RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 USP17L20D6RJB6 530 aa13.99□□□□□ -0.17
TRIM35-201ENST00000305364 DCTN3O75935 186 aa13.99□□□□□ -0.17
TRIM35-201ENST00000305364 USP17L24Q0WX57 530 aa13.99□□□□□ -0.17
TRIM35-201ENST00000305364 SBK1Q52WX2 424 aa13.99□□□□□ -0.17
TRIM35-201ENST00000305364 USP17L6PQ6QN14 398 aa13.99□□□□□ -0.17
TRIM35-201ENST00000305364 CEP120Q8N960 986 aa13.99□□□□□ -0.17
TRIM35-201ENST00000305364 LRRC15Q8TF66 581 aa13.99□□□□□ -0.17
TRIM35-201ENST00000305364 FAXDC2Q96IV6 333 aa13.99□□□□□ -0.17
TRIM35-201ENST00000305364 THAP2Q9H0W7 228 aa13.99□□□□□ -0.17
TRIM35-201ENST00000305364 BSDC1Q9NW68 430 aaPredicted RBP13.99□□□□□ -0.17
TRIM35-201ENST00000305364 HAO1Q9UJM8 370 aa13.99□□□□□ -0.17
TRIM35-201ENST00000305364 RABGAP1Q9Y3P9 1069 aa13.99□□□□□ -0.17
TRIM35-201ENST00000305364 MYH13Q9UKX3 1938 aa13.99□□□□□ -0.17
TRIM35-201ENST00000305364 PAEPP09466 180 aa13.99□□□□□ -0.17
TRIM35-201ENST00000305364 MRPS35P82673 323 aaKnown RBP13.99□□□□□ -0.17
TRIM35-201ENST00000305364 ORC2Q13416 577 aaPredicted RBP13.99□□□□□ -0.17
TRIM35-201ENST00000305364 EDRF1Q3B7T1 1238 aa13.99□□□□□ -0.17
TRIM35-201ENST00000305364 DPP8Q6V1X1 898 aaPredicted RBP13.99□□□□□ -0.17
TRIM35-201ENST00000305364 KCTD1Q719H9 257 aa13.99□□□□□ -0.17
TRIM35-201ENST00000305364 RPUSD2Q8IZ73 545 aaKnown RBP13.99□□□□□ -0.17
TRIM35-201ENST00000305364 PDCD7Q8N8D1 485 aaKnown RBP13.99□□□□□ -0.17
TRIM35-201ENST00000305364 DNAJC9Q8WXX5 260 aa13.99□□□□□ -0.17
TRIM35-201ENST00000305364 DCTN4Q9UJW0 460 aa13.99□□□□□ -0.17
TRIM35-201ENST00000305364 H0YGN5 161 aa13.98□□□□□ -0.17
TRIM35-201ENST00000305364 MMP13P45452 471 aa13.98□□□□□ -0.17
TRIM35-201ENST00000305364 CCDC174Q6PII3 467 aa13.98□□□□□ -0.17
TRIM35-201ENST00000305364 PHLDB2Q86SQ0 1253 aa13.98□□□□□ -0.17
TRIM35-201ENST00000305364 SLFN12Q8IYM2 578 aa13.98□□□□□ -0.17
TRIM35-201ENST00000305364 TEX9Q8N6V9 391 aa13.98□□□□□ -0.17
TRIM35-201ENST00000305364 GRK7Q8WTQ7 553 aa13.98□□□□□ -0.17
TRIM35-201ENST00000305364 DHX36Q9H2U1 1008 aaKnown RBP13.98□□□□□ -0.17
TRIM35-201ENST00000305364 PCDHA1Q9Y5I3 950 aa13.98□□□□□ -0.17
TRIM35-201ENST00000305364 NFS1Q9Y697 457 aa13.98□□□□□ -0.17
TRIM35-201ENST00000305364 PALM3A6NDB9 673 aaPredicted RBP13.98□□□□□ -0.17
TRIM35-201ENST00000305364 DDX3XO00571 662 aaKnown RBP eCLIP13.98□□□□□ -0.173e-12■■■■■ 30.5
TRIM35-201ENST00000305364 TMEM253P0C7T8 217 aa13.98□□□□□ -0.17
TRIM35-201ENST00000305364 RPL21P46778 160 aaKnown RBP13.98□□□□□ -0.17
TRIM35-201ENST00000305364 ERFP50548 548 aa13.98□□□□□ -0.17
TRIM35-201ENST00000305364 PAPOLAP51003 745 aaKnown RBP13.98□□□□□ -0.17
TRIM35-201ENST00000305364 RIPK1Q13546 671 aa13.98□□□□□ -0.17
TRIM35-201ENST00000305364 RCN2Q14257 317 aa13.98□□□□□ -0.17
TRIM35-201ENST00000305364 HP1BP3Q5SSJ5 553 aaPredicted RBP13.98□□□□□ -0.17
TRIM35-201ENST00000305364 AADACL2Q6P093 401 aa13.98□□□□□ -0.17
TRIM35-201ENST00000305364 RXFP1Q9HBX9 757 aa13.98□□□□□ -0.17
TRIM35-201ENST00000305364 PITPNM2Q9BZ72 1349 aa13.98□□□□□ -0.17
TRIM35-201ENST00000305364 UBR1Q8IWV7 1749 aa13.98□□□□□ -0.17
TRIM35-201ENST00000305364 GNPATO15228 680 aa13.98□□□□□ -0.17
TRIM35-201ENST00000305364 CASP4P49662 377 aa13.98□□□□□ -0.17
TRIM35-201ENST00000305364 KRT17Q04695 432 aa13.98□□□□□ -0.17
TRIM35-201ENST00000305364 MKRN3Q13064 507 aaKnown RBP13.98□□□□□ -0.17
TRIM35-201ENST00000305364 DNAJC3Q13217 504 aa13.98□□□□□ -0.17
TRIM35-201ENST00000305364 CNGA2Q16280 664 aa13.98□□□□□ -0.17
TRIM35-201ENST00000305364 EMC10Q5UCC4 262 aa13.98□□□□□ -0.17
TRIM35-201ENST00000305364 APBB1IPQ7Z5R6 666 aaPredicted RBP13.98□□□□□ -0.17
TRIM35-201ENST00000305364 C9orf72Q96LT7 481 aa13.98□□□□□ -0.17
TRIM35-201ENST00000305364 AGAP1Q9UPQ3 857 aa13.98□□□□□ -0.17
TRIM35-201ENST00000305364 NR2E1Q9Y466 385 aa13.98□□□□□ -0.17
TRIM35-201ENST00000305364 IFNB1P01574 187 aa13.98□□□□□ -0.17
TRIM35-201ENST00000305364 MYBP10242 640 aa13.98□□□□□ -0.17
TRIM35-201ENST00000305364 RARGP13631 454 aa13.98□□□□□ -0.17
TRIM35-201ENST00000305364 GPC5P78333 572 aa13.98□□□□□ -0.17
TRIM35-201ENST00000305364 SPARCL1Q14515 664 aa13.98□□□□□ -0.17
TRIM35-201ENST00000305364 DTX3LQ8TDB6 740 aa13.98□□□□□ -0.17
TRIM35-201ENST00000305364 PIGOQ8TEQ8 1089 aa13.98□□□□□ -0.17
TRIM35-201ENST00000305364 RNF25Q96BH1 459 aaPredicted RBP13.98□□□□□ -0.17
TRIM35-201ENST00000305364 TMEM237Q96Q45 408 aa13.98□□□□□ -0.17
TRIM35-201ENST00000305364 MYH6P13533 1939 aa13.97□□□□□ -0.17
TRIM35-201ENST00000305364 RIPK2O43353 540 aa13.97□□□□□ -0.17
TRIM35-201ENST00000305364 CIB2O75838 187 aa13.97□□□□□ -0.17
TRIM35-201ENST00000305364 LRRC23Q53EV4 343 aaPredicted RBP13.97□□□□□ -0.17
TRIM35-201ENST00000305364 PHLDB3Q6NSJ2 640 aa13.97□□□□□ -0.17
TRIM35-201ENST00000305364 AGGF1Q8N302 714 aaeCLIP13.97□□□□□ -0.17
TRIM35-201ENST00000305364 MXD3Q9BW11 206 aa13.97□□□□□ -0.17
TRIM35-201ENST00000305364 ROPN1BQ9BZX4 212 aaPredicted RBP13.97□□□□□ -0.17
TRIM35-201ENST00000305364 ROPN1Q9HAT0 212 aaPredicted RBP13.97□□□□□ -0.17
TRIM35-201ENST00000305364 ZFP69BQ9UJL9 534 aa13.97□□□□□ -0.17
TRIM35-201ENST00000305364 SERPINA10Q9UK55 444 aa13.97□□□□□ -0.17
TRIM35-201ENST00000305364 FAM98CQ17RN3 349 aaKnown RBP13.97□□□□□ -0.17
TRIM35-201ENST00000305364 ASPRV1Q53RT3 343 aa13.97□□□□□ -0.17
TRIM35-201ENST00000305364 SEPT14Q6ZU15 432 aa13.97□□□□□ -0.17
TRIM35-201ENST00000305364 TRMT10CQ7L0Y3 403 aaKnown RBP13.97□□□□□ -0.17
TRIM35-201ENST00000305364 CFAP61Q8NHU2 1237 aa13.97□□□□□ -0.17
TRIM35-201ENST00000305364 GRAMD1AQ96CP6 724 aa13.97□□□□□ -0.17
TRIM35-201ENST00000305364 CDC42EP4Q9H3Q1 356 aaKnown RBP13.97□□□□□ -0.17
TRIM35-201ENST00000305364 PCIF1Q9H4Z3 704 aa13.97□□□□□ -0.17
TRIM35-201ENST00000305364 A0A0G2JND7 137 aa13.97□□□□□ -0.17
TRIM35-201ENST00000305364 KLRK1P26718 216 aa13.97□□□□□ -0.17
TRIM35-201ENST00000305364 RANBP1P43487 201 aa13.97□□□□□ -0.17
TRIM35-201ENST00000305364 CDR2Q01850 454 aa13.97□□□□□ -0.17
TRIM35-201ENST00000305364 ODR4Q5SWX8 454 aa13.97□□□□□ -0.17
TRIM35-201ENST00000305364 BTNL9Q6UXG8 535 aa13.97□□□□□ -0.17
TRIM35-201ENST00000305364 IRF2BP2Q7Z5L9 587 aa13.97□□□□□ -0.17
TRIM35-201ENST00000305364 ARHGAP24Q8N264 748 aa13.97□□□□□ -0.17
TRIM35-201ENST00000305364 MAIP1Q8WWC4 291 aa13.97□□□□□ -0.17
TRIM35-201ENST00000305364 HEMGNQ9BXL5 484 aa13.97□□□□□ -0.17
TRIM35-201ENST00000305364 GANQ9H2C0 597 aa13.97□□□□□ -0.17
TRIM35-201ENST00000305364 AFF2P51816 1311 aa13.96□□□□□ -0.17
TRIM35-201ENST00000305364 COMTP21964 271 aa13.96□□□□□ -0.17
TRIM35-201ENST00000305364 RFX8Q6ZV50 586 aa13.96□□□□□ -0.17
TRIM35-201ENST00000305364 TLCD1Q96CP7 247 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms