RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 LPPQ93052 612 aa22.09■■□□□ 1.13
PDZRN3-202ENST00000308537 TUFT1Q9NNX1 390 aa22.09■■□□□ 1.13
PDZRN3-202ENST00000308537 PCDHB6Q9Y5E3 794 aa22.09■■□□□ 1.13
PDZRN3-202ENST00000308537 H3BQ06 376 aaPredicted RBP22.08■■□□□ 1.13
PDZRN3-202ENST00000308537 FSCN2O14926 492 aa22.08■■□□□ 1.13
PDZRN3-202ENST00000308537 LINC01565O15544 149 aa22.08■■□□□ 1.13
PDZRN3-202ENST00000308537 ASAP2O43150 1006 aa22.08■■□□□ 1.13
PDZRN3-202ENST00000308537 TBX10O75333 385 aa22.08■■□□□ 1.13
PDZRN3-202ENST00000308537 CSPG5O95196 566 aa22.08■■□□□ 1.13
PDZRN3-202ENST00000308537 RPA1P27694 616 aa22.08■■□□□ 1.13
PDZRN3-202ENST00000308537 PBX3P40426 434 aa22.08■■□□□ 1.13
PDZRN3-202ENST00000308537 FXR2P51116 673 aaKnown RBP eCLIP22.08■■□□□ 1.13
PDZRN3-202ENST00000308537 ERVFC1P60507 584 aa22.08■■□□□ 1.13
PDZRN3-202ENST00000308537 UBE3AQ05086 875 aa22.08■■□□□ 1.13
PDZRN3-202ENST00000308537 POU5F1BQ06416 359 aa22.08■■□□□ 1.13
PDZRN3-202ENST00000308537 CAPSQ13938 189 aa22.08■■□□□ 1.13
PDZRN3-202ENST00000308537 TWF2Q6IBS0 349 aaKnown RBP22.08■■□□□ 1.13
PDZRN3-202ENST00000308537 POTEGQ6S5H5 508 aa22.08■■□□□ 1.13
PDZRN3-202ENST00000308537 CD320Q9NPF0 282 aa22.08■■□□□ 1.13
PDZRN3-202ENST00000308537 B4GALT3O60512 393 aa22.07■■□□□ 1.12
PDZRN3-202ENST00000308537 IL9P15248 144 aa22.07■■□□□ 1.12
PDZRN3-202ENST00000308537 LAG3P18627 525 aa22.07■■□□□ 1.12
PDZRN3-202ENST00000308537 PLCB3Q01970 1234 aa22.07■■□□□ 1.12
PDZRN3-202ENST00000308537 IL17AQ16552 155 aa22.07■■□□□ 1.12
PDZRN3-202ENST00000308537 KCNT2Q6UVM3 1135 aa22.07■■□□□ 1.12
PDZRN3-202ENST00000308537 AGMOQ6ZNB7 445 aa22.07■■□□□ 1.12
PDZRN3-202ENST00000308537 MRPL10Q7Z7H8 261 aaKnown RBP22.07■■□□□ 1.12
PDZRN3-202ENST00000308537 RNF169Q8NCN4 708 aa22.07■■□□□ 1.12
PDZRN3-202ENST00000308537 DBR1Q9UK59 544 aaKnown RBP22.07■■□□□ 1.12
PDZRN3-202ENST00000308537 PCDHB12Q9Y5F1 795 aa22.07■■□□□ 1.12
PDZRN3-202ENST00000308537 GRXCR2A6NFK2 248 aa22.06■■□□□ 1.12
PDZRN3-202ENST00000308537 TSPAN1O60635 241 aa22.06■■□□□ 1.12
PDZRN3-202ENST00000308537 MBTD1Q05BQ5 628 aa22.06■■□□□ 1.12
PDZRN3-202ENST00000308537 ADAM15Q13444 863 aa22.06■■□□□ 1.12
PDZRN3-202ENST00000308537 MXD4Q14582 209 aaPredicted RBP22.06■■□□□ 1.12
PDZRN3-202ENST00000308537 IGSF22Q8N9C0 903 aa22.06■■□□□ 1.12
PDZRN3-202ENST00000308537 NFKBIZQ9BYH8 718 aa22.06■■□□□ 1.12
PDZRN3-202ENST00000308537 GPRC5CQ9NQ84 441 aa22.06■■□□□ 1.12
PDZRN3-202ENST00000308537 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.06■■□□□ 1.12
PDZRN3-202ENST00000308537 AAASQ9NRG9 546 aa22.06■■□□□ 1.12
PDZRN3-202ENST00000308537 CLDND1Q9NY35 253 aa22.06■■□□□ 1.12
PDZRN3-202ENST00000308537 USO1O60763 962 aaKnown RBP22.05■■□□□ 1.12
PDZRN3-202ENST00000308537 OFD1O75665 1012 aa22.05■■□□□ 1.12
PDZRN3-202ENST00000308537 GLP2RO95838 553 aa22.05■■□□□ 1.12
PDZRN3-202ENST00000308537 GJB2P29033 226 aa22.05■■□□□ 1.12
PDZRN3-202ENST00000308537 RAB27AP51159 221 aa22.05■■□□□ 1.12
PDZRN3-202ENST00000308537 AFF1P51825 1210 aaKnown RBP22.05■■□□□ 1.12
PDZRN3-202ENST00000308537 PTGDRQ13258 359 aa22.05■■□□□ 1.12
PDZRN3-202ENST00000308537 CSPP1Q1MSJ5 1256 aa22.05■■□□□ 1.12
PDZRN3-202ENST00000308537 LONRF3Q496Y0 759 aa22.05■■□□□ 1.12
PDZRN3-202ENST00000308537 TMEM173Q86WV6 379 aaPredicted RBP22.05■■□□□ 1.12
PDZRN3-202ENST00000308537 SLC39A11Q8N1S5 342 aa22.05■■□□□ 1.12
PDZRN3-202ENST00000308537 LZTS1Q9Y250 596 aa22.05■■□□□ 1.12
PDZRN3-202ENST00000308537 PCDHB2Q9Y5E7 798 aa22.05■■□□□ 1.12
PDZRN3-202ENST00000308537 NCK2O43639 380 aa22.04■■□□□ 1.12
PDZRN3-202ENST00000308537 KCNC3Q14003 757 aa22.04■■□□□ 1.12
PDZRN3-202ENST00000308537 SPOUT1Q5T280 376 aaKnown RBP22.04■■□□□ 1.12
PDZRN3-202ENST00000308537 PTCRAQ6ISU1 281 aaPredicted RBP22.04■■□□□ 1.12
PDZRN3-202ENST00000308537 FAM178BQ8IXR5 827 aa22.04■■□□□ 1.12
PDZRN3-202ENST00000308537 THNSL1Q8IYQ7 743 aa22.04■■□□□ 1.12
PDZRN3-202ENST00000308537 ABI1Q8IZP0 508 aa22.04■■□□□ 1.12
PDZRN3-202ENST00000308537 SMG8Q8ND04 991 aaKnown RBP22.04■■□□□ 1.12
PDZRN3-202ENST00000308537 VN1R2Q8NFZ6 395 aa22.04■■□□□ 1.12
PDZRN3-202ENST00000308537 MRPS27Q92552 414 aaKnown RBP22.04■■□□□ 1.12
PDZRN3-202ENST00000308537 KHSRPQ92945 711 aaKnown RBP eCLIP22.04■■□□□ 1.12
PDZRN3-202ENST00000308537 MSLNLQ96KJ4 702 aa22.04■■□□□ 1.12
PDZRN3-202ENST00000308537 NACC1Q96RE7 527 aa22.04■■□□□ 1.12
PDZRN3-202ENST00000308537 POLR3FQ9H1D9 316 aaPredicted RBP22.04■■□□□ 1.12
PDZRN3-202ENST00000308537 UPF2Q9HAU5 1272 aaKnown RBP22.04■■□□□ 1.12
PDZRN3-202ENST00000308537 TLR9Q9NR96 1032 aa22.04■■□□□ 1.12
PDZRN3-202ENST00000308537 TBC1D13Q9NVG8 400 aa22.04■■□□□ 1.12
PDZRN3-202ENST00000308537 CLEC1BQ9P126 229 aa22.04■■□□□ 1.12
PDZRN3-202ENST00000308537 NOL7Q9UMY1 257 aaKnown RBP22.04■■□□□ 1.12
PDZRN3-202ENST00000308537 MUTP22033 750 aa22.03■■□□□ 1.12
PDZRN3-202ENST00000308537 MCM2P49736 904 aa22.03■■□□□ 1.12
PDZRN3-202ENST00000308537 PCBP1Q15365 356 aaKnown RBP eCLIP22.03■■□□□ 1.12
PDZRN3-202ENST00000308537 EFHBQ8N7U6 833 aa22.03■■□□□ 1.12
PDZRN3-202ENST00000308537 BSNDQ8WZ55 320 aa22.03■■□□□ 1.12
PDZRN3-202ENST00000308537 ZNF558Q96NG5 402 aa22.03■■□□□ 1.12
PDZRN3-202ENST00000308537 EIF2AQ9BY44 585 aaKnown RBP22.03■■□□□ 1.12
PDZRN3-202ENST00000308537 MRPL9Q9BYD2 267 aaKnown RBP22.03■■□□□ 1.12
PDZRN3-202ENST00000308537 NRDE2Q9H7Z3 1164 aa22.03■■□□□ 1.12
PDZRN3-202ENST00000308537 SKIP12755 728 aa22.02■■□□□ 1.12
PDZRN3-202ENST00000308537 RBM10P98175 930 aaKnown RBP22.02■■□□□ 1.12
PDZRN3-202ENST00000308537 GNL2Q13823 731 aaKnown RBP22.02■■□□□ 1.12
PDZRN3-202ENST00000308537 PDIA5Q14554 519 aa22.02■■□□□ 1.12
PDZRN3-202ENST00000308537 CDCA2Q69YH5 1023 aaPredicted RBP22.02■■□□□ 1.12
PDZRN3-202ENST00000308537 BCL7CQ8WUZ0 217 aaPredicted RBP22.02■■□□□ 1.12
PDZRN3-202ENST00000308537 RSPH1Q8WYR4 309 aa22.02■■□□□ 1.12
PDZRN3-202ENST00000308537 MMTAG2Q9BU76 263 aaKnown RBP22.02■■□□□ 1.12
PDZRN3-202ENST00000308537 PP2D1A8MPX8 630 aa22.01■■□□□ 1.11
PDZRN3-202ENST00000308537 INPPL1O15357 1258 aa22.01■■□□□ 1.11
PDZRN3-202ENST00000308537 B4GALT5O43286 388 aa22.01■■□□□ 1.11
PDZRN3-202ENST00000308537 ARF4P18085 180 aaPredicted RBP22.01■■□□□ 1.11
PDZRN3-202ENST00000308537 NCLP19338 710 aaKnown RBP22.01■■□□□ 1.11
PDZRN3-202ENST00000308537 NRIP1P48552 1158 aa22.01■■□□□ 1.11
PDZRN3-202ENST00000308537 BCAR1P56945 870 aa22.01■■□□□ 1.11
PDZRN3-202ENST00000308537 CUL4AQ13619 759 aa22.01■■□□□ 1.11
PDZRN3-202ENST00000308537 NOMO2Q5JPE7 1267 aa22.01■■□□□ 1.11
PDZRN3-202ENST00000308537 PADI6Q6TGC4 694 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms