RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 POLGP54098 1239 aaPredicted RBP14.29□□□□□ -0.12
CASC4-201ENST00000299957 GPC5P78333 572 aa14.29□□□□□ -0.12
CASC4-201ENST00000299957 BASP1P80723 227 aaKnown RBP14.29□□□□□ -0.12
CASC4-201ENST00000299957 LRRC8CQ8TDW0 803 aa14.29□□□□□ -0.12
CASC4-201ENST00000299957 ACCSQ96QU6 501 aa14.29□□□□□ -0.12
CASC4-201ENST00000299957 SMC6Q96SB8 1091 aa14.29□□□□□ -0.12
CASC4-201ENST00000299957 MMTAG2Q9BU76 263 aaKnown RBP14.29□□□□□ -0.12
CASC4-201ENST00000299957 RAB20Q9NX57 234 aa14.29□□□□□ -0.12
CASC4-201ENST00000299957 MAD1L1Q9Y6D9 718 aa14.29□□□□□ -0.12
CASC4-201ENST00000299957 TXNDC9O14530 226 aa14.29□□□□□ -0.12
CASC4-201ENST00000299957 USP11P51784 963 aa14.29□□□□□ -0.12
CASC4-201ENST00000299957 NEDD9Q14511 834 aa14.29□□□□□ -0.12
CASC4-201ENST00000299957 CC2D2BQ6DHV5 1058 aa14.29□□□□□ -0.12
CASC4-201ENST00000299957 TMEM270Q6UE05 265 aa14.29□□□□□ -0.12
CASC4-201ENST00000299957 TPCN2Q8NHX9 752 aa14.29□□□□□ -0.12
CASC4-201ENST00000299957 PIK3R2O00459 728 aa14.29□□□□□ -0.12
CASC4-201ENST00000299957 CHUKO15111 745 aa14.29□□□□□ -0.12
CASC4-201ENST00000299957 KIAA1755Q5JYT7 1200 aa14.29□□□□□ -0.12
CASC4-201ENST00000299957 PPP4R3CPQ6ZMV5 832 aa14.29□□□□□ -0.12
CASC4-201ENST00000299957 XXYLT1Q8NBI6 393 aa14.29□□□□□ -0.12
CASC4-201ENST00000299957 ACER1Q8TDN7 264 aa14.29□□□□□ -0.12
CASC4-201ENST00000299957 RTFDC1Q9BY42 306 aaPredicted RBP14.29□□□□□ -0.12
CASC4-201ENST00000299957 PITPNM3Q9BZ71 974 aa14.29□□□□□ -0.12
CASC4-201ENST00000299957 COA1Q9GZY4 146 aa14.29□□□□□ -0.12
CASC4-201ENST00000299957 DENND3A2RUS2 1198 aa14.28□□□□□ -0.12
CASC4-201ENST00000299957 CDC25CP30307 473 aa14.28□□□□□ -0.12
CASC4-201ENST00000299957 KCNMA1Q12791 1236 aa14.28□□□□□ -0.12
CASC4-201ENST00000299957 PPP2R5AQ15172 486 aa14.28□□□□□ -0.12
CASC4-201ENST00000299957 SEZ6Q53EL9 994 aa14.28□□□□□ -0.12
CASC4-201ENST00000299957 BRDTQ58F21 947 aaPredicted RBP14.28□□□□□ -0.12
CASC4-201ENST00000299957 FYB2Q5VWT5 728 aa14.28□□□□□ -0.12
CASC4-201ENST00000299957 JAMLQ86YT9 394 aa14.28□□□□□ -0.12
CASC4-201ENST00000299957 RGPD8O14715 1765 aaPredicted RBP14.28□□□□□ -0.12
CASC4-201ENST00000299957 A0A0G2JND7 137 aa14.28□□□□□ -0.12
CASC4-201ENST00000299957 MYBL1P10243 752 aa14.28□□□□□ -0.12
CASC4-201ENST00000299957 YY1P25490 414 aa14.28□□□□□ -0.12
CASC4-201ENST00000299957 SOX10P56693 466 aa14.28□□□□□ -0.12
CASC4-201ENST00000299957 PRAMEF18Q5VWM3 479 aa14.28□□□□□ -0.12
CASC4-201ENST00000299957 SEPT12Q8IYM1 358 aa14.28□□□□□ -0.12
CASC4-201ENST00000299957 C4orf33Q8N1A6 199 aa14.28□□□□□ -0.12
CASC4-201ENST00000299957 HIPK4Q8NE63 616 aa14.28□□□□□ -0.12
CASC4-201ENST00000299957 TNFRSF25Q93038 417 aa14.28□□□□□ -0.12
CASC4-201ENST00000299957 PCSK1NQ9UHG2 260 aa14.28□□□□□ -0.12
CASC4-201ENST00000299957 PPP1R9AQ9ULJ8 1098 aa14.28□□□□□ -0.12
CASC4-201ENST00000299957 G3BP2Q9UN86 482 aaKnown RBP14.28□□□□□ -0.12
CASC4-201ENST00000299957 SIK3Q9Y2K2 1263 aa14.28□□□□□ -0.12
CASC4-201ENST00000299957 RICTORQ6R327 1708 aa14.28□□□□□ -0.12
CASC4-201ENST00000299957 GPR75-ASB3A0A0A6YYF3 556 aa14.28□□□□□ -0.12
CASC4-201ENST00000299957 ZNF233A6NK53 670 aa14.28□□□□□ -0.12
CASC4-201ENST00000299957 PIAS1O75925 651 aa14.28□□□□□ -0.12
CASC4-201ENST00000299957 PDHA1P08559 390 aa14.28□□□□□ -0.12
CASC4-201ENST00000299957 SRGAP2CP0DJJ0 459 aa14.28□□□□□ -0.12
CASC4-201ENST00000299957 DESP17661 470 aa14.28□□□□□ -0.12
CASC4-201ENST00000299957 SAT1P21673 171 aa14.28□□□□□ -0.12
CASC4-201ENST00000299957 CDO1Q16878 200 aa14.28□□□□□ -0.12
CASC4-201ENST00000299957 C6orf163Q5TEZ5 329 aa14.28□□□□□ -0.12
CASC4-201ENST00000299957 TMEM179Q6ZVK1 233 aa14.28□□□□□ -0.12
CASC4-201ENST00000299957 DDX23Q9BUQ8 820 aaKnown RBP14.28□□□□□ -0.12
CASC4-201ENST00000299957 PIK3C2AO00443 1686 aa14.28□□□□□ -0.12
CASC4-201ENST00000299957 MYO3BQ8WXR4 1341 aa14.28□□□□□ -0.12
CASC4-201ENST00000299957 A0A1W2PQJ5 194 aa14.27□□□□□ -0.12
CASC4-201ENST00000299957 KRT1P04264 644 aa14.27□□□□□ -0.12
CASC4-201ENST00000299957 ACOT2P49753 483 aa14.27□□□□□ -0.12
CASC4-201ENST00000299957 FXR2P51116 673 aaKnown RBP eCLIP14.27□□□□□ -0.12
CASC4-201ENST00000299957 MEA1Q16626 185 aa14.27□□□□□ -0.12
CASC4-201ENST00000299957 SPATS2Q86XZ4 545 aaKnown RBP14.27□□□□□ -0.12
CASC4-201ENST00000299957 RAPGEF5Q92565 580 aa14.27□□□□□ -0.12
CASC4-201ENST00000299957 SEMA4AQ9H3S1 761 aa14.27□□□□□ -0.12
CASC4-201ENST00000299957 MSH4O15457 936 aa14.27□□□□□ -0.12
CASC4-201ENST00000299957 HAUS6Q7Z4H7 955 aa14.27□□□□□ -0.12
CASC4-201ENST00000299957 AGPAT1Q99943 283 aa14.27□□□□□ -0.12
CASC4-201ENST00000299957 CBWD1Q9BRT8 395 aa14.27□□□□□ -0.12
CASC4-201ENST00000299957 WDR11Q9BZH6 1224 aa14.27□□□□□ -0.12
CASC4-201ENST00000299957 ETNK1Q9HBU6 452 aa14.27□□□□□ -0.12
CASC4-201ENST00000299957 DDTLA6NHG4 134 aaPredicted RBP14.27□□□□□ -0.13
CASC4-201ENST00000299957 PDXKO00764 312 aa14.27□□□□□ -0.13
CASC4-201ENST00000299957 PSMD6Q15008 389 aa14.27□□□□□ -0.13
CASC4-201ENST00000299957 MUM1Q2TAK8 710 aa14.27□□□□□ -0.13
CASC4-201ENST00000299957 ANKMY2Q8IV38 441 aa14.27□□□□□ -0.13
CASC4-201ENST00000299957 C4orf32Q8N8J7 132 aa14.27□□□□□ -0.13
CASC4-201ENST00000299957 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.27□□□□□ -0.13
CASC4-201ENST00000299957 AENQ8WTP8 325 aaKnown RBP14.27□□□□□ -0.13
CASC4-201ENST00000299957 ADAM22Q9P0K1 906 aa14.27□□□□□ -0.13
CASC4-201ENST00000299957 TXNDC16Q9P2K2 825 aa14.27□□□□□ -0.13
CASC4-201ENST00000299957 NOP56O00567 594 aaKnown RBP14.26□□□□□ -0.13
CASC4-201ENST00000299957 ZBED4O75132 1171 aa14.26□□□□□ -0.13
CASC4-201ENST00000299957 PRELPP51888 382 aa14.26□□□□□ -0.13
CASC4-201ENST00000299957 KRT17Q04695 432 aa14.26□□□□□ -0.13
CASC4-201ENST00000299957 FRMD5Q7Z6J6 570 aa14.26□□□□□ -0.13
CASC4-201ENST00000299957 PARP9Q8IXQ6 854 aa14.26□□□□□ -0.13
CASC4-201ENST00000299957 THNSL1Q8IYQ7 743 aa14.26□□□□□ -0.13
CASC4-201ENST00000299957 DHX38Q92620 1227 aaKnown RBP14.26□□□□□ -0.13
CASC4-201ENST00000299957 KAT5Q92993 513 aa14.26□□□□□ -0.13
CASC4-201ENST00000299957 SLC40A1Q9NP59 571 aa14.26□□□□□ -0.13
CASC4-201ENST00000299957 hCG_1984214I3L0E3 225 aa14.26□□□□□ -0.13
CASC4-201ENST00000299957 IFI35P80217 286 aaPredicted RBP14.26□□□□□ -0.13
CASC4-201ENST00000299957 C6orf118Q5T5N4 469 aa14.26□□□□□ -0.13
CASC4-201ENST00000299957 LRRC34Q8IZ02 419 aa14.26□□□□□ -0.13
CASC4-201ENST00000299957 ZNF713Q8N859 430 aaPredicted RBP14.26□□□□□ -0.13
CASC4-201ENST00000299957 RUNDC3BQ96NL0 473 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms