RNA–Protein interactions for RNA: ENST00000294623.8

FUBP1-201, Transcript of far upstream element binding protein 1, humanhuman

TSL 1 (best)

Gene FUBP1, Length 2,201 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP1-201ENST00000294623 NMRK1Q9NWW6 199 aa15.3■□□□□ 0.04
FUBP1-201ENST00000294623 DDX43Q9NXZ2 648 aaKnown RBP15.3■□□□□ 0.04
FUBP1-201ENST00000294623 WHRNQ9P202 907 aa15.3■□□□□ 0.04
FUBP1-201ENST00000294623 LRP2BPQ9P2M1 347 aa15.3■□□□□ 0.04
FUBP1-201ENST00000294623 ZNF212Q9UDV6 495 aa15.3■□□□□ 0.04
FUBP1-201ENST00000294623 SNX24Q9Y343 169 aa15.3■□□□□ 0.04
FUBP1-201ENST00000294623 CETN3O15182 167 aa15.29■□□□□ 0.04
FUBP1-201ENST00000294623 PYGBP11216 843 aa15.29■□□□□ 0.04
FUBP1-201ENST00000294623 KCNA3P22001 575 aa15.29■□□□□ 0.04
FUBP1-201ENST00000294623 CCDC6Q16204 474 aa15.29■□□□□ 0.04
FUBP1-201ENST00000294623 FAM26FQ5R3K3 315 aa15.29■□□□□ 0.04
FUBP1-201ENST00000294623 SYDE1Q6ZW31 735 aaPredicted RBP15.29■□□□□ 0.04
FUBP1-201ENST00000294623 ANKRD35Q8N283 1001 aa15.29■□□□□ 0.04
FUBP1-201ENST00000294623 UBL4BQ8N7F7 174 aa15.29■□□□□ 0.04
FUBP1-201ENST00000294623 SLCO2A1Q92959 643 aa15.29■□□□□ 0.04
FUBP1-201ENST00000294623 HAPLN3Q96S86 360 aa15.29■□□□□ 0.04
FUBP1-201ENST00000294623 PITPNM3Q9BZ71 974 aa15.29■□□□□ 0.04
FUBP1-201ENST00000294623 MYLK2Q9H1R3 596 aa15.29■□□□□ 0.04
FUBP1-201ENST00000294623 MMADHCQ9H3L0 296 aaPredicted RBP15.29■□□□□ 0.04
FUBP1-201ENST00000294623 PIDD1Q9HB75 910 aa15.29■□□□□ 0.04
FUBP1-201ENST00000294623 WNK3Q9BYP7 1800 aa15.29■□□□□ 0.04
FUBP1-201ENST00000294623 UCHL3P15374 230 aa15.29■□□□□ 0.04
FUBP1-201ENST00000294623 AP1B1Q10567 949 aa15.29■□□□□ 0.04
FUBP1-201ENST00000294623 ESCO1Q5FWF5 840 aa15.29■□□□□ 0.04
FUBP1-201ENST00000294623 C11orf63Q6NUN7 778 aa15.29■□□□□ 0.04
FUBP1-201ENST00000294623 ZNF365Q70YC5 407 aa15.29■□□□□ 0.04
FUBP1-201ENST00000294623 CCDC65Q8IXS2 484 aa15.29■□□□□ 0.04
FUBP1-201ENST00000294623 C12orf50Q8NA57 414 aaPredicted RBP15.29■□□□□ 0.04
FUBP1-201ENST00000294623 RIOK1Q9BRS2 568 aaKnown RBP15.29■□□□□ 0.04
FUBP1-201ENST00000294623 TBC1D10AQ9BXI6 508 aa15.29■□□□□ 0.04
FUBP1-201ENST00000294623 NDUFA13Q9P0J0 144 aa15.29■□□□□ 0.04
FUBP1-201ENST00000294623 MTUS1Q9ULD2 1270 aa15.29■□□□□ 0.04
FUBP1-201ENST00000294623 hCG_1984214I3L0E3 225 aa15.28■□□□□ 0.04
FUBP1-201ENST00000294623 RBM5P52756 815 aaKnown RBP eCLIP15.28■□□□□ 0.04
FUBP1-201ENST00000294623 JAM2P57087 298 aa15.28■□□□□ 0.04
FUBP1-201ENST00000294623 SLC34A1Q06495 639 aa15.28■□□□□ 0.04
FUBP1-201ENST00000294623 MGAT5Q09328 741 aa15.28■□□□□ 0.04
FUBP1-201ENST00000294623 CALCOCO2Q13137 446 aa15.28■□□□□ 0.04
FUBP1-201ENST00000294623 MTA1Q13330 715 aa15.28■□□□□ 0.04
FUBP1-201ENST00000294623 RCN2Q14257 317 aa15.28■□□□□ 0.04
FUBP1-201ENST00000294623 RRP1BQ14684 758 aaKnown RBP15.28■□□□□ 0.04
FUBP1-201ENST00000294623 SBK1Q52WX2 424 aa15.28■□□□□ 0.04
FUBP1-201ENST00000294623 SLC45A4Q5BKX6 768 aa15.28■□□□□ 0.04
FUBP1-201ENST00000294623 CGB2Q6NT52 195 aa15.28■□□□□ 0.04
FUBP1-201ENST00000294623 DPY19L2P1Q6NXN4 242 aa15.28■□□□□ 0.04
FUBP1-201ENST00000294623 RHOT2Q8IXI1 618 aa15.28■□□□□ 0.04
FUBP1-201ENST00000294623 ZNF713Q8N859 430 aaPredicted RBP15.28■□□□□ 0.04
FUBP1-201ENST00000294623 ANKLE1Q8NAG6 615 aa15.28■□□□□ 0.04
FUBP1-201ENST00000294623 PNMA5Q96PV4 448 aa15.28■□□□□ 0.04
FUBP1-201ENST00000294623 NDNQ99608 321 aa15.28■□□□□ 0.04
FUBP1-201ENST00000294623 CCDC77Q9BR77 488 aa15.28■□□□□ 0.04
FUBP1-201ENST00000294623 DDX23Q9BUQ8 820 aaKnown RBP15.28■□□□□ 0.04
FUBP1-201ENST00000294623 C6orf50Q9HD87 102 aa15.28■□□□□ 0.04
FUBP1-201ENST00000294623 TYW1Q9NV66 732 aaKnown RBP15.28■□□□□ 0.04
FUBP1-201ENST00000294623 ZMYND8Q9ULU4 1186 aaPredicted RBP15.28■□□□□ 0.04
FUBP1-201ENST00000294623 TRIM33Q9UPN9 1127 aa15.28■□□□□ 0.04
FUBP1-201ENST00000294623 PCDHA3Q9Y5H8 950 aa15.28■□□□□ 0.04
FUBP1-201ENST00000294623 ESYT2A0FGR8 921 aa15.28■□□□□ 0.04
FUBP1-201ENST00000294623 SMIM23A6NLE4 172 aa15.28■□□□□ 0.04
FUBP1-201ENST00000294623 CCDC166P0CW27 439 aa15.28■□□□□ 0.04
FUBP1-201ENST00000294623 BRAFP15056 766 aa15.28■□□□□ 0.04
FUBP1-201ENST00000294623 VCAM1P19320 739 aa15.28■□□□□ 0.04
FUBP1-201ENST00000294623 TAC1P20366 129 aa15.28■□□□□ 0.04
FUBP1-201ENST00000294623 RPL21P46778 160 aaKnown RBP15.28■□□□□ 0.04
FUBP1-201ENST00000294623 ARID5AQ03989 594 aa15.28■□□□□ 0.04
FUBP1-201ENST00000294623 KCNH2Q12809 1159 aa15.28■□□□□ 0.04
FUBP1-201ENST00000294623 COASYQ13057 564 aa15.28■□□□□ 0.04
FUBP1-201ENST00000294623 RNF220Q5VTB9 566 aa15.28■□□□□ 0.04
FUBP1-201ENST00000294623 IWS1Q96ST2 819 aa15.28■□□□□ 0.04
FUBP1-201ENST00000294623 ZBTB12Q9Y330 459 aaPredicted RBP15.28■□□□□ 0.04
FUBP1-201ENST00000294623 KDM3AQ9Y4C1 1321 aa15.27■□□□□ 0.04
FUBP1-201ENST00000294623 NHSL1Q5SYE7 1610 aa15.27■□□□□ 0.04
FUBP1-201ENST00000294623 TOGARAM1Q9Y4F4 1720 aa15.27■□□□□ 0.04
FUBP1-201ENST00000294623 ATP9AO75110 1047 aa15.27■□□□□ 0.04
FUBP1-201ENST00000294623 RASA1P20936 1047 aa15.27■□□□□ 0.04
FUBP1-201ENST00000294623 SMARCA1P28370 1054 aa15.27■□□□□ 0.04
FUBP1-201ENST00000294623 GSTT1P30711 240 aa15.27■□□□□ 0.04
FUBP1-201ENST00000294623 MAN1A1P33908 653 aa15.27■□□□□ 0.04
FUBP1-201ENST00000294623 PPARDQ03181 441 aa15.27■□□□□ 0.04
FUBP1-201ENST00000294623 KRT79Q5XKE5 535 aa15.27■□□□□ 0.04
FUBP1-201ENST00000294623 NLRP10Q86W26 655 aa15.27■□□□□ 0.04
FUBP1-201ENST00000294623 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.27■□□□□ 0.04
FUBP1-201ENST00000294623 SLC30A5Q8TAD4 765 aa15.27■□□□□ 0.04
FUBP1-201ENST00000294623 SLC7A6OSQ96CW6 309 aaPredicted RBP15.27■□□□□ 0.04
FUBP1-201ENST00000294623 ERP27Q96DN0 273 aa15.27■□□□□ 0.04
FUBP1-201ENST00000294623 CCDC87Q9NVE4 849 aa15.27■□□□□ 0.04
FUBP1-201ENST00000294623 ARPP21Q9UBL0 812 aaPredicted RBP15.27■□□□□ 0.04
FUBP1-201ENST00000294623 DNAJB4Q9UDY4 337 aa15.27■□□□□ 0.04
FUBP1-201ENST00000294623 GGT7Q9UJ14 662 aa15.27■□□□□ 0.04
FUBP1-201ENST00000294623 DBR1Q9UK59 544 aaKnown RBP15.27■□□□□ 0.04
FUBP1-201ENST00000294623 CACNA1SQ13698 1873 aa15.27■□□□□ 0.03
FUBP1-201ENST00000294623 A8MXQ7 604 aa15.27■□□□□ 0.03
FUBP1-201ENST00000294623 MAP3K7O43318 606 aa15.27■□□□□ 0.03
FUBP1-201ENST00000294623 CCNT1O60563 726 aaKnown RBP15.27■□□□□ 0.03
FUBP1-201ENST00000294623 CDH16O75309 829 aa15.27■□□□□ 0.03
FUBP1-201ENST00000294623 STAT1P42224 750 aa15.27■□□□□ 0.03
FUBP1-201ENST00000294623 EXOC3L4Q17RC7 722 aa15.27■□□□□ 0.03
FUBP1-201ENST00000294623 ACBD5Q5T8D3 534 aaPredicted RBP15.27■□□□□ 0.03
FUBP1-201ENST00000294623 BICDL1Q6ZP65 573 aa15.27■□□□□ 0.03
FUBP1-201ENST00000294623 C4orf50Q6ZRC1 276 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms