RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 TMEM143Q96AN5 459 aa17■□□□□ 0.31
LSM6-201ENST00000296581 HHIPL1Q96JK4 782 aa17■□□□□ 0.31
LSM6-201ENST00000296581 ABHD16BQ9H3Z7 469 aa17■□□□□ 0.31
LSM6-201ENST00000296581 CCDC66A2RUB6 948 aa16.99■□□□□ 0.31
LSM6-201ENST00000296581 EXOC3O60645 756 aa16.99■□□□□ 0.31
LSM6-201ENST00000296581 GLRA2P23416 452 aa16.99■□□□□ 0.31
LSM6-201ENST00000296581 ADCYAP1R1P41586 468 aa16.99■□□□□ 0.31
LSM6-201ENST00000296581 NAMPTP43490 491 aa16.99■□□□□ 0.31
LSM6-201ENST00000296581 MTF1Q14872 753 aa16.99■□□□□ 0.31
LSM6-201ENST00000296581 PPP2R5AQ15172 486 aa16.99■□□□□ 0.31
LSM6-201ENST00000296581 WDR59Q6PJI9 974 aa16.99■□□□□ 0.31
LSM6-201ENST00000296581 ZNF397Q8NF99 534 aaPredicted RBP16.99■□□□□ 0.31
LSM6-201ENST00000296581 PPTC7Q8NI37 304 aa16.99■□□□□ 0.31
LSM6-201ENST00000296581 CBWD1Q9BRT8 395 aa16.99■□□□□ 0.31
LSM6-201ENST00000296581 OGFRQ9NZT2 677 aa16.99■□□□□ 0.31
LSM6-201ENST00000296581 PPP2R2CQ9Y2T4 447 aa16.99■□□□□ 0.31
LSM6-201ENST00000296581 GTPBP10A4D1E9 387 aaKnown RBP16.99■□□□□ 0.31
LSM6-201ENST00000296581 ZBTB42B2RXF5 422 aa16.99■□□□□ 0.31
LSM6-201ENST00000296581 MAPK13O15264 365 aa16.99■□□□□ 0.31
LSM6-201ENST00000296581 ZSCAN12O43309 604 aa16.99■□□□□ 0.31
LSM6-201ENST00000296581 HOXC6P09630 235 aa16.99■□□□□ 0.31
LSM6-201ENST00000296581 HNRNPH3P31942 346 aaKnown RBP16.99■□□□□ 0.31
LSM6-201ENST00000296581 IRF5Q13568 498 aa16.99■□□□□ 0.31
LSM6-201ENST00000296581 DCAF17Q5H9S7 520 aaPredicted RBP16.99■□□□□ 0.31
LSM6-201ENST00000296581 GJC2Q5T442 439 aaPredicted RBP16.99■□□□□ 0.31
LSM6-201ENST00000296581 REXO1L1PQ8IX06 675 aa16.99■□□□□ 0.31
LSM6-201ENST00000296581 C16orf45Q96MC5 204 aaPredicted RBP16.99■□□□□ 0.31
LSM6-201ENST00000296581 ZFYVE28Q9HCC9 887 aa16.99■□□□□ 0.31
LSM6-201ENST00000296581 NOL4O94818 638 aa16.98■□□□□ 0.31
LSM6-201ENST00000296581 MARK3P27448 753 aa16.98■□□□□ 0.31
LSM6-201ENST00000296581 MCCD1P59942 119 aaPredicted RBP16.98■□□□□ 0.31
LSM6-201ENST00000296581 ACVR2BQ13705 512 aa16.98■□□□□ 0.31
LSM6-201ENST00000296581 TSR1Q2NL82 804 aaKnown RBP16.98■□□□□ 0.31
LSM6-201ENST00000296581 DUSP28Q4G0W2 176 aa16.98■□□□□ 0.31
LSM6-201ENST00000296581 TAS1R3Q7RTX0 852 aa16.98■□□□□ 0.31
LSM6-201ENST00000296581 EXOC8Q8IYI6 725 aa16.98■□□□□ 0.31
LSM6-201ENST00000296581 XXYLT1Q8NBI6 393 aa16.98■□□□□ 0.31
LSM6-201ENST00000296581 BAP1Q92560 729 aa16.98■□□□□ 0.31
LSM6-201ENST00000296581 USP6NLQ92738 828 aa16.98■□□□□ 0.31
LSM6-201ENST00000296581 LSM14BQ9BX40 385 aaKnown RBP16.98■□□□□ 0.31
LSM6-201ENST00000296581 HSPBP1Q9NZL4 362 aa16.98■□□□□ 0.31
LSM6-201ENST00000296581 IGKV6-21A0A0C4DH24 114 aa16.98■□□□□ 0.31
LSM6-201ENST00000296581 ANKRD63C9JTQ0 380 aa16.98■□□□□ 0.31
LSM6-201ENST00000296581 GAS2O43903 313 aaKnown RBP16.98■□□□□ 0.31
LSM6-201ENST00000296581 BRD2P25440 801 aaKnown RBP16.98■□□□□ 0.31
LSM6-201ENST00000296581 TM4SF4P48230 202 aa16.98■□□□□ 0.31
LSM6-201ENST00000296581 CDK17Q00537 523 aa16.98■□□□□ 0.31
LSM6-201ENST00000296581 TCERG1LQ5VWI1 586 aa16.98■□□□□ 0.31
LSM6-201ENST00000296581 DPY19L2P1Q6NXN4 242 aa16.98■□□□□ 0.31
LSM6-201ENST00000296581 PLCB1Q9NQ66 1216 aa16.98■□□□□ 0.31
LSM6-201ENST00000296581 CEP72Q9P209 647 aa16.98■□□□□ 0.31
LSM6-201ENST00000296581 ABT1Q9ULW3 272 aaKnown RBP16.98■□□□□ 0.31
LSM6-201ENST00000296581 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.97■□□□□ 0.31
LSM6-201ENST00000296581 HBP1O60381 514 aa16.97■□□□□ 0.31
LSM6-201ENST00000296581 CNGA1P29973 690 aa16.97■□□□□ 0.31
LSM6-201ENST00000296581 ADSSP30520 456 aa16.97■□□□□ 0.31
LSM6-201ENST00000296581 BFSP1Q12934 665 aa16.97■□□□□ 0.31
LSM6-201ENST00000296581 PTPN14Q15678 1187 aa16.97■□□□□ 0.31
LSM6-201ENST00000296581 BRDTQ58F21 947 aaPredicted RBP16.97■□□□□ 0.31
LSM6-201ENST00000296581 IQSEC1Q6DN90 963 aa16.97■□□□□ 0.31
LSM6-201ENST00000296581 CHP1Q99653 195 aa16.97■□□□□ 0.31
LSM6-201ENST00000296581 CRACR2AQ9BSW2 395 aa16.97■□□□□ 0.31
LSM6-201ENST00000296581 GANQ9H2C0 597 aa16.97■□□□□ 0.31
LSM6-201ENST00000296581 PCIF1Q9H4Z3 704 aa16.97■□□□□ 0.31
LSM6-201ENST00000296581 ERAP1Q9NZ08 941 aa16.97■□□□□ 0.31
LSM6-201ENST00000296581 PLAGL2Q9UPG8 496 aa16.97■□□□□ 0.31
LSM6-201ENST00000296581 ADGRG1Q9Y653 693 aa16.97■□□□□ 0.31
LSM6-201ENST00000296581 TMEM88BA6NKF7 163 aa16.96■□□□□ 0.31
LSM6-201ENST00000296581 LGALS2P05162 132 aa16.96■□□□□ 0.31
LSM6-201ENST00000296581 TNNT1P13805 278 aa16.96■□□□□ 0.31
LSM6-201ENST00000296581 SMPD1P17405 629 aa16.96■□□□□ 0.31
LSM6-201ENST00000296581 IER5Q5VY09 327 aa16.96■□□□□ 0.31
LSM6-201ENST00000296581 SLC39A4Q6P5W5 647 aa16.96■□□□□ 0.31
LSM6-201ENST00000296581 INTS8Q75QN2 995 aaKnown RBP16.96■□□□□ 0.31
LSM6-201ENST00000296581 ZNHIT6Q9NWK9 470 aaKnown RBP16.96■□□□□ 0.31
LSM6-201ENST00000296581 GOLGA6L9A6NEM1 432 aa16.96■□□□□ 0.31
LSM6-201ENST00000296581 CCDC175P0C221 793 aa16.96■□□□□ 0.31
LSM6-201ENST00000296581 HOXD8P13378 290 aaPredicted RBP16.96■□□□□ 0.31
LSM6-201ENST00000296581 PDXDC1Q6P996 788 aa16.96■□□□□ 0.31
LSM6-201ENST00000296581 DEPTORQ8TB45 409 aa16.96■□□□□ 0.31
LSM6-201ENST00000296581 AFG1LQ8WV93 481 aa16.96■□□□□ 0.31
LSM6-201ENST00000296581 TCP11Q8WWU5 503 aa16.96■□□□□ 0.31
LSM6-201ENST00000296581 JPH2Q9BR39 696 aaPredicted RBP16.96■□□□□ 0.31
LSM6-201ENST00000296581 DESI2Q9BSY9 194 aa16.96■□□□□ 0.31
LSM6-201ENST00000296581 KIF2AO00139 706 aaPredicted RBP16.95■□□□□ 0.3
LSM6-201ENST00000296581 PON1P27169 355 aa16.95■□□□□ 0.3
LSM6-201ENST00000296581 CRHR2Q13324 411 aa16.95■□□□□ 0.3
LSM6-201ENST00000296581 MKRN4PQ13434 485 aaPredicted RBP16.95■□□□□ 0.3
LSM6-201ENST00000296581 CAPSQ13938 189 aa16.95■□□□□ 0.3
LSM6-201ENST00000296581 EXOC3L4Q17RC7 722 aa16.95■□□□□ 0.3
LSM6-201ENST00000296581 GBP6Q6ZN66 633 aa16.95■□□□□ 0.3
LSM6-201ENST00000296581 TRPC6Q9Y210 931 aa16.95■□□□□ 0.3
LSM6-201ENST00000296581 TULP2O00295 520 aa16.95■□□□□ 0.3
LSM6-201ENST00000296581 PPFIA4O75335 1185 aa16.95■□□□□ 0.3
LSM6-201ENST00000296581 PIGRP01833 764 aa16.95■□□□□ 0.3
LSM6-201ENST00000296581 KRT13P13646 458 aa16.95■□□□□ 0.3
LSM6-201ENST00000296581 GARTP22102 1010 aa16.95■□□□□ 0.3
LSM6-201ENST00000296581 FMO5P49326 533 aa16.95■□□□□ 0.3
LSM6-201ENST00000296581 DRP2Q13474 957 aa16.95■□□□□ 0.3
LSM6-201ENST00000296581 CACNA2D4Q7Z3S7 1137 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms