RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 ITGB4P16144 1822 aa14.35□□□□□ -0.11
TNFRSF21-201ENST00000296861 MSH4O15457 936 aa14.34□□□□□ -0.11
TNFRSF21-201ENST00000296861 COMTP21964 271 aa14.34□□□□□ -0.11
TNFRSF21-201ENST00000296861 ABCB5Q2M3G0 1257 aa14.34□□□□□ -0.11
TNFRSF21-201ENST00000296861 CDC42EP5Q6NZY7 148 aa14.34□□□□□ -0.11
TNFRSF21-201ENST00000296861 ZNF449Q6P9G9 518 aa14.34□□□□□ -0.11
TNFRSF21-201ENST00000296861 TBC1D22AQ8WUA7 517 aa14.34□□□□□ -0.11
TNFRSF21-201ENST00000296861 ZKSCAN4Q969J2 545 aaPredicted RBP14.34□□□□□ -0.11
TNFRSF21-201ENST00000296861 DDX23Q9BUQ8 820 aaKnown RBP14.34□□□□□ -0.11
TNFRSF21-201ENST00000296861 VCPKMTQ9H867 229 aa14.34□□□□□ -0.11
TNFRSF21-201ENST00000296861 TPX2Q9ULW0 747 aaKnown RBP14.34□□□□□ -0.11
TNFRSF21-201ENST00000296861 DUOX1Q9NRD9 1551 aa14.34□□□□□ -0.11
TNFRSF21-201ENST00000296861 TCRBV7S2A1N4TA0A589 114 aa14.34□□□□□ -0.11
TNFRSF21-201ENST00000296861 SPAG7O75391 227 aa14.34□□□□□ -0.11
TNFRSF21-201ENST00000296861 BCRP11274 1271 aa14.34□□□□□ -0.11
TNFRSF21-201ENST00000296861 CREB1P16220 341 aa14.34□□□□□ -0.11
TNFRSF21-201ENST00000296861 BIRC3Q13489 604 aa14.34□□□□□ -0.11
TNFRSF21-201ENST00000296861 SGO2Q562F6 1265 aa14.34□□□□□ -0.11
TNFRSF21-201ENST00000296861 PPP4R3AQ6IN85 833 aa14.34□□□□□ -0.11
TNFRSF21-201ENST00000296861 ZNF662Q6ZS27 426 aa14.34□□□□□ -0.11
TNFRSF21-201ENST00000296861 VSIG1Q86XK7 387 aa14.34□□□□□ -0.11
TNFRSF21-201ENST00000296861 NAP1L3Q99457 506 aaPredicted RBP14.34□□□□□ -0.11
TNFRSF21-201ENST00000296861 LRRC4BQ9NT99 713 aa14.34□□□□□ -0.11
TNFRSF21-201ENST00000296861 DLG4P78352 724 aa14.34□□□□□ -0.11
TNFRSF21-201ENST00000296861 ITIH3Q06033 890 aa14.34□□□□□ -0.11
TNFRSF21-201ENST00000296861 KYNUQ16719 465 aa14.34□□□□□ -0.11
TNFRSF21-201ENST00000296861 ZCWPW2Q504Y3 356 aa14.34□□□□□ -0.11
TNFRSF21-201ENST00000296861 FAM102BQ5T8I3 360 aa14.34□□□□□ -0.11
TNFRSF21-201ENST00000296861 PRCCQ92733 491 aaPredicted RBP14.34□□□□□ -0.11
TNFRSF21-201ENST00000296861 ERP44Q9BS26 406 aa14.34□□□□□ -0.11
TNFRSF21-201ENST00000296861 ZNF577Q9BSK1 485 aa14.34□□□□□ -0.11
TNFRSF21-201ENST00000296861 NSRP1Q9H0G5 558 aaKnown RBP14.34□□□□□ -0.11
TNFRSF21-201ENST00000296861 DDTLA6NHG4 134 aaPredicted RBP14.33□□□□□ -0.11
TNFRSF21-201ENST00000296861 TM4SF1P30408 202 aa14.33□□□□□ -0.11
TNFRSF21-201ENST00000296861 SYCP2LQ5T4T6 812 aa14.33□□□□□ -0.11
TNFRSF21-201ENST00000296861 RBM26Q5T8P6 1007 aaKnown RBP14.33□□□□□ -0.11
TNFRSF21-201ENST00000296861 STXBP4Q6ZWJ1 553 aa14.33□□□□□ -0.11
TNFRSF21-201ENST00000296861 FRMD5Q7Z6J6 570 aa14.33□□□□□ -0.11
TNFRSF21-201ENST00000296861 ARHGEF2Q92974 986 aaKnown RBP14.33□□□□□ -0.11
TNFRSF21-201ENST00000296861 PI4K2AQ9BTU6 479 aa14.33□□□□□ -0.11
TNFRSF21-201ENST00000296861 COL14A1Q05707 1796 aaKnown RBP14.33□□□□□ -0.11
TNFRSF21-201ENST00000296861 RINT1Q6NUQ1 792 aa14.33□□□□□ -0.12
TNFRSF21-201ENST00000296861 LLGL2Q6P1M3 1020 aa14.33□□□□□ -0.12
TNFRSF21-201ENST00000296861 DPH6Q7L8W6 267 aa14.33□□□□□ -0.12
TNFRSF21-201ENST00000296861 GPRC5CQ9NQ84 441 aa14.33□□□□□ -0.12
TNFRSF21-201ENST00000296861 ABCB11O95342 1321 aa14.33□□□□□ -0.12
TNFRSF21-201ENST00000296861 GOLGA8SH3BPF8 625 aa14.33□□□□□ -0.12
TNFRSF21-201ENST00000296861 GOLGA8MH3BSY2 632 aa14.33□□□□□ -0.12
TNFRSF21-201ENST00000296861 TRAPPC3O43617 180 aa14.33□□□□□ -0.12
TNFRSF21-201ENST00000296861 FSBPO95073 299 aa14.33□□□□□ -0.12
TNFRSF21-201ENST00000296861 NDUFB10O96000 172 aa14.33□□□□□ -0.12
TNFRSF21-201ENST00000296861 ATF7P17544 494 aaPredicted RBP14.33□□□□□ -0.12
TNFRSF21-201ENST00000296861 KRT15P19012 456 aa14.33□□□□□ -0.12
TNFRSF21-201ENST00000296861 ECE1P42892 770 aa14.33□□□□□ -0.12
TNFRSF21-201ENST00000296861 MTFR1LQ9H019 292 aa14.33□□□□□ -0.12
TNFRSF21-201ENST00000296861 ABCF3Q9NUQ8 709 aa14.33□□□□□ -0.12
TNFRSF21-201ENST00000296861 SLC16A4O15374 487 aa14.32□□□□□ -0.12
TNFRSF21-201ENST00000296861 ELF1P32519 619 aa14.32□□□□□ -0.12
TNFRSF21-201ENST00000296861 SLC12A3P55017 1021 aa14.32□□□□□ -0.12
TNFRSF21-201ENST00000296861 PEX3P56589 373 aa14.32□□□□□ -0.12
TNFRSF21-201ENST00000296861 TMED2Q15363 201 aa14.32□□□□□ -0.12
TNFRSF21-201ENST00000296861 ANKRD20A8PQ5CZ79 823 aa14.32□□□□□ -0.12
TNFRSF21-201ENST00000296861 ZNF365Q70YC5 407 aa14.32□□□□□ -0.12
TNFRSF21-201ENST00000296861 FUKQ8N0W3 1084 aa14.32□□□□□ -0.12
TNFRSF21-201ENST00000296861 CSRNP1Q96S65 589 aa14.32□□□□□ -0.12
TNFRSF21-201ENST00000296861 CBWD1Q9BRT8 395 aa14.32□□□□□ -0.12
TNFRSF21-201ENST00000296861 TRIM33Q9UPN9 1127 aa14.32□□□□□ -0.12
TNFRSF21-201ENST00000296861 ESYT2A0FGR8 921 aa14.32□□□□□ -0.12
TNFRSF21-201ENST00000296861 PDXKO00764 312 aa14.32□□□□□ -0.12
TNFRSF21-201ENST00000296861 EDIL3O43854 480 aa14.32□□□□□ -0.12
TNFRSF21-201ENST00000296861 BMP3P12645 472 aa14.32□□□□□ -0.12
TNFRSF21-201ENST00000296861 YY1P25490 414 aa14.32□□□□□ -0.12
TNFRSF21-201ENST00000296861 SHMT1P34896 483 aa14.32□□□□□ -0.12
TNFRSF21-201ENST00000296861 SMTNP53814 917 aa14.32□□□□□ -0.12
TNFRSF21-201ENST00000296861 EPHA7Q15375 998 aa14.32□□□□□ -0.12
TNFRSF21-201ENST00000296861 SLC10A5Q5PT55 438 aa14.32□□□□□ -0.12
TNFRSF21-201ENST00000296861 RPAINQ86UA6 219 aa14.32□□□□□ -0.12
TNFRSF21-201ENST00000296861 SLC17A8Q8NDX2 589 aa14.32□□□□□ -0.12
TNFRSF21-201ENST00000296861 SUPT20HQ8NEM7 779 aa14.32□□□□□ -0.12
TNFRSF21-201ENST00000296861 DHX38Q92620 1227 aaKnown RBP14.32□□□□□ -0.12
TNFRSF21-201ENST00000296861 STAMBPL1Q96FJ0 436 aa14.32□□□□□ -0.12
TNFRSF21-201ENST00000296861 FBXO28Q9NVF7 368 aa14.32□□□□□ -0.12
TNFRSF21-201ENST00000296861 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.32□□□□□ -0.12
TNFRSF21-201ENST00000296861 SGPL1O95470 568 aa14.32□□□□□ -0.12
TNFRSF21-201ENST00000296861 PPP2R5AQ15172 486 aa14.32□□□□□ -0.12
TNFRSF21-201ENST00000296861 SYDE2Q5VT97 1194 aa14.32□□□□□ -0.12
TNFRSF21-201ENST00000296861 ZSWIM2Q8NEG5 633 aa14.32□□□□□ -0.12
TNFRSF21-201ENST00000296861 SCFD2Q8WU76 684 aa14.32□□□□□ -0.12
TNFRSF21-201ENST00000296861 NUP85Q9BW27 656 aa14.32□□□□□ -0.12
TNFRSF21-201ENST00000296861 ALG13Q9NP73 1137 aaKnown RBP14.32□□□□□ -0.12
TNFRSF21-201ENST00000296861 NKIRAS1Q9NYS0 192 aa14.32□□□□□ -0.12
TNFRSF21-201ENST00000296861 NUP98P52948 1817 aa14.31□□□□□ -0.12
TNFRSF21-201ENST00000296861 MYO3BQ8WXR4 1341 aa14.31□□□□□ -0.12
TNFRSF21-201ENST00000296861 CNTNAP4Q9C0A0 1308 aa14.31□□□□□ -0.12
TNFRSF21-201ENST00000296861 MYH14Q7Z406 1995 aaKnown RBP14.31□□□□□ -0.12
TNFRSF21-201ENST00000296861 DOT1LQ8TEK3 1739 aa14.31□□□□□ -0.12
TNFRSF21-201ENST00000296861 CICQ96RK0 1608 aaPredicted RBP14.31□□□□□ -0.12
TNFRSF21-201ENST00000296861 SLIT2O94813 1529 aa14.31□□□□□ -0.12
TNFRSF21-201ENST00000296861 LCA5LO95447 670 aa14.31□□□□□ -0.12
TNFRSF21-201ENST00000296861 RPL21P46778 160 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms