RNA–Protein interactions for RNA: ENST00000299084.8

SPRED1-201, Transcript of sprouty related EVH1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPRED1, Length 7,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED1-201ENST00000299084 ICE2Q659A1 982 aa15.23■□□□□ 0.03
SPRED1-201ENST00000299084 APOBEC2Q9Y235 224 aaKnown RBP15.23■□□□□ 0.03
SPRED1-201ENST00000299084 E7EWF7 191 aa15.23■□□□□ 0.03
SPRED1-201ENST00000299084 MOCS2O96007 188 aaPredicted RBP15.23■□□□□ 0.03
SPRED1-201ENST00000299084 IRF1P10914 325 aa15.23■□□□□ 0.03
SPRED1-201ENST00000299084 GPR1P46091 355 aa15.23■□□□□ 0.03
SPRED1-201ENST00000299084 SNX17Q15036 470 aa15.23■□□□□ 0.03
SPRED1-201ENST00000299084 CBX8Q9HC52 389 aa15.23■□□□□ 0.03
SPRED1-201ENST00000299084 PARD3Q8TEW0 1356 aa15.23■□□□□ 0.03
SPRED1-201ENST00000299084 GOLGA8IPA6NC78 632 aa15.23■□□□□ 0.03
SPRED1-201ENST00000299084 TNPO2O14787 897 aaKnown RBP15.23■□□□□ 0.03
SPRED1-201ENST00000299084 GCFC2P16383 781 aaKnown RBP15.23■□□□□ 0.03
SPRED1-201ENST00000299084 JAK3P52333 1124 aa15.23■□□□□ 0.03
SPRED1-201ENST00000299084 NAALADL2Q58DX5 795 aa15.23■□□□□ 0.03
SPRED1-201ENST00000299084 ITPRIPL1Q6GPH6 555 aa15.23■□□□□ 0.03
SPRED1-201ENST00000299084 RHPN2Q8IUC4 686 aa15.23■□□□□ 0.03
SPRED1-201ENST00000299084 WDR75Q8IWA0 830 aaKnown RBP15.23■□□□□ 0.03
SPRED1-201ENST00000299084 CARD9Q9H257 536 aa15.23■□□□□ 0.03
SPRED1-201ENST00000299084 MAD2L2Q9UI95 211 aa15.23■□□□□ 0.03
SPRED1-201ENST00000299084 SLC16A1P53985 500 aa15.23■□□□□ 0.03
SPRED1-201ENST00000299084 MRPS26Q9BYN8 205 aaKnown RBP15.23■□□□□ 0.03
SPRED1-201ENST00000299084 FOXP3Q9BZS1 431 aa15.23■□□□□ 0.03
SPRED1-201ENST00000299084 ARHGEF3Q9NR81 526 aa15.23■□□□□ 0.03
SPRED1-201ENST00000299084 ADA2Q9NZK5 511 aa15.23■□□□□ 0.03
SPRED1-201ENST00000299084 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.23■□□□□ 0.03
SPRED1-201ENST00000299084 ZMYM6O95789 1325 aa15.23■□□□□ 0.03
SPRED1-201ENST00000299084 RNASEH1O60930 286 aaKnown RBP15.22■□□□□ 0.03
SPRED1-201ENST00000299084 BBS9Q3SYG4 887 aa15.22■□□□□ 0.03
SPRED1-201ENST00000299084 NDUFB9Q9Y6M9 179 aa15.22■□□□□ 0.03
SPRED1-201ENST00000299084 P4HA2O15460 535 aa15.22■□□□□ 0.03
SPRED1-201ENST00000299084 LZTS3O60299 673 aaPredicted RBP15.22■□□□□ 0.03
SPRED1-201ENST00000299084 SKA1Q96BD8 255 aa15.22■□□□□ 0.03
SPRED1-201ENST00000299084 LCMT1Q9UIC8 334 aa15.22■□□□□ 0.03
SPRED1-201ENST00000299084 YEATS2Q9ULM3 1422 aa15.22■□□□□ 0.03
SPRED1-201ENST00000299084 RANBP1P43487 201 aa15.22■□□□□ 0.03
SPRED1-201ENST00000299084 CEP55Q53EZ4 464 aa15.22■□□□□ 0.03
SPRED1-201ENST00000299084 EFHC2Q5JST6 749 aa15.22■□□□□ 0.03
SPRED1-201ENST00000299084 SIK2Q9H0K1 926 aa15.22■□□□□ 0.03
SPRED1-201ENST00000299084 ALFQ53S48 1182 aa15.22■□□□□ 0.03
SPRED1-201ENST00000299084 ALS2CLQ60I27 953 aa15.22■□□□□ 0.03
SPRED1-201ENST00000299084 FAM117BQ6P1L5 589 aa15.22■□□□□ 0.03
SPRED1-201ENST00000299084 SENP2Q9HC62 589 aa15.22■□□□□ 0.03
SPRED1-201ENST00000299084 GTF2A1LQ9UNN4 478 aa15.22■□□□□ 0.03
SPRED1-201ENST00000299084 BBOX1O75936 387 aa15.22■□□□□ 0.03
SPRED1-201ENST00000299084 TRIP4Q15650 581 aaPredicted RBP15.22■□□□□ 0.03
SPRED1-201ENST00000299084 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.22■□□□□ 0.03
SPRED1-201ENST00000299084 GTPBP6O43824 516 aaPredicted RBP15.22■□□□□ 0.03
SPRED1-201ENST00000299084 ADCY3O60266 1144 aa15.22■□□□□ 0.03
SPRED1-201ENST00000299084 CAPN15O75808 1086 aa15.22■□□□□ 0.03
SPRED1-201ENST00000299084 LRG1P02750 347 aa15.22■□□□□ 0.03
SPRED1-201ENST00000299084 GTF2E2P29084 291 aaKnown RBP15.22■□□□□ 0.03
SPRED1-201ENST00000299084 SHROOM1Q2M3G4 852 aaPredicted RBP15.22■□□□□ 0.03
SPRED1-201ENST00000299084 CLYBLQ8N0X4 340 aa15.22■□□□□ 0.03
SPRED1-201ENST00000299084 EXO5Q9H790 373 aa15.22■□□□□ 0.03
SPRED1-201ENST00000299084 ENTPD7Q9NQZ7 604 aa15.22■□□□□ 0.03
SPRED1-201ENST00000299084 H0Y626 953 aa15.21■□□□□ 0.03
SPRED1-201ENST00000299084 TRIM16O95361 564 aa15.21■□□□□ 0.03
SPRED1-201ENST00000299084 VCLP18206 1134 aa15.21■□□□□ 0.03
SPRED1-201ENST00000299084 TBC1D1Q86TI0 1168 aaPredicted RBP15.21■□□□□ 0.03
SPRED1-201ENST00000299084 ZNF507Q8TCN5 953 aa15.21■□□□□ 0.03
SPRED1-201ENST00000299084 COG1Q8WTW3 980 aa15.21■□□□□ 0.03
SPRED1-201ENST00000299084 SYNCRIPO60506 623 aaKnown RBP15.21■□□□□ 0.03
SPRED1-201ENST00000299084 SNAP25P60880 206 aa15.21■□□□□ 0.03
SPRED1-201ENST00000299084 TRAF7Q6Q0C0 670 aa15.21■□□□□ 0.03
SPRED1-201ENST00000299084 SNX31Q8N9S9 440 aa15.21■□□□□ 0.03
SPRED1-201ENST00000299084 ZBTB38Q8NAP3 1195 aaPredicted RBP15.21■□□□□ 0.03
SPRED1-201ENST00000299084 RNASE11Q8TAA1 199 aaKnown RBP15.21■□□□□ 0.03
SPRED1-201ENST00000299084 FAM227BQ96M60 508 aa15.21■□□□□ 0.03
SPRED1-201ENST00000299084 FAM161BQ96MY7 647 aa15.21■□□□□ 0.03
SPRED1-201ENST00000299084 DESI2Q9BSY9 194 aa15.21■□□□□ 0.03
SPRED1-201ENST00000299084 RNF103-CHMP3A0A140T963 221 aa15.21■□□□□ 0.03
SPRED1-201ENST00000299084 GOLGA8TH3BQL2 631 aa15.21■□□□□ 0.03
SPRED1-201ENST00000299084 PIK3R2O00459 728 aa15.21■□□□□ 0.03
SPRED1-201ENST00000299084 MAPK13O15264 365 aa15.21■□□□□ 0.03
SPRED1-201ENST00000299084 SRGAP2O75044 1071 aa15.21■□□□□ 0.03
SPRED1-201ENST00000299084 KRT37O76014 449 aa15.21■□□□□ 0.03
SPRED1-201ENST00000299084 ASNSP08243 561 aa15.21■□□□□ 0.03
SPRED1-201ENST00000299084 EIF2AK2P19525 551 aaKnown RBP15.21■□□□□ 0.03
SPRED1-201ENST00000299084 SOAT1P35610 550 aa15.21■□□□□ 0.03
SPRED1-201ENST00000299084 SERPINB10P48595 397 aa15.21■□□□□ 0.03
SPRED1-201ENST00000299084 MXI1P50539 228 aa15.21■□□□□ 0.03
SPRED1-201ENST00000299084 CUL4AQ13619 759 aa15.21■□□□□ 0.03
SPRED1-201ENST00000299084 OSBPL6Q9BZF3 934 aa15.21■□□□□ 0.03
SPRED1-201ENST00000299084 ATP8A1Q9Y2Q0 1164 aa15.21■□□□□ 0.03
SPRED1-201ENST00000299084 GFPT2O94808 682 aa15.21■□□□□ 0.03
SPRED1-201ENST00000299084 CPA1P15085 419 aa15.21■□□□□ 0.03
SPRED1-201ENST00000299084 CHRNDQ07001 517 aa15.21■□□□□ 0.03
SPRED1-201ENST00000299084 AK8Q96MA6 479 aa15.21■□□□□ 0.03
SPRED1-201ENST00000299084 SH3GL3Q99963 347 aa15.21■□□□□ 0.03
SPRED1-201ENST00000299084 DSCC1Q9BVC3 393 aa15.21■□□□□ 0.03
SPRED1-201ENST00000299084 KATNAL1Q9BW62 490 aa15.21■□□□□ 0.03
SPRED1-201ENST00000299084 ZNF304Q9HCX3 659 aa15.21■□□□□ 0.03
SPRED1-201ENST00000299084 NPY2RP49146 381 aa15.21■□□□□ 0.03
SPRED1-201ENST00000299084 MDM2Q00987 491 aaPredicted RBP15.21■□□□□ 0.03
SPRED1-201ENST00000299084 USP39Q53GS9 565 aaKnown RBP15.21■□□□□ 0.03
SPRED1-201ENST00000299084 RGS9BPQ6ZS82 235 aa15.21■□□□□ 0.03
SPRED1-201ENST00000299084 CAMKK1Q8N5S9 505 aa15.21■□□□□ 0.03
SPRED1-201ENST00000299084 BCL2L14Q9BZR8 327 aa15.21■□□□□ 0.03
SPRED1-201ENST00000299084 COPEO14579 308 aa15.21■□□□□ 0.02
SPRED1-201ENST00000299084 EIF2S1P05198 315 aaKnown RBP15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms