RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 XPNPEP1Q9NQW7 623 aa21.15■□□□□ 0.98
HOXC4-201ENST00000303406 APEX2Q9UBZ4 518 aa21.15■□□□□ 0.98
HOXC4-201ENST00000303406 TSKSQ9UJT2 592 aa21.15■□□□□ 0.98
HOXC4-201ENST00000303406 A0A087X0T9 212 aa21.14■□□□□ 0.98
HOXC4-201ENST00000303406 CCDC169A6NNP5 214 aa21.14■□□□□ 0.98
HOXC4-201ENST00000303406 OATP04181 439 aa21.14■□□□□ 0.98
HOXC4-201ENST00000303406 FAM228BP0C875 321 aa21.14■□□□□ 0.98
HOXC4-201ENST00000303406 SOX5P35711 763 aa21.14■□□□□ 0.98
HOXC4-201ENST00000303406 PTK2Q05397 1052 aa21.14■□□□□ 0.98
HOXC4-201ENST00000303406 NAB2Q15742 525 aa21.14■□□□□ 0.98
HOXC4-201ENST00000303406 ZNF571Q7Z3V5 609 aaPredicted RBP21.14■□□□□ 0.98
HOXC4-201ENST00000303406 IFT74Q96LB3 600 aa21.14■□□□□ 0.98
HOXC4-201ENST00000303406 FBXL18Q96ME1 805 aa21.14■□□□□ 0.98
HOXC4-201ENST00000303406 SH2D3AQ9BRG2 576 aa21.14■□□□□ 0.98
HOXC4-201ENST00000303406 INTUQ9ULD6 942 aa21.14■□□□□ 0.98
HOXC4-201ENST00000303406 MYH9P35579 1960 aaKnown RBP21.14■□□□□ 0.97
HOXC4-201ENST00000303406 DENND3A2RUS2 1198 aa21.14■□□□□ 0.97
HOXC4-201ENST00000303406 TRIM49P0CI25 452 aa21.14■□□□□ 0.97
HOXC4-201ENST00000303406 TRIM49CP0CI26 452 aa21.14■□□□□ 0.97
HOXC4-201ENST00000303406 GARTP22102 1010 aa21.14■□□□□ 0.97
HOXC4-201ENST00000303406 UBA1P22314 1058 aaKnown RBP21.14■□□□□ 0.97
HOXC4-201ENST00000303406 BMS1Q14692 1282 aaKnown RBP21.14■□□□□ 0.97
HOXC4-201ENST00000303406 LDLRAD1Q5T700 205 aa21.14■□□□□ 0.97
HOXC4-201ENST00000303406 CYFIP1Q7L576 1253 aa21.14■□□□□ 0.97
HOXC4-201ENST00000303406 LMO3Q8TAP4 145 aa21.14■□□□□ 0.97
HOXC4-201ENST00000303406 AFAP1L1Q8TED9 768 aa21.14■□□□□ 0.97
HOXC4-201ENST00000303406 BSNDQ8WZ55 320 aa21.14■□□□□ 0.97
HOXC4-201ENST00000303406 MLXIPQ9HAP2 919 aa21.14■□□□□ 0.97
HOXC4-201ENST00000303406 ARHGAP28Q9P2N2 729 aa21.14■□□□□ 0.97
HOXC4-201ENST00000303406 PUF60Q9UHX1 559 aaKnown RBP21.14■□□□□ 0.97
HOXC4-201ENST00000303406 DNAJC12Q9UKB3 198 aa21.14■□□□□ 0.97
HOXC4-201ENST00000303406 AJAP1Q9UKB5 411 aaPredicted RBP21.14■□□□□ 0.97
HOXC4-201ENST00000303406 SNX12Q9UMY4 172 aa21.14■□□□□ 0.97
HOXC4-201ENST00000303406 CAPN6Q9Y6Q1 641 aa21.14■□□□□ 0.97
HOXC4-201ENST00000303406 IQCA1LA6NCM1 817 aa21.13■□□□□ 0.97
HOXC4-201ENST00000303406 GLTPD2A6NH11 291 aa21.13■□□□□ 0.97
HOXC4-201ENST00000303406 F8VZ95 297 aa21.13■□□□□ 0.97
HOXC4-201ENST00000303406 FARP2O94887 1054 aaPredicted RBP21.13■□□□□ 0.97
HOXC4-201ENST00000303406 MOCS3O95396 460 aa21.13■□□□□ 0.97
HOXC4-201ENST00000303406 CLCN6P51797 869 aa21.13■□□□□ 0.97
HOXC4-201ENST00000303406 TTLL12Q14166 644 aaPredicted RBP21.13■□□□□ 0.97
HOXC4-201ENST00000303406 EPC2Q52LR7 807 aa21.13■□□□□ 0.97
HOXC4-201ENST00000303406 BRDTQ58F21 947 aaPredicted RBP21.13■□□□□ 0.97
HOXC4-201ENST00000303406 SHCBP1Q8NEM2 672 aa21.13■□□□□ 0.97
HOXC4-201ENST00000303406 TMC2Q8TDI7 906 aa21.13■□□□□ 0.97
HOXC4-201ENST00000303406 OPTNQ96CV9 577 aa21.13■□□□□ 0.97
HOXC4-201ENST00000303406 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.13■□□□□ 0.97
HOXC4-201ENST00000303406 PCIF1Q9H4Z3 704 aa21.13■□□□□ 0.97
HOXC4-201ENST00000303406 ADAMTS1Q9UHI8 967 aa21.13■□□□□ 0.97
HOXC4-201ENST00000303406 EMSYQ7Z589 1322 aa21.13■□□□□ 0.97
HOXC4-201ENST00000303406 ENC1O14682 589 aa21.12■□□□□ 0.97
HOXC4-201ENST00000303406 KIAA0391O15091 583 aaKnown RBP21.12■□□□□ 0.97
HOXC4-201ENST00000303406 ATP8B1O43520 1251 aa21.12■□□□□ 0.97
HOXC4-201ENST00000303406 TCP1P17987 556 aaKnown RBP21.12■□□□□ 0.97
HOXC4-201ENST00000303406 ATP4AP20648 1035 aa21.12■□□□□ 0.97
HOXC4-201ENST00000303406 CNGA1P29973 690 aa21.12■□□□□ 0.97
HOXC4-201ENST00000303406 GTF2H1P32780 548 aa21.12■□□□□ 0.97
HOXC4-201ENST00000303406 RFC5P40937 340 aa21.12■□□□□ 0.97
HOXC4-201ENST00000303406 ARID5AQ03989 594 aa21.12■□□□□ 0.97
HOXC4-201ENST00000303406 EMC2Q15006 297 aa21.12■□□□□ 0.97
HOXC4-201ENST00000303406 BRD3Q15059 726 aa21.12■□□□□ 0.97
HOXC4-201ENST00000303406 C1orf220Q5T0J3 134 aa21.12■□□□□ 0.97
HOXC4-201ENST00000303406 FAM160B1Q5W0V3 765 aa21.12■□□□□ 0.97
HOXC4-201ENST00000303406 SEPT14Q6ZU15 432 aa21.12■□□□□ 0.97
HOXC4-201ENST00000303406 ZNF572Q7Z3I7 529 aaPredicted RBP21.12■□□□□ 0.97
HOXC4-201ENST00000303406 USP37Q86T82 979 aa21.12■□□□□ 0.97
HOXC4-201ENST00000303406 PAGR1Q9BTK6 254 aa21.12■□□□□ 0.97
HOXC4-201ENST00000303406 POLR3FQ9H1D9 316 aaPredicted RBP21.12■□□□□ 0.97
HOXC4-201ENST00000303406 MROH8Q9H579 483 aa21.12■□□□□ 0.97
HOXC4-201ENST00000303406 DHX33Q9H6R0 707 aaKnown RBP21.12■□□□□ 0.97
HOXC4-201ENST00000303406 RBPJLQ9UBG7 517 aa21.12■□□□□ 0.97
HOXC4-201ENST00000303406 DDX41Q9UJV9 622 aaKnown RBP21.12■□□□□ 0.97
HOXC4-201ENST00000303406 SIP14410 1827 aa21.12■□□□□ 0.97
HOXC4-201ENST00000303406 DNAJC25-GNG10A0A024R161 153 aa21.11■□□□□ 0.97
HOXC4-201ENST00000303406 GSTTP1A0A1W2PQM5 241 aa21.11■□□□□ 0.97
HOXC4-201ENST00000303406 TISP43B9A030 160 aa21.11■□□□□ 0.97
HOXC4-201ENST00000303406 ADSSP30520 456 aa21.11■□□□□ 0.97
HOXC4-201ENST00000303406 ITIH3Q06033 890 aa21.11■□□□□ 0.97
HOXC4-201ENST00000303406 FSTL1Q12841 308 aa21.11■□□□□ 0.97
HOXC4-201ENST00000303406 IFI16Q16666 785 aaKnown RBP21.11■□□□□ 0.97
HOXC4-201ENST00000303406 GPAT2Q6NUI2 795 aa21.11■□□□□ 0.97
HOXC4-201ENST00000303406 METTL7BQ6UX53 244 aa21.11■□□□□ 0.97
HOXC4-201ENST00000303406 MORC4Q8TE76 937 aa21.11■□□□□ 0.97
HOXC4-201ENST00000303406 MFSD14AQ96MC6 490 aa21.11■□□□□ 0.97
HOXC4-201ENST00000303406 TAF1DQ9H5J8 278 aaPredicted RBP21.11■□□□□ 0.97
HOXC4-201ENST00000303406 HDAC6Q9UBN7 1215 aa21.11■□□□□ 0.97
HOXC4-201ENST00000303406 NAGPAQ9UK23 515 aa21.11■□□□□ 0.97
HOXC4-201ENST00000303406 RAB21Q9UL25 225 aa21.11■□□□□ 0.97
HOXC4-201ENST00000303406 HYOU1Q9Y4L1 999 aa21.11■□□□□ 0.97
HOXC4-201ENST00000303406 TELO2Q9Y4R8 837 aa21.11■□□□□ 0.97
HOXC4-201ENST00000303406 PCDHGC5Q9Y5F6 944 aa21.11■□□□□ 0.97
HOXC4-201ENST00000303406 ANKRD63C9JTQ0 380 aa21.1■□□□□ 0.97
HOXC4-201ENST00000303406 ZSCAN20P17040 1043 aaPredicted RBP21.1■□□□□ 0.97
HOXC4-201ENST00000303406 POLGP54098 1239 aaPredicted RBP21.1■□□□□ 0.97
HOXC4-201ENST00000303406 DRAP1Q14919 205 aaPredicted RBP21.1■□□□□ 0.97
HOXC4-201ENST00000303406 SNRNP35Q16560 246 aaKnown RBP21.1■□□□□ 0.97
HOXC4-201ENST00000303406 MTERF2Q49AM1 385 aa21.1■□□□□ 0.97
HOXC4-201ENST00000303406 TMCO3Q6UWJ1 677 aa21.1■□□□□ 0.97
HOXC4-201ENST00000303406 PNMA8AQ86V59 439 aaPredicted RBP21.1■□□□□ 0.97
HOXC4-201ENST00000303406 RDH13Q8NBN7 331 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms