RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 PPARGP37231 505 aaPredicted RBP18.97■□□□□ 0.63
CDC42EP3-201ENST00000295324 NNMTP40261 264 aa18.97■□□□□ 0.63
CDC42EP3-201ENST00000295324 COG7P83436 770 aa18.97■□□□□ 0.63
CDC42EP3-201ENST00000295324 KCNB1Q14721 858 aa18.97■□□□□ 0.63
CDC42EP3-201ENST00000295324 CABS1Q96KC9 395 aa18.97■□□□□ 0.63
CDC42EP3-201ENST00000295324 ZWILCHQ9H900 591 aa18.97■□□□□ 0.63
CDC42EP3-201ENST00000295324 NFIAQ12857 509 aa18.96■□□□□ 0.63
CDC42EP3-201ENST00000295324 SLIT1O75093 1534 aa18.96■□□□□ 0.63
CDC42EP3-201ENST00000295324 RPS6KA5O75582 802 aa18.96■□□□□ 0.63
CDC42EP3-201ENST00000295324 CYP2C9P11712 490 aa18.96■□□□□ 0.63
CDC42EP3-201ENST00000295324 RPS6P62753 249 aaKnown RBP18.96■□□□□ 0.63
CDC42EP3-201ENST00000295324 RAPH1Q70E73 1250 aa18.96■□□□□ 0.63
CDC42EP3-201ENST00000295324 EHD4Q9H223 541 aa18.96■□□□□ 0.63
CDC42EP3-201ENST00000295324 MROH8Q9H579 483 aa18.96■□□□□ 0.63
CDC42EP3-201ENST00000295324 ANAPC7Q9UJX3 599 aa18.96■□□□□ 0.63
CDC42EP3-201ENST00000295324 SOWAHDA6NJG2 315 aa18.96■□□□□ 0.63
CDC42EP3-201ENST00000295324 CHGBP05060 677 aa18.96■□□□□ 0.63
CDC42EP3-201ENST00000295324 FAM83AQ86UY5 434 aa18.96■□□□□ 0.63
CDC42EP3-201ENST00000295324 GAS2L3Q86XJ1 694 aa18.96■□□□□ 0.63
CDC42EP3-201ENST00000295324 UHMK1Q8TAS1 419 aaKnown RBP18.96■□□□□ 0.63
CDC42EP3-201ENST00000295324 TMEM143Q96AN5 459 aa18.96■□□□□ 0.63
CDC42EP3-201ENST00000295324 ZMYND12Q9H0C1 365 aa18.96■□□□□ 0.63
CDC42EP3-201ENST00000295324 ANGPTL3Q9Y5C1 460 aa18.96■□□□□ 0.63
CDC42EP3-201ENST00000295324 APBA1Q02410 837 aa18.96■□□□□ 0.63
CDC42EP3-201ENST00000295324 LLGL1Q15334 1064 aa18.96■□□□□ 0.63
CDC42EP3-201ENST00000295324 RAB44Q7Z6P3 723 aaPredicted RBP18.96■□□□□ 0.63
CDC42EP3-201ENST00000295324 GPRASP2Q96D09 838 aa18.96■□□□□ 0.63
CDC42EP3-201ENST00000295324 RBM41Q96IZ5 413 aaKnown RBP18.96■□□□□ 0.63
CDC42EP3-201ENST00000295324 INTS2Q9H0H0 1204 aaKnown RBP18.96■□□□□ 0.63
CDC42EP3-201ENST00000295324 IL1R1P14778 569 aa18.95■□□□□ 0.62
CDC42EP3-201ENST00000295324 PLEKHH3Q7Z736 793 aa18.95■□□□□ 0.62
CDC42EP3-201ENST00000295324 RDM1Q8NG50 284 aa18.95■□□□□ 0.62
CDC42EP3-201ENST00000295324 AFG1LQ8WV93 481 aa18.95■□□□□ 0.62
CDC42EP3-201ENST00000295324 HSPH1Q92598 858 aa18.95■□□□□ 0.62
CDC42EP3-201ENST00000295324 HPCAL4Q9UM19 191 aa18.95■□□□□ 0.62
CDC42EP3-201ENST00000295324 SART1O43290 800 aaKnown RBP18.95■□□□□ 0.62
CDC42EP3-201ENST00000295324 GPC5P78333 572 aa18.95■□□□□ 0.62
CDC42EP3-201ENST00000295324 MIF4GDA9UHW6 222 aaKnown RBP18.95■□□□□ 0.62
CDC42EP3-201ENST00000295324 GNA15P30679 374 aa18.95■□□□□ 0.62
CDC42EP3-201ENST00000295324 PRKCEQ02156 737 aa18.95■□□□□ 0.62
CDC42EP3-201ENST00000295324 TRIM72Q6ZMU5 477 aa18.95■□□□□ 0.62
CDC42EP3-201ENST00000295324 FNDC3AQ9Y2H6 1198 aaKnown RBP18.95■□□□□ 0.62
CDC42EP3-201ENST00000295324 BUB1BO60566 1050 aaPredicted RBP18.95■□□□□ 0.62
CDC42EP3-201ENST00000295324 ANTXR2P58335 489 aa18.95■□□□□ 0.62
CDC42EP3-201ENST00000295324 TJP3O95049 919 aa18.95■□□□□ 0.62
CDC42EP3-201ENST00000295324 EMC2Q15006 297 aa18.95■□□□□ 0.62
CDC42EP3-201ENST00000295324 POC1B-GALNT4F8VUJ3 575 aa18.94■□□□□ 0.62
CDC42EP3-201ENST00000295324 DDNO94850 711 aaPredicted RBP18.94■□□□□ 0.62
CDC42EP3-201ENST00000295324 SHC4Q6S5L8 630 aa18.94■□□□□ 0.62
CDC42EP3-201ENST00000295324 RPUSD2Q8IZ73 545 aaKnown RBP18.94■□□□□ 0.62
CDC42EP3-201ENST00000295324 C11orf70Q9BRQ4 267 aa18.94■□□□□ 0.62
CDC42EP3-201ENST00000295324 GOLPH3LQ9H4A5 285 aa18.94■□□□□ 0.62
CDC42EP3-201ENST00000295324 ALDH1A1P00352 501 aa18.94■□□□□ 0.62
CDC42EP3-201ENST00000295324 FGFR2P21802 821 aa18.94■□□□□ 0.62
CDC42EP3-201ENST00000295324 NMT1P30419 496 aaKnown RBP18.94■□□□□ 0.62
CDC42EP3-201ENST00000295324 KPNA2P52292 529 aaKnown RBP18.94■□□□□ 0.62
CDC42EP3-201ENST00000295324 FRMD5Q7Z6J6 570 aa18.94■□□□□ 0.62
CDC42EP3-201ENST00000295324 PASD1Q8IV76 773 aa18.94■□□□□ 0.62
CDC42EP3-201ENST00000295324 TTC13Q8NBP0 860 aa18.94■□□□□ 0.62
CDC42EP3-201ENST00000295324 RSRC1Q96IZ7 334 aaKnown RBP18.94■□□□□ 0.62
CDC42EP3-201ENST00000295324 TRIM9Q9C026 710 aa18.94■□□□□ 0.62
CDC42EP3-201ENST00000295324 FBXO2Q9UK22 296 aaPredicted RBP18.94■□□□□ 0.62
CDC42EP3-201ENST00000295324 ZRANB2O95218 330 aaKnown RBP eCLIP18.94■□□□□ 0.62
CDC42EP3-201ENST00000295324 NBPF9Q3BBW0 867 aa18.94■□□□□ 0.62
CDC42EP3-201ENST00000295324 ACER1Q8TDN7 264 aa18.94■□□□□ 0.62
CDC42EP3-201ENST00000295324 EMSYQ7Z589 1322 aa18.94■□□□□ 0.62
CDC42EP3-201ENST00000295324 RBP5P82980 135 aa18.93■□□□□ 0.62
CDC42EP3-201ENST00000295324 TEX2Q8IWB9 1127 aa18.93■□□□□ 0.62
CDC42EP3-201ENST00000295324 SAMD3Q8N6K7 520 aa18.93■□□□□ 0.62
CDC42EP3-201ENST00000295324 GLB1LQ6UWU2 654 aa18.93■□□□□ 0.62
CDC42EP3-201ENST00000295324 CNTNAP5Q8WYK1 1306 aa18.93■□□□□ 0.62
CDC42EP3-201ENST00000295324 HGSO14964 777 aaPredicted RBP18.93■□□□□ 0.62
CDC42EP3-201ENST00000295324 FBXO28Q9NVF7 368 aa18.93■□□□□ 0.62
CDC42EP3-201ENST00000295324 TADA2AO75478 443 aa18.93■□□□□ 0.62
CDC42EP3-201ENST00000295324 ZWINTO95229 277 aa18.93■□□□□ 0.62
CDC42EP3-201ENST00000295324 APOEP02649 317 aa18.93■□□□□ 0.62
CDC42EP3-201ENST00000295324 PRR29P0C7W0 189 aa18.93■□□□□ 0.62
CDC42EP3-201ENST00000295324 PLS3P13797 630 aa18.93■□□□□ 0.62
CDC42EP3-201ENST00000295324 PLTPP55058 493 aa18.93■□□□□ 0.62
CDC42EP3-201ENST00000295324 PSMC1P62191 440 aaKnown RBP18.93■□□□□ 0.62
CDC42EP3-201ENST00000295324 DRAP1Q14919 205 aaPredicted RBP18.93■□□□□ 0.62
CDC42EP3-201ENST00000295324 RABGGTAQ92696 567 aa18.93■□□□□ 0.62
CDC42EP3-201ENST00000295324 HDAC11Q96DB2 347 aa18.93■□□□□ 0.62
CDC42EP3-201ENST00000295324 BPIFA3Q9BQP9 254 aa18.93■□□□□ 0.62
CDC42EP3-201ENST00000295324 RTFDC1Q9BY42 306 aaPredicted RBP18.93■□□□□ 0.62
CDC42EP3-201ENST00000295324 GOLGA8KD6RF30 607 aa18.93■□□□□ 0.62
CDC42EP3-201ENST00000295324 TFRCP02786 760 aaKnown RBP18.93■□□□□ 0.62
CDC42EP3-201ENST00000295324 ADORA2BP29275 332 aa18.93■□□□□ 0.62
CDC42EP3-201ENST00000295324 NXNQ6DKJ4 435 aa18.93■□□□□ 0.62
CDC42EP3-201ENST00000295324 TAAR1Q96RJ0 339 aa18.93■□□□□ 0.62
CDC42EP3-201ENST00000295324 KCNH7Q9NS40 1196 aa18.93■□□□□ 0.62
CDC42EP3-201ENST00000295324 PRMT7Q9NVM4 692 aaPredicted RBP18.93■□□□□ 0.62
CDC42EP3-201ENST00000295324 DIS3Q9Y2L1 958 aaKnown RBP18.93■□□□□ 0.62
CDC42EP3-201ENST00000295324 RALAP11233 206 aa18.92■□□□□ 0.62
CDC42EP3-201ENST00000295324 ASPHQ12797 758 aa18.92■□□□□ 0.62
CDC42EP3-201ENST00000295324 C10orf67Q8IYJ2 551 aa18.92■□□□□ 0.62
CDC42EP3-201ENST00000295324 TLK1Q9UKI8 766 aa18.92■□□□□ 0.62
CDC42EP3-201ENST00000295324 NBPF12Q5TAG4 269 aaPredicted RBP18.92■□□□□ 0.62
CDC42EP3-201ENST00000295324 TXNRD3Q86VQ6 643 aa18.92■□□□□ 0.62
CDC42EP3-201ENST00000295324 GPC2Q8N158 579 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms