RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 ASNSD1Q9NWL6 643 aa14.46□□□□□ -0.09
CHRFAM7A-201ENST00000299847 KIF28PB7ZC32 967 aa14.46□□□□□ -0.09
CHRFAM7A-201ENST00000299847 FTLP02792 175 aaPredicted RBP14.46□□□□□ -0.09
CHRFAM7A-201ENST00000299847 JAK3P52333 1124 aa14.46□□□□□ -0.09
CHRFAM7A-201ENST00000299847 PDIA2Q13087 525 aaKnown RBP14.46□□□□□ -0.09
CHRFAM7A-201ENST00000299847 MAPK6Q16659 721 aa14.46□□□□□ -0.09
CHRFAM7A-201ENST00000299847 TAS2R42Q7RTR8 314 aa14.46□□□□□ -0.09
CHRFAM7A-201ENST00000299847 UPF3AQ9H1J1 476 aaKnown RBP14.46□□□□□ -0.09
CHRFAM7A-201ENST00000299847 APOBEC2Q9Y235 224 aaKnown RBP14.46□□□□□ -0.09
CHRFAM7A-201ENST00000299847 UNC13AQ9UPW8 1703 aa14.46□□□□□ -0.09
CHRFAM7A-201ENST00000299847 HSPA6P17066 643 aa14.46□□□□□ -0.09
CHRFAM7A-201ENST00000299847 CIITAP33076 1130 aa14.46□□□□□ -0.09
CHRFAM7A-201ENST00000299847 PSMC1P62191 440 aaKnown RBP14.46□□□□□ -0.09
CHRFAM7A-201ENST00000299847 TTLL6Q8N841 843 aa14.46□□□□□ -0.09
CHRFAM7A-201ENST00000299847 CELF1Q92879 486 aaKnown RBP14.46□□□□□ -0.09
CHRFAM7A-201ENST00000299847 ZBTB18Q99592 522 aa14.46□□□□□ -0.09
CHRFAM7A-201ENST00000299847 MINPP1Q9UNW1 487 aa14.46□□□□□ -0.09
CHRFAM7A-201ENST00000299847 SCAF8Q9UPN6 1271 aaKnown RBP14.46□□□□□ -0.09
CHRFAM7A-201ENST00000299847 E5RI56 91 aa14.46□□□□□ -0.1
CHRFAM7A-201ENST00000299847 HUS1O60921 280 aa14.46□□□□□ -0.1
CHRFAM7A-201ENST00000299847 DNAJC8O75937 253 aaPredicted RBP14.46□□□□□ -0.1
CHRFAM7A-201ENST00000299847 ACTN3Q08043 901 aaPredicted RBP14.46□□□□□ -0.1
CHRFAM7A-201ENST00000299847 KIAA1755Q5JYT7 1200 aa14.46□□□□□ -0.1
CHRFAM7A-201ENST00000299847 ZNF467Q7Z7K2 595 aaPredicted RBP14.46□□□□□ -0.1
CHRFAM7A-201ENST00000299847 DHX40Q8IX18 779 aaKnown RBP14.46□□□□□ -0.1
CHRFAM7A-201ENST00000299847 TRMT2AQ8IZ69 625 aaKnown RBP14.46□□□□□ -0.1
CHRFAM7A-201ENST00000299847 GIPC2Q8TF65 315 aa14.46□□□□□ -0.1
CHRFAM7A-201ENST00000299847 TRIM15Q9C019 465 aa14.46□□□□□ -0.1
CHRFAM7A-201ENST00000299847 A0A087WUV0 522 aaPredicted RBP14.45□□□□□ -0.1
CHRFAM7A-201ENST00000299847 GOLGA8RI6L899 631 aa14.45□□□□□ -0.1
CHRFAM7A-201ENST00000299847 MASTLQ96GX5 879 aa14.45□□□□□ -0.1
CHRFAM7A-201ENST00000299847 ECT2Q9H8V3 914 aa14.45□□□□□ -0.1
CHRFAM7A-201ENST00000299847 HPS4Q9NQG7 708 aa14.45□□□□□ -0.1
CHRFAM7A-201ENST00000299847 SH3GLB2Q9NR46 395 aa14.45□□□□□ -0.1
CHRFAM7A-201ENST00000299847 CCDC151A5D8V7 595 aa14.45□□□□□ -0.1
CHRFAM7A-201ENST00000299847 LGALS16A8MUM7 142 aa14.45□□□□□ -0.1
CHRFAM7A-201ENST00000299847 ZNF185O15231 689 aa14.45□□□□□ -0.1
CHRFAM7A-201ENST00000299847 CTIFO43310 598 aaKnown RBP14.45□□□□□ -0.1
CHRFAM7A-201ENST00000299847 ATP8B1O43520 1251 aa14.45□□□□□ -0.1
CHRFAM7A-201ENST00000299847 ZRANB2O95218 330 aaKnown RBP eCLIP14.45□□□□□ -0.1
CHRFAM7A-201ENST00000299847 LIFRP42702 1097 aa14.45□□□□□ -0.1
CHRFAM7A-201ENST00000299847 DAB2P98082 770 aa14.45□□□□□ -0.1
CHRFAM7A-201ENST00000299847 RC3H1Q5TC82 1133 aaKnown RBP14.45□□□□□ -0.1
CHRFAM7A-201ENST00000299847 PPP4R3CPQ6ZMV5 832 aa14.45□□□□□ -0.1
CHRFAM7A-201ENST00000299847 STAG2Q8N3U4 1231 aa14.45□□□□□ -0.1
CHRFAM7A-201ENST00000299847 MS4A14Q96JA4 679 aa14.45□□□□□ -0.1
CHRFAM7A-201ENST00000299847 KIF17Q9P2E2 1029 aa14.45□□□□□ -0.1
CHRFAM7A-201ENST00000299847 SUN2Q9UH99 717 aa14.45□□□□□ -0.1
CHRFAM7A-201ENST00000299847 USP6P35125 1406 aa14.45□□□□□ -0.1
CHRFAM7A-201ENST00000299847 ZBTB7AO95365 584 aa14.45□□□□□ -0.1
CHRFAM7A-201ENST00000299847 PSMC5P62195 406 aa14.45□□□□□ -0.1
CHRFAM7A-201ENST00000299847 EGFL8Q99944 293 aa14.45□□□□□ -0.1
CHRFAM7A-201ENST00000299847 WARS2Q9UGM6 360 aaKnown RBP14.45□□□□□ -0.1
CHRFAM7A-201ENST00000299847 NLRP1Q9C000 1473 aa14.45□□□□□ -0.1
CHRFAM7A-201ENST00000299847 SKIP12755 728 aa14.45□□□□□ -0.1
CHRFAM7A-201ENST00000299847 GPSM2P81274 684 aa14.45□□□□□ -0.1
CHRFAM7A-201ENST00000299847 ARL6IP4Q66PJ3 421 aaKnown RBP14.45□□□□□ -0.1
CHRFAM7A-201ENST00000299847 OTUD5Q96G74 571 aa14.45□□□□□ -0.1
CHRFAM7A-201ENST00000299847 OSBPL9Q96SU4 736 aa14.45□□□□□ -0.1
CHRFAM7A-201ENST00000299847 DHX35Q9H5Z1 703 aaKnown RBP14.45□□□□□ -0.1
CHRFAM7A-201ENST00000299847 NDFIP2Q9NV92 336 aa14.45□□□□□ -0.1
CHRFAM7A-201ENST00000299847 SETD1BQ9UPS6 1966 aaKnown RBP14.45□□□□□ -0.1
CHRFAM7A-201ENST00000299847 SYNMO15061 1565 aa14.45□□□□□ -0.1
CHRFAM7A-201ENST00000299847 KDM5DQ9BY66 1539 aa14.45□□□□□ -0.1
CHRFAM7A-201ENST00000299847 ERVV-1B6SEH8 477 aa14.45□□□□□ -0.1
CHRFAM7A-201ENST00000299847 ATP9BO43861 1147 aa14.45□□□□□ -0.1
CHRFAM7A-201ENST00000299847 GUCY1A2P33402 732 aa14.45□□□□□ -0.1
CHRFAM7A-201ENST00000299847 DDIASQ8IXT1 998 aa14.45□□□□□ -0.1
CHRFAM7A-201ENST00000299847 XXYLT1Q8NBI6 393 aa14.45□□□□□ -0.1
CHRFAM7A-201ENST00000299847 OTULINQ96BN8 352 aa14.45□□□□□ -0.1
CHRFAM7A-201ENST00000299847 NR1H4Q96RI1 486 aaPredicted RBP14.45□□□□□ -0.1
CHRFAM7A-201ENST00000299847 TGS1Q96RS0 853 aaKnown RBP14.45□□□□□ -0.1
CHRFAM7A-201ENST00000299847 RNF14Q9UBS8 474 aa14.45□□□□□ -0.1
CHRFAM7A-201ENST00000299847 HPCAL4Q9UM19 191 aa14.45□□□□□ -0.1
CHRFAM7A-201ENST00000299847 MCF2P10911 925 aa14.44□□□□□ -0.1
CHRFAM7A-201ENST00000299847 PAPOLAP51003 745 aaKnown RBP14.44□□□□□ -0.1
CHRFAM7A-201ENST00000299847 EIF3BP55884 814 aaKnown RBP14.44□□□□□ -0.1
CHRFAM7A-201ENST00000299847 COG4Q9H9E3 785 aa14.44□□□□□ -0.1
CHRFAM7A-201ENST00000299847 SPATS2LQ9NUQ6 558 aaKnown RBP14.44□□□□□ -0.1
CHRFAM7A-201ENST00000299847 KRT37O76014 449 aa14.44□□□□□ -0.1
CHRFAM7A-201ENST00000299847 LDHAP00338 332 aaKnown RBP14.44□□□□□ -0.1
CHRFAM7A-201ENST00000299847 SPATA33Q96N06 139 aa14.44□□□□□ -0.1
CHRFAM7A-201ENST00000299847 MMP19Q99542 508 aa14.44□□□□□ -0.1
CHRFAM7A-201ENST00000299847 LXNQ9BS40 222 aa14.44□□□□□ -0.1
CHRFAM7A-201ENST00000299847 SP110Q9HB58 689 aa14.44□□□□□ -0.1
CHRFAM7A-201ENST00000299847 ATG3Q9NT62 314 aa14.44□□□□□ -0.1
CHRFAM7A-201ENST00000299847 STRIP2Q9ULQ0 834 aa14.44□□□□□ -0.1
CHRFAM7A-201ENST00000299847 hCG_2014768A0A024R1R8 64 aa14.44□□□□□ -0.1
CHRFAM7A-201ENST00000299847 SYCE1LA8MT33 242 aa14.44□□□□□ -0.1
CHRFAM7A-201ENST00000299847 ATP1A1P05023 1023 aaKnown RBP14.44□□□□□ -0.1
CHRFAM7A-201ENST00000299847 NCAPHQ15003 741 aa14.44□□□□□ -0.1
CHRFAM7A-201ENST00000299847 ACTR5Q9H9F9 607 aaPredicted RBP14.44□□□□□ -0.1
CHRFAM7A-201ENST00000299847 DISP1Q96F81 1524 aa14.44□□□□□ -0.1
CHRFAM7A-201ENST00000299847 TBCCQ15814 346 aa14.44□□□□□ -0.1
CHRFAM7A-201ENST00000299847 ACAD11Q709F0 780 aa14.44□□□□□ -0.1
CHRFAM7A-201ENST00000299847 CATSPER3Q86XQ3 398 aa14.44□□□□□ -0.1
CHRFAM7A-201ENST00000299847 FGFR1OP2Q9NVK5 253 aa14.44□□□□□ -0.1
CHRFAM7A-201ENST00000299847 FEM1BQ9UK73 627 aa14.44□□□□□ -0.1
CHRFAM7A-201ENST00000299847 MDM2Q00987 491 aaPredicted RBP14.44□□□□□ -0.1
CHRFAM7A-201ENST00000299847 ROR1Q01973 937 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms