RNA–Protein interactions for RNA: ENST00000299185.12

DEPDC4-201, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-201ENST00000299185 AFMP43652 599 aa7.24□□□□□ -1.25
DEPDC4-201ENST00000299185 STAT5BP51692 787 aa7.24□□□□□ -1.25
DEPDC4-201ENST00000299185 CLCN3P51790 818 aa7.24□□□□□ -1.25
DEPDC4-201ENST00000299185 ACLYP53396 1101 aa7.24□□□□□ -1.25
DEPDC4-201ENST00000299185 PSMC5P62195 406 aa7.24□□□□□ -1.25
DEPDC4-201ENST00000299185 PPFIA1Q13136 1202 aa7.24□□□□□ -1.25
DEPDC4-201ENST00000299185 NR6A1Q15406 480 aa7.24□□□□□ -1.25
DEPDC4-201ENST00000299185 KIAA0753Q2KHM9 967 aa7.24□□□□□ -1.25
DEPDC4-201ENST00000299185 KRT79Q5XKE5 535 aa7.24□□□□□ -1.25
DEPDC4-201ENST00000299185 ATL3Q6DD88 541 aa7.24□□□□□ -1.25
DEPDC4-201ENST00000299185 KCNV1Q6PIU1 500 aa7.24□□□□□ -1.25
DEPDC4-201ENST00000299185 CCDC73Q6ZRK6 1079 aa7.24□□□□□ -1.25
DEPDC4-201ENST00000299185 ANO5Q75V66 913 aa7.24□□□□□ -1.25
DEPDC4-201ENST00000299185 GPBP1Q86WP2 473 aa7.24□□□□□ -1.25
DEPDC4-201ENST00000299185 SMAP1Q8IYB5 467 aaPredicted RBP7.24□□□□□ -1.25
DEPDC4-201ENST00000299185 LRRC71Q8N4P6 559 aa7.24□□□□□ -1.25
DEPDC4-201ENST00000299185 ERMNQ8TAM6 284 aa7.24□□□□□ -1.25
DEPDC4-201ENST00000299185 ADAM32Q8TC27 787 aa7.24□□□□□ -1.25
DEPDC4-201ENST00000299185 LMBR1Q8WVP7 490 aa7.24□□□□□ -1.25
DEPDC4-201ENST00000299185 BSNDQ8WZ55 320 aa7.24□□□□□ -1.25
DEPDC4-201ENST00000299185 RAD54LQ92698 747 aa7.24□□□□□ -1.25
DEPDC4-201ENST00000299185 HPS3Q969F9 1004 aa7.24□□□□□ -1.25
DEPDC4-201ENST00000299185 CDK5RAP3Q96JB5 506 aa7.24□□□□□ -1.25
DEPDC4-201ENST00000299185 HSD17B14Q9BPX1 270 aa7.24□□□□□ -1.25
DEPDC4-201ENST00000299185 POLR3CQ9BUI4 534 aaPredicted RBP7.24□□□□□ -1.25
DEPDC4-201ENST00000299185 OXCT2Q9BYC2 517 aaPredicted RBP7.24□□□□□ -1.25
DEPDC4-201ENST00000299185 FGFBP2Q9BYJ0 223 aa7.24□□□□□ -1.25
DEPDC4-201ENST00000299185 BHMT2Q9H2M3 363 aa7.24□□□□□ -1.25
DEPDC4-201ENST00000299185 XPNPEP1Q9NQW7 623 aa7.24□□□□□ -1.25
DEPDC4-201ENST00000299185 SETD4Q9NVD3 440 aa7.24□□□□□ -1.25
DEPDC4-201ENST00000299185 HDAC6Q9UBN7 1215 aa7.24□□□□□ -1.25
DEPDC4-201ENST00000299185 KCNH3Q9ULD8 1083 aa7.24□□□□□ -1.25
DEPDC4-201ENST00000299185 MORC2Q9Y6X9 1032 aaPredicted RBP7.24□□□□□ -1.25
DEPDC4-201ENST00000299185 SCN10AQ9Y5Y9 1956 aa7.24□□□□□ -1.25
DEPDC4-201ENST00000299185 ARHGEF35A5YM69 484 aa7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 GOLGA6L4A6NEF3 574 aa7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 MYMKA6NI61 221 aa7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 HAS3O00219 553 aa7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 PIK3R2O00459 728 aa7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 MAFGO15525 162 aa7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 TFRCP02786 760 aaKnown RBP7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 P4HBP07237 508 aaKnown RBP7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 PLA2G4BP0C869 781 aa7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 PDIA4P13667 645 aaKnown RBP7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 INSRRP14616 1297 aa7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 CMA1P23946 247 aa7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 CST5P28325 142 aaPredicted RBP7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 YWHABP31946 246 aaKnown RBP7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 SFNP31947 248 aa7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 TXLNAP40222 546 aa7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 SYKP43405 635 aa7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 QARSP47897 775 aaKnown RBP7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 CPT1AP50416 773 aa7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 UBE2HP62256 183 aa7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 TMEM62Q0P6H9 643 aa7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 PNOCQ13519 176 aa7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 SNW1Q13573 536 aaKnown RBP7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 EMC2Q15006 297 aa7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 GRIK4Q16099 956 aa7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 CAMK4Q16566 473 aa7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 DGKDQ16760 1214 aa7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 LONRF3Q496Y0 759 aa7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 XKR9Q5GH70 373 aa7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 RRAGBQ5VZM2 374 aa7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 FAM160B1Q5W0V3 765 aa7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 HAUS3Q68CZ6 603 aa7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 ADALQ6DHV7 355 aa7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 FMR1NBQ8N0W7 255 aaPredicted RBP7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 GIMAP8Q8ND71 665 aaPredicted RBP7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 ENGASEQ8NFI3 743 aa7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 ASAP3Q8TDY4 903 aa7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 ATP8B4Q8TF62 1192 aa7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 ATP6V0A1Q93050 837 aa7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 CTAGE1Q96RT6 745 aa7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 MTG1Q9BT17 334 aaPredicted RBP7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 KIFC3Q9BVG8 833 aa7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 CCSER1Q9C0I3 900 aa7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 FAM49AQ9H0Q0 323 aaPredicted RBP7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 AZI2Q9H6S1 392 aa7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 TUFT1Q9NNX1 390 aa7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 TRMT13Q9NUP7 481 aaKnown RBP7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 DACT1Q9NYF0 836 aa7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 FAM13BQ9NYF5 915 aa7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 OGDHLQ9ULD0 1010 aa7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 PHF24Q9UPV7 400 aa7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 MAFBQ9Y5Q3 323 aaPredicted RBP7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 KDM3AQ9Y4C1 1321 aa7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 ALPK3Q96L96 1907 aa7.23□□□□□ -1.25
DEPDC4-201ENST00000299185 KRTAP9-6A0A140TA67 174 aa7.22□□□□□ -1.25
DEPDC4-201ENST00000299185 FAM237AA0A1B0GTK4 181 aa7.22□□□□□ -1.25
DEPDC4-201ENST00000299185 KBTBD13C9JR72 458 aa7.22□□□□□ -1.25
DEPDC4-201ENST00000299185 H3BRB1 525 aa7.22□□□□□ -1.25
DEPDC4-201ENST00000299185 ZNF202O95125 648 aa7.22□□□□□ -1.25
DEPDC4-201ENST00000299185 SGPL1O95470 568 aa7.22□□□□□ -1.25
DEPDC4-201ENST00000299185 C22orf31O95567 290 aa7.22□□□□□ -1.25
DEPDC4-201ENST00000299185 EYA4O95677 639 aa7.22□□□□□ -1.25
DEPDC4-201ENST00000299185 CTSHP09668 335 aa7.22□□□□□ -1.25
DEPDC4-201ENST00000299185 CYP2C9P11712 490 aa7.22□□□□□ -1.25
DEPDC4-201ENST00000299185 CYP11B2P19099 503 aa7.22□□□□□ -1.25
DEPDC4-201ENST00000299185 RPA1P27694 616 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms