RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 PREPLQ4J6C6 727 aaPredicted RBP8.92□□□□□ -0.98
PCDHB1-201ENST00000306549 DEFB132Q7Z7B7 95 aa8.92□□□□□ -0.98
PCDHB1-201ENST00000306549 MCUQ8NE86 351 aa8.92□□□□□ -0.98
PCDHB1-201ENST00000306549 RCOR1Q9UKL0 485 aa8.92□□□□□ -0.98
PCDHB1-201ENST00000306549 NEMP1O14524 444 aa8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 TAP1Q03518 808 aa8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 HSP90AA5PQ58FG0 334 aa8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 RAB42Q8N4Z0 105 aa8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 DCLK2Q8N568 766 aa8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 XXYLT1Q8NBI6 393 aa8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 NKX2-3Q8TAU0 364 aa8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 P2RX5Q93086 422 aa8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 FAM149B1Q96BN6 582 aa8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 XAB2Q9HCS7 855 aaKnown RBP8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 IL18RAPO95256 599 aa8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 ICAM1P05362 532 aa8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 DUOXA2Q1HG44 320 aa8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 QRICH1Q2TAL8 776 aa8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 TRAIPQ9BWF2 469 aa8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 THAP9Q9H5L6 903 aa8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 HPCAL4Q9UM19 191 aa8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 COL3A1P02461 1466 aaPredicted RBP8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 SYF2O95926 243 aaKnown RBP8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 CAP2P40123 477 aa8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 ARPP19P56211 112 aa8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 RRAGAQ7L523 313 aa8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 GIPC2Q8TF65 315 aa8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 TNIP3Q96KP6 325 aa8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 PCDHB8Q9UN66 801 aa8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 POLRMTO00411 1230 aaKnown RBP8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 DNAAF3Q8N9W5 541 aa8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 ACRBPQ8NEB7 543 aa8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 TSC1Q92574 1164 aa8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 GDAP1L1Q96MZ0 367 aa8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 MRPL46Q9H2W6 279 aaKnown RBP8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 RNF14Q9UBS8 474 aa8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 TLK1Q9UKI8 766 aa8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 PASKQ96RG2 1323 aa8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 STAT5BP51692 787 aa8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 EPHA7Q15375 998 aa8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 SEPT1Q8WYJ6 367 aa8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 RAVER2Q9HCJ3 691 aaKnown RBP8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 STK39Q9UEW8 545 aa8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 MCF2LO15068 1137 aa8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 PAMP19021 973 aa8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 Q3C1V9 767 aa8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 ZNF568Q3ZCX4 644 aa8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 HP1BP3Q5SSJ5 553 aaPredicted RBP8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 CCDC127Q96BQ5 260 aa8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 SRPK1Q96SB4 655 aaKnown RBP8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 POLIQ9UNA4 740 aa8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 ZNF148Q9UQR1 794 aa8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 CABYRO75952 493 aa8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 CALB1P05937 261 aa8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 MX2P20592 715 aa8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 PAX3P23760 479 aa8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 KIF23Q02241 960 aaPredicted RBP8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 C16orf72Q14CZ0 275 aa8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 PLEKHH3Q7Z736 793 aa8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 YAF2Q8IY57 180 aa8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 CXorf38Q8TB03 319 aa8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 GPRASP2Q96D09 838 aa8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 NRBF2Q96F24 287 aa8.91□□□□□ -0.98
PCDHB1-201ENST00000306549 PRKCQQ04759 706 aa8.9□□□□□ -0.98
PCDHB1-201ENST00000306549 PDXDC1Q6P996 788 aa8.9□□□□□ -0.98
PCDHB1-201ENST00000306549 USP28Q96RU2 1077 aa8.9□□□□□ -0.98
PCDHB1-201ENST00000306549 ANKEF1Q9NU02 776 aa8.9□□□□□ -0.98
PCDHB1-201ENST00000306549 NDUFB10O96000 172 aa8.9□□□□□ -0.98
PCDHB1-201ENST00000306549 RFX6Q8HWS3 928 aa8.9□□□□□ -0.98
PCDHB1-201ENST00000306549 CD302Q8IX05 232 aa8.9□□□□□ -0.98
PCDHB1-201ENST00000306549 SEZ6LQ9BYH1 1024 aa8.9□□□□□ -0.98
PCDHB1-201ENST00000306549 PRMT7Q9NVM4 692 aaPredicted RBP8.9□□□□□ -0.98
PCDHB1-201ENST00000306549 CPP00450 1065 aa8.9□□□□□ -0.98
PCDHB1-201ENST00000306549 KRT17Q04695 432 aa8.9□□□□□ -0.98
PCDHB1-201ENST00000306549 GLB1LQ6UWU2 654 aa8.9□□□□□ -0.98
PCDHB1-201ENST00000306549 EMILIN3Q9NT22 766 aa8.9□□□□□ -0.98
PCDHB1-201ENST00000306549 MYPNQ86TC9 1320 aa8.9□□□□□ -0.98
PCDHB1-201ENST00000306549 OPHN1O60890 802 aa8.9□□□□□ -0.98
PCDHB1-201ENST00000306549 APOEP02649 317 aa8.9□□□□□ -0.98
PCDHB1-201ENST00000306549 PLCG1P19174 1290 aa8.9□□□□□ -0.98
PCDHB1-201ENST00000306549 CACNB3P54284 484 aa8.9□□□□□ -0.98
PCDHB1-201ENST00000306549 LRRC31Q6UY01 552 aa8.9□□□□□ -0.98
PCDHB1-201ENST00000306549 SNX19Q92543 992 aa8.9□□□□□ -0.98
PCDHB1-201ENST00000306549 LRRC37BQ96QE4 947 aa8.9□□□□□ -0.98
PCDHB1-201ENST00000306549 NR1H4Q96RI1 486 aaPredicted RBP8.9□□□□□ -0.98
PCDHB1-201ENST00000306549 ZBTB18Q99592 522 aa8.9□□□□□ -0.98
PCDHB1-201ENST00000306549 TUBGCP2Q9BSJ2 902 aa8.9□□□□□ -0.98
PCDHB1-201ENST00000306549 SFMBT1Q9UHJ3 866 aa8.9□□□□□ -0.98
PCDHB1-201ENST00000306549 SERTAD1Q9UHV2 236 aa8.9□□□□□ -0.98
PCDHB1-201ENST00000306549 KRIT1O00522 736 aa8.9□□□□□ -0.99
PCDHB1-201ENST00000306549 SERPINB6P35237 376 aa8.9□□□□□ -0.99
PCDHB1-201ENST00000306549 NFX1Q12986 1120 aaKnown RBP8.9□□□□□ -0.99
PCDHB1-201ENST00000306549 GJA10Q969M2 543 aa8.9□□□□□ -0.99
PCDHB1-201ENST00000306549 SCHIP1Q9P0W5 487 aaPredicted RBP8.9□□□□□ -0.99
PCDHB1-201ENST00000306549 PCDHA7Q9UN72 937 aa8.9□□□□□ -0.99
PCDHB1-201ENST00000306549 PITPNM2Q9BZ72 1349 aa8.9□□□□□ -0.99
PCDHB1-201ENST00000306549 SLC4A1P02730 911 aa8.9□□□□□ -0.99
PCDHB1-201ENST00000306549 YWHAGP61981 247 aaKnown RBP eCLIP8.9□□□□□ -0.99
PCDHB1-201ENST00000306549 AMPD2Q01433 879 aa8.9□□□□□ -0.99
PCDHB1-201ENST00000306549 GLE1Q53GS7 698 aaKnown RBP8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms