -0.49
PTPN7-201ENST00000309017 SPICE1Q8N0Z3 855 aa11.99□□□□□ -0.49
PTPN7-201ENST00000309017 PRELID2Q8N945 189 aa11.99□□□□□ -0.49
PTPN7-201ENST00000309017 SYT2Q8N9I0 419 aaPredicted RBP11.99□□□□□ -0.49
PTPN7-201ENST00000309017 LINC00116Q8NCU8 138 aa11.99□□□□□ -0.49
PTPN7-201ENST00000309017 ZNF622Q969S3 477 aaKnown RBP eCLIP11.99□□□□□ -0.491e-6■■□□□ 13.3
PTPN7-201ENST00000309017 TGS1Q96RS0 853 aaKnown RBP11.99□□□□□ -0.49
PTPN7-201ENST00000309017 ETNK1Q9HBU6 452 aa11.99□□□□□ -0.49
PTPN7-201ENST00000309017 CD209Q9NNX6 404 aa11.99□□□□□ -0.49
PTPN7-201ENST00000309017 ASTN1O14525 1302 aa11.99□□□□□ -0.49
PTPN7-201ENST00000309017 FOXO6A8MYZ6 492 aa11.99□□□□□ -0.49
PTPN7-201ENST00000309017 COMTP21964 271 aa11.99□□□□□ -0.49
PTPN7-201ENST00000309017 COG2Q14746 738 aa11.99□□□□□ -0.49
PTPN7-201ENST00000309017 SETDB1Q15047 1291 aa11.99□□□□□ -0.49
PTPN7-201ENST00000309017 SLC10A5Q5PT55 438 aa11.99□□□□□ -0.49
PTPN7-201ENST00000309017 HYIQ5T013 277 aa11.99□□□□□ -0.49
PTPN7-201ENST00000309017 ZFYVE27Q5T4F4 411 aa11.99□□□□□ -0.49
PTPN7-201ENST00000309017 NSMFQ6X4W1 530 aa11.99□□□□□ -0.49
PTPN7-201ENST00000309017 STXBP4Q6ZWJ1 553 aa11.99□□□□□ -0.49
PTPN7-201ENST00000309017 SLC20A1Q8WUM9 679 aa11.99□□□□□ -0.49
PTPN7-201ENST00000309017 ADAM7Q9H2U9 754 aa11.99□□□□□ -0.49
PTPN7-201ENST00000309017 BATF3Q9NR55 127 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms