RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 TAF2Q6P1X5 1199 aa9.98□□□□□ -0.81
PTPRE-202ENST00000306042 DNAJC24Q6P3W2 148 aa9.98□□□□□ -0.81
PTPRE-202ENST00000306042 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.98□□□□□ -0.81
PTPRE-202ENST00000306042 SH3TC2Q8TF17 1288 aa9.98□□□□□ -0.81
PTPRE-202ENST00000306042 MAIP1Q8WWC4 291 aa9.98□□□□□ -0.81
PTPRE-202ENST00000306042 KCNB2Q92953 911 aa9.98□□□□□ -0.81
PTPRE-202ENST00000306042 TRIM9Q9C026 710 aa9.98□□□□□ -0.81
PTPRE-202ENST00000306042 IQCGQ9H095 443 aaKnown RBP9.98□□□□□ -0.81
PTPRE-202ENST00000306042 MTRF1LQ9UGC7 380 aaKnown RBP9.98□□□□□ -0.81
PTPRE-202ENST00000306042 SLC8A2Q9UPR5 921 aa9.98□□□□□ -0.81
PTPRE-202ENST00000306042 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.98□□□□□ -0.81
PTPRE-202ENST00000306042 PGK1P00558 417 aa9.98□□□□□ -0.81
PTPRE-202ENST00000306042 TBXAS1P24557 533 aaPredicted RBP9.98□□□□□ -0.81
PTPRE-202ENST00000306042 SHC4Q6S5L8 630 aa9.98□□□□□ -0.81
PTPRE-202ENST00000306042 SAMSN1Q9NSI8 373 aaKnown RBP9.98□□□□□ -0.81
PTPRE-202ENST00000306042 A0A1W2PRG0 241 aa9.98□□□□□ -0.81
PTPRE-202ENST00000306042 NPTXRO95502 500 aa9.98□□□□□ -0.81
PTPRE-202ENST00000306042 INSRRP14616 1297 aa9.98□□□□□ -0.81
PTPRE-202ENST00000306042 ACOT2P49753 483 aa9.98□□□□□ -0.81
PTPRE-202ENST00000306042 PSEN2P49810 448 aa9.98□□□□□ -0.81
PTPRE-202ENST00000306042 NOLC1Q14978 699 aaKnown RBP eCLIP9.98□□□□□ -0.81
PTPRE-202ENST00000306042 GRIK4Q16099 956 aa9.98□□□□□ -0.81
PTPRE-202ENST00000306042 CCDC144BQ3MJ40 725 aa9.98□□□□□ -0.81
PTPRE-202ENST00000306042 ATP8B4Q8TF62 1192 aa9.98□□□□□ -0.81
PTPRE-202ENST00000306042 ZNF653Q96CK0 615 aa9.98□□□□□ -0.81
PTPRE-202ENST00000306042 MSRAQ9UJ68 235 aa9.98□□□□□ -0.81
PTPRE-202ENST00000306042 AGAP1Q9UPQ3 857 aa9.98□□□□□ -0.81
PTPRE-202ENST00000306042 DOT1LQ8TEK3 1739 aa9.98□□□□□ -0.81
PTPRE-202ENST00000306042 CD4P01730 458 aa9.98□□□□□ -0.81
PTPRE-202ENST00000306042 ELNP15502 786 aa9.98□□□□□ -0.81
PTPRE-202ENST00000306042 PRCPP42785 496 aa9.98□□□□□ -0.81
PTPRE-202ENST00000306042 RBP5P82980 135 aa9.98□□□□□ -0.81
PTPRE-202ENST00000306042 CCDC25Q86WR0 208 aa9.98□□□□□ -0.81
PTPRE-202ENST00000306042 SREK1Q8WXA9 508 aaKnown RBP9.98□□□□□ -0.81
PTPRE-202ENST00000306042 TNIP3Q96KP6 325 aa9.98□□□□□ -0.81
PTPRE-202ENST00000306042 C17orf75Q9HAS0 396 aa9.98□□□□□ -0.81
PTPRE-202ENST00000306042 PRG3Q9Y2Y8 225 aaPredicted RBP9.98□□□□□ -0.81
PTPRE-202ENST00000306042 VTNP04004 478 aa9.97□□□□□ -0.81
PTPRE-202ENST00000306042 SCP2P22307 547 aa9.97□□□□□ -0.81
PTPRE-202ENST00000306042 SEMA3FQ13275 785 aa9.97□□□□□ -0.81
PTPRE-202ENST00000306042 PTGISQ16647 500 aa9.97□□□□□ -0.81
PTPRE-202ENST00000306042 Q4G0T1 1027 aa9.97□□□□□ -0.81
PTPRE-202ENST00000306042 TMEM270Q6UE05 265 aa9.97□□□□□ -0.81
PTPRE-202ENST00000306042 CXCL17Q6UXB2 119 aa9.97□□□□□ -0.81
PTPRE-202ENST00000306042 RPUSD2Q8IZ73 545 aaKnown RBP9.97□□□□□ -0.81
PTPRE-202ENST00000306042 PRPF31Q8WWY3 499 aaKnown RBP9.97□□□□□ -0.81
PTPRE-202ENST00000306042 HAUS1Q96CS2 278 aa9.97□□□□□ -0.81
PTPRE-202ENST00000306042 SETD1AO15047 1707 aaKnown RBP9.97□□□□□ -0.81
PTPRE-202ENST00000306042 GNRH1P01148 92 aa9.97□□□□□ -0.81
PTPRE-202ENST00000306042 CLUL1Q15846 466 aa9.97□□□□□ -0.81
PTPRE-202ENST00000306042 NFRKBQ6P4R8 1299 aa9.97□□□□□ -0.81
PTPRE-202ENST00000306042 ERICH1Q86X53 443 aa9.97□□□□□ -0.81
PTPRE-202ENST00000306042 CCDC89Q8N998 374 aa9.97□□□□□ -0.81
PTPRE-202ENST00000306042 PPP1R14CQ8TAE6 165 aa9.97□□□□□ -0.81
PTPRE-202ENST00000306042 MRPL47Q9HD33 250 aaKnown RBP9.97□□□□□ -0.81
PTPRE-202ENST00000306042 AFG3L2Q9Y4W6 797 aa9.97□□□□□ -0.81
PTPRE-202ENST00000306042 GOLGA6CA6NDK9 693 aa9.97□□□□□ -0.81
PTPRE-202ENST00000306042 GOLGA6BA6NDN3 693 aa9.97□□□□□ -0.81
PTPRE-202ENST00000306042 PDXKO00764 312 aa9.97□□□□□ -0.81
PTPRE-202ENST00000306042 GOLGA6DP0CG33 693 aa9.97□□□□□ -0.81
PTPRE-202ENST00000306042 WDR72Q3MJ13 1102 aa9.97□□□□□ -0.81
PTPRE-202ENST00000306042 PPP1R21Q6ZMI0 780 aa9.97□□□□□ -0.81
PTPRE-202ENST00000306042 YAF2Q8IY57 180 aa9.97□□□□□ -0.81
PTPRE-202ENST00000306042 RYBPQ8N488 228 aaPredicted RBP9.97□□□□□ -0.81
PTPRE-202ENST00000306042 FAM133AQ8N9E0 248 aa9.97□□□□□ -0.81
PTPRE-202ENST00000306042 SLAIN1Q8ND83 568 aa9.97□□□□□ -0.81
PTPRE-202ENST00000306042 GOLGA6AQ9NYA3 693 aa9.97□□□□□ -0.81
PTPRE-202ENST00000306042 TRIM49BA6NDI0 452 aa9.97□□□□□ -0.81
PTPRE-202ENST00000306042 SMIM22K7EJ46 135 aa9.97□□□□□ -0.81
PTPRE-202ENST00000306042 PRRG1O14668 218 aa9.97□□□□□ -0.81
PTPRE-202ENST00000306042 DCAF4L1Q3SXM0 396 aa9.97□□□□□ -0.81
PTPRE-202ENST00000306042 PAN2Q504Q3 1202 aaKnown RBP9.97□□□□□ -0.81
PTPRE-202ENST00000306042 C11orf57Q6ZUT1 292 aaPredicted RBP9.97□□□□□ -0.81
PTPRE-202ENST00000306042 FMR1NBQ8N0W7 255 aaPredicted RBP9.97□□□□□ -0.81
PTPRE-202ENST00000306042 KIF2CQ99661 725 aa9.97□□□□□ -0.81
PTPRE-202ENST00000306042 NAPGQ99747 312 aaPredicted RBP9.97□□□□□ -0.81
PTPRE-202ENST00000306042 HSPBP1Q9NZL4 362 aa9.97□□□□□ -0.81
PTPRE-202ENST00000306042 MAGED2Q9UNF1 606 aaPredicted RBP9.97□□□□□ -0.81
PTPRE-202ENST00000306042 SNX9Q9Y5X1 595 aa9.97□□□□□ -0.81
PTPRE-202ENST00000306042 SNCAIPQ9Y6H5 919 aa9.97□□□□□ -0.81
PTPRE-202ENST00000306042 PPP2R5DQ14738 602 aa9.96□□□□□ -0.81
PTPRE-202ENST00000306042 ARL13BQ3SXY8 428 aa9.96□□□□□ -0.81
PTPRE-202ENST00000306042 LMBRD2Q68DH5 695 aaPredicted RBP9.96□□□□□ -0.81
PTPRE-202ENST00000306042 SYT10Q6XYQ8 523 aa9.96□□□□□ -0.81
PTPRE-202ENST00000306042 NIPA1Q7RTP0 329 aa9.96□□□□□ -0.81
PTPRE-202ENST00000306042 APPL2Q8NEU8 664 aa9.96□□□□□ -0.81
PTPRE-202ENST00000306042 REPS2Q8NFH8 660 aa9.96□□□□□ -0.81
PTPRE-202ENST00000306042 TARS2Q9BW92 718 aaKnown RBP9.96□□□□□ -0.81
PTPRE-202ENST00000306042 COLEC11Q9BWP8 271 aa9.96□□□□□ -0.81
PTPRE-202ENST00000306042 MUTP22033 750 aa9.96□□□□□ -0.81
PTPRE-202ENST00000306042 CASP14P31944 242 aa9.96□□□□□ -0.81
PTPRE-202ENST00000306042 KCNH2Q12809 1159 aa9.96□□□□□ -0.81
PTPRE-202ENST00000306042 HS1BP3Q53T59 392 aa9.96□□□□□ -0.81
PTPRE-202ENST00000306042 TCP11X2Q5H9J9 407 aa9.96□□□□□ -0.81
PTPRE-202ENST00000306042 DLK2Q6UY11 383 aa9.96□□□□□ -0.81
PTPRE-202ENST00000306042 SPATA2LQ8IUW3 424 aaPredicted RBP9.96□□□□□ -0.81
PTPRE-202ENST00000306042 GSDMBQ8TAX9 411 aa9.96□□□□□ -0.81
PTPRE-202ENST00000306042 RGPD5Q99666 1765 aa9.96□□□□□ -0.81
PTPRE-202ENST00000306042 AOC2O75106 756 aa9.96□□□□□ -0.82
PTPRE-202ENST00000306042 IL18RAPO95256 599 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms