RNA–Protein interactions for RNA: ENST00000291300.8

HIF3A-203, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-203ENST00000291300 VAV2P52735 878 aa18.23■□□□□ 0.51
HIF3A-203ENST00000291300 MYBPC2Q14324 1141 aa18.23■□□□□ 0.51
HIF3A-203ENST00000291300 XXYLT1Q8NBI6 393 aa18.23■□□□□ 0.51
HIF3A-203ENST00000291300 GPRC5AQ8NFJ5 357 aa18.23■□□□□ 0.51
HIF3A-203ENST00000291300 NIFKQ9BYG3 293 aaKnown RBP18.23■□□□□ 0.51
HIF3A-203ENST00000291300 SALL4Q9UJQ4 1053 aa18.23■□□□□ 0.51
HIF3A-203ENST00000291300 PLXNA1Q9UIW2 1896 aa18.23■□□□□ 0.51
HIF3A-203ENST00000291300 MACROD2A1Z1Q3 448 aa18.23■□□□□ 0.51
HIF3A-203ENST00000291300 TULP1O00294 542 aaPredicted RBP18.23■□□□□ 0.51
HIF3A-203ENST00000291300 SERPING1P05155 500 aa18.23■□□□□ 0.51
HIF3A-203ENST00000291300 GLRA2P23416 452 aa18.23■□□□□ 0.51
HIF3A-203ENST00000291300 JAM2P57087 298 aa18.23■□□□□ 0.51
HIF3A-203ENST00000291300 PPP2R5AQ15172 486 aa18.23■□□□□ 0.51
HIF3A-203ENST00000291300 TARBP2Q15633 366 aaKnown RBP18.23■□□□□ 0.51
HIF3A-203ENST00000291300 CELF3Q5SZQ8 465 aaKnown RBP18.23■□□□□ 0.51
HIF3A-203ENST00000291300 CST9Q5W186 159 aa18.23■□□□□ 0.51
HIF3A-203ENST00000291300 LMO3Q8TAP4 145 aa18.23■□□□□ 0.51
HIF3A-203ENST00000291300 SEPT1Q8WYJ6 367 aa18.23■□□□□ 0.51
HIF3A-203ENST00000291300 ERO1AQ96HE7 468 aa18.23■□□□□ 0.51
HIF3A-203ENST00000291300 IFIH1Q9BYX4 1025 aaKnown RBP18.23■□□□□ 0.51
HIF3A-203ENST00000291300 ARHGAP28Q9P2N2 729 aa18.23■□□□□ 0.51
HIF3A-203ENST00000291300 EMSYQ7Z589 1322 aa18.23■□□□□ 0.51
HIF3A-203ENST00000291300 ENC1O14682 589 aa18.22■□□□□ 0.51
HIF3A-203ENST00000291300 ECM2O94769 699 aaPredicted RBP18.22■□□□□ 0.51
HIF3A-203ENST00000291300 EDN1P05305 212 aa18.22■□□□□ 0.51
HIF3A-203ENST00000291300 COPB2P35606 906 aa18.22■□□□□ 0.51
HIF3A-203ENST00000291300 GCLMP48507 274 aa18.22■□□□□ 0.51
HIF3A-203ENST00000291300 VAMP7P51809 220 aa18.22■□□□□ 0.51
HIF3A-203ENST00000291300 GTF2A2P52657 109 aa18.22■□□□□ 0.51
HIF3A-203ENST00000291300 MYL7Q01449 175 aa18.22■□□□□ 0.51
HIF3A-203ENST00000291300 SPA17Q15506 151 aa18.22■□□□□ 0.51
HIF3A-203ENST00000291300 ELF2Q15723 593 aa18.22■□□□□ 0.51
HIF3A-203ENST00000291300 ASIC2Q16515 512 aa18.22■□□□□ 0.51
HIF3A-203ENST00000291300 SLC9C1Q4G0N8 1177 aa18.22■□□□□ 0.51
HIF3A-203ENST00000291300 SHCBP1Q8NEM2 672 aa18.22■□□□□ 0.51
HIF3A-203ENST00000291300 MORC4Q8TE76 937 aa18.22■□□□□ 0.51
HIF3A-203ENST00000291300 TMEM174Q8WUU8 243 aa18.22■□□□□ 0.51
HIF3A-203ENST00000291300 ZBTB10Q96DT7 871 aa18.22■□□□□ 0.51
HIF3A-203ENST00000291300 POP1Q99575 1024 aaKnown RBP18.22■□□□□ 0.51
HIF3A-203ENST00000291300 INTS2Q9H0H0 1204 aaKnown RBP18.22■□□□□ 0.51
HIF3A-203ENST00000291300 NMRK2Q9NPI5 230 aa18.22■□□□□ 0.51
HIF3A-203ENST00000291300 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.22■□□□□ 0.51
HIF3A-203ENST00000291300 HDAC6Q9UBN7 1215 aa18.22■□□□□ 0.51
HIF3A-203ENST00000291300 PNMA3Q9UL41 463 aa18.22■□□□□ 0.51
HIF3A-203ENST00000291300 A0A087X0T9 212 aa18.22■□□□□ 0.51
HIF3A-203ENST00000291300 SSU72P8A0A1W2PR75 194 aa18.22■□□□□ 0.51
HIF3A-203ENST00000291300 FAM228BP0C875 321 aa18.22■□□□□ 0.51
HIF3A-203ENST00000291300 ADORA2AP29274 412 aa18.22■□□□□ 0.51
HIF3A-203ENST00000291300 PTK2Q05397 1052 aa18.22■□□□□ 0.51
HIF3A-203ENST00000291300 ERCC6LQ2NKX8 1250 aa18.22■□□□□ 0.51
HIF3A-203ENST00000291300 ZNF662Q6ZS27 426 aa18.22■□□□□ 0.51
HIF3A-203ENST00000291300 ARMCX2Q7L311 632 aa18.22■□□□□ 0.51
HIF3A-203ENST00000291300 ZNF571Q7Z3V5 609 aaPredicted RBP18.22■□□□□ 0.51
HIF3A-203ENST00000291300 AFAP1L1Q8TED9 768 aa18.22■□□□□ 0.51
HIF3A-203ENST00000291300 ANKRD7Q92527 254 aa18.22■□□□□ 0.51
HIF3A-203ENST00000291300 C17orf75Q9HAS0 396 aa18.22■□□□□ 0.51
HIF3A-203ENST00000291300 ZBTB42B2RXF5 422 aa18.21■□□□□ 0.51
HIF3A-203ENST00000291300 ARL2P36404 184 aa18.21■□□□□ 0.51
HIF3A-203ENST00000291300 RTP1P59025 263 aa18.21■□□□□ 0.51
HIF3A-203ENST00000291300 KLHL30Q0D2K2 578 aa18.21■□□□□ 0.51
HIF3A-203ENST00000291300 ZNF792Q3KQV3 632 aa18.21■□□□□ 0.51
HIF3A-203ENST00000291300 SPRYD7Q5W111 196 aa18.21■□□□□ 0.51
HIF3A-203ENST00000291300 PHLDB3Q6NSJ2 640 aa18.21■□□□□ 0.51
HIF3A-203ENST00000291300 ELMO3Q96BJ8 720 aa18.21■□□□□ 0.51
HIF3A-203ENST00000291300 SPAG5Q96R06 1193 aa18.21■□□□□ 0.51
HIF3A-203ENST00000291300 GPR88Q9GZN0 384 aa18.21■□□□□ 0.51
HIF3A-203ENST00000291300 NUCKS1Q9H1E3 243 aaKnown RBP18.21■□□□□ 0.51
HIF3A-203ENST00000291300 TOPORSQ9NS56 1045 aaPredicted RBP18.21■□□□□ 0.51
HIF3A-203ENST00000291300 ADAMTS1Q9UHI8 967 aa18.21■□□□□ 0.51
HIF3A-203ENST00000291300 IPO7O95373 1038 aaKnown RBP18.2■□□□□ 0.5
HIF3A-203ENST00000291300 SNRNP35Q16560 246 aaKnown RBP18.2■□□□□ 0.5
HIF3A-203ENST00000291300 PACSIN1Q9BY11 444 aa18.2■□□□□ 0.5
HIF3A-203ENST00000291300 HAPLN2Q9GZV7 340 aa18.2■□□□□ 0.5
HIF3A-203ENST00000291300 CAPN6Q9Y6Q1 641 aa18.2■□□□□ 0.5
HIF3A-203ENST00000291300 CTAGE9A4FU28 777 aa18.2■□□□□ 0.5
HIF3A-203ENST00000291300 RBAK-RBAKDNI3L0D1 243 aa18.2■□□□□ 0.5
HIF3A-203ENST00000291300 TXNP10599 105 aaKnown RBP18.2■□□□□ 0.5
HIF3A-203ENST00000291300 KRT13P13646 458 aa18.2■□□□□ 0.5
HIF3A-203ENST00000291300 MAGEA1P43355 309 aa18.2■□□□□ 0.5
HIF3A-203ENST00000291300 MKRN4PQ13434 485 aaPredicted RBP18.2■□□□□ 0.5
HIF3A-203ENST00000291300 INTS8Q75QN2 995 aaKnown RBP18.2■□□□□ 0.5
HIF3A-203ENST00000291300 SLC17A8Q8NDX2 589 aa18.2■□□□□ 0.5
HIF3A-203ENST00000291300 OLIG1Q8TAK6 271 aa18.2■□□□□ 0.5
HIF3A-203ENST00000291300 TRAPPC12Q8WVT3 735 aa18.2■□□□□ 0.5
HIF3A-203ENST00000291300 GLG1Q92896 1179 aa18.2■□□□□ 0.5
HIF3A-203ENST00000291300 CCDC127Q96BQ5 260 aa18.2■□□□□ 0.5
HIF3A-203ENST00000291300 HVCN1Q96D96 273 aa18.2■□□□□ 0.5
HIF3A-203ENST00000291300 IFT74Q96LB3 600 aa18.2■□□□□ 0.5
HIF3A-203ENST00000291300 SPATA33Q96N06 139 aa18.2■□□□□ 0.5
HIF3A-203ENST00000291300 NAPGQ99747 312 aaPredicted RBP18.2■□□□□ 0.5
HIF3A-203ENST00000291300 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.2■□□□□ 0.5
HIF3A-203ENST00000291300 EPC1Q9H2F5 836 aa18.2■□□□□ 0.5
HIF3A-203ENST00000291300 CGNQ9P2M7 1197 aaKnown RBP18.2■□□□□ 0.5
HIF3A-203ENST00000291300 DNAJC12Q9UKB3 198 aa18.2■□□□□ 0.5
HIF3A-203ENST00000291300 EXOC7Q9UPT5 735 aa18.2■□□□□ 0.5
HIF3A-203ENST00000291300 MYH10P35580 1976 aa18.19■□□□□ 0.5
HIF3A-203ENST00000291300 TTLL13PA6NNM8 815 aa18.19■□□□□ 0.5
HIF3A-203ENST00000291300 KRT86O43790 486 aa18.19■□□□□ 0.5
HIF3A-203ENST00000291300 ATP1A1P05023 1023 aaKnown RBP18.19■□□□□ 0.5
HIF3A-203ENST00000291300 MAMDC4Q6UXC1 1216 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms