RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 RBM46Q8TBY0 533 aaKnown RBP12.67□□□□□ -0.38
SHPRH-201ENST00000275233 ABCB6Q9NP58 842 aa12.67□□□□□ -0.38
SHPRH-201ENST00000275233 KDM6BO15054 1643 aa12.67□□□□□ -0.38
SHPRH-201ENST00000275233 COPEO14579 308 aa12.67□□□□□ -0.38
SHPRH-201ENST00000275233 CYP19A1P11511 503 aaPredicted RBP12.67□□□□□ -0.38
SHPRH-201ENST00000275233 GYS2P54840 703 aa12.67□□□□□ -0.38
SHPRH-201ENST00000275233 GPC5P78333 572 aa12.67□□□□□ -0.38
SHPRH-201ENST00000275233 RBBP7Q16576 425 aa12.67□□□□□ -0.38
SHPRH-201ENST00000275233 ASIC4Q96FT7 647 aa12.67□□□□□ -0.38
SHPRH-201ENST00000275233 NDFIP2Q9NV92 336 aa12.67□□□□□ -0.38
SHPRH-201ENST00000275233 KLHL11Q9NVR0 708 aa12.67□□□□□ -0.38
SHPRH-201ENST00000275233 GRIK1P39086 918 aa12.67□□□□□ -0.38
SHPRH-201ENST00000275233 PAPOLAP51003 745 aaKnown RBP12.67□□□□□ -0.38
SHPRH-201ENST00000275233 MRPL4Q9BYD3 311 aaKnown RBP12.67□□□□□ -0.38
SHPRH-201ENST00000275233 GCOM2Q9BZD3 368 aaPredicted RBP12.67□□□□□ -0.38
SHPRH-201ENST00000275233 SLC7A5P2Q9GIP4 190 aa12.67□□□□□ -0.38
SHPRH-201ENST00000275233 AKR1B1P15121 316 aa12.66□□□□□ -0.38
SHPRH-201ENST00000275233 HSPA6P17066 643 aa12.66□□□□□ -0.38
SHPRH-201ENST00000275233 HOXD10P28358 340 aa12.66□□□□□ -0.38
SHPRH-201ENST00000275233 SLC8A1P32418 973 aa12.66□□□□□ -0.38
SHPRH-201ENST00000275233 VCPP55072 806 aaKnown RBP12.66□□□□□ -0.38
SHPRH-201ENST00000275233 CUL4AQ13619 759 aa12.66□□□□□ -0.38
SHPRH-201ENST00000275233 LBRQ14739 615 aaKnown RBP12.66□□□□□ -0.38
SHPRH-201ENST00000275233 SPATS2Q86XZ4 545 aaKnown RBP12.66□□□□□ -0.38
SHPRH-201ENST00000275233 CRLF3Q8IUI8 442 aa12.66□□□□□ -0.38
SHPRH-201ENST00000275233 GLYCTKQ8IVS8 523 aa12.66□□□□□ -0.38
SHPRH-201ENST00000275233 SUFUQ9UMX1 484 aa12.66□□□□□ -0.38
SHPRH-201ENST00000275233 SAMD9LQ8IVG5 1584 aa12.66□□□□□ -0.38
SHPRH-201ENST00000275233 ZRANB2O95218 330 aaKnown RBP eCLIP12.66□□□□□ -0.387e-6■■■■■ 37.3
SHPRH-201ENST00000275233 TRIM49P0CI25 452 aa12.66□□□□□ -0.38
SHPRH-201ENST00000275233 TRIM49CP0CI26 452 aa12.66□□□□□ -0.38
SHPRH-201ENST00000275233 NNMTP40261 264 aa12.66□□□□□ -0.38
SHPRH-201ENST00000275233 KNOP1Q1ED39 458 aaKnown RBP12.66□□□□□ -0.38
SHPRH-201ENST00000275233 PODNQ7Z5L7 613 aa12.66□□□□□ -0.38
SHPRH-201ENST00000275233 RHOT2Q8IXI1 618 aa12.66□□□□□ -0.38
SHPRH-201ENST00000275233 ZNF564Q8TBZ8 553 aaPredicted RBP12.66□□□□□ -0.38
SHPRH-201ENST00000275233 INTS2Q9H0H0 1204 aaKnown RBP12.66□□□□□ -0.38
SHPRH-201ENST00000275233 DHX35Q9H5Z1 703 aaKnown RBP12.66□□□□□ -0.38
SHPRH-201ENST00000275233 ACAD9Q9H845 621 aa12.66□□□□□ -0.38
SHPRH-201ENST00000275233 NUGGCQ68CJ6 796 aa12.66□□□□□ -0.38
SHPRH-201ENST00000275233 VPS39Q96JC1 886 aa12.66□□□□□ -0.38
SHPRH-201ENST00000275233 CFAP69A5D8W1 941 aa12.66□□□□□ -0.38
SHPRH-201ENST00000275233 P4HBP07237 508 aaKnown RBP12.66□□□□□ -0.38
SHPRH-201ENST00000275233 HMBSP08397 361 aa12.66□□□□□ -0.38
SHPRH-201ENST00000275233 NR1D1P20393 614 aa12.66□□□□□ -0.38
SHPRH-201ENST00000275233 KRT76Q01546 638 aa12.66□□□□□ -0.38
SHPRH-201ENST00000275233 AGR3Q8TD06 166 aa12.66□□□□□ -0.38
SHPRH-201ENST00000275233 PPP1R36Q96LQ0 422 aa12.66□□□□□ -0.38
SHPRH-201ENST00000275233 EGFL8Q99944 293 aa12.66□□□□□ -0.38
SHPRH-201ENST00000275233 ELAC2Q9BQ52 826 aaKnown RBP12.66□□□□□ -0.38
SHPRH-201ENST00000275233 RBAKQ9NYW8 714 aaPredicted RBP12.66□□□□□ -0.38
SHPRH-201ENST00000275233 CEP72Q9P209 647 aa12.66□□□□□ -0.38
SHPRH-201ENST00000275233 PIN4Q9Y237 131 aaKnown RBP12.66□□□□□ -0.38
SHPRH-201ENST00000275233 F8W8V4 182 aa12.66□□□□□ -0.38
SHPRH-201ENST00000275233 GRM4Q14833 912 aa12.66□□□□□ -0.38
SHPRH-201ENST00000275233 FAM102AQ5T9C2 384 aaPredicted RBP12.66□□□□□ -0.38
SHPRH-201ENST00000275233 DDX53Q86TM3 631 aaKnown RBP12.66□□□□□ -0.38
SHPRH-201ENST00000275233 MORC4Q8TE76 937 aa12.66□□□□□ -0.38
SHPRH-201ENST00000275233 SH3KBP1Q96B97 665 aa12.66□□□□□ -0.38
SHPRH-201ENST00000275233 EFHD1Q9BUP0 239 aa12.66□□□□□ -0.38
SHPRH-201ENST00000275233 SLC13A1Q9BZW2 595 aa12.66□□□□□ -0.38
SHPRH-201ENST00000275233 COG4Q9H9E3 785 aa12.66□□□□□ -0.38
SHPRH-201ENST00000275233 DRAP1Q14919 205 aaPredicted RBP12.65□□□□□ -0.38
SHPRH-201ENST00000275233 TRMT2AQ8IZ69 625 aaKnown RBP12.65□□□□□ -0.38
SHPRH-201ENST00000275233 CCNYL1Q8N7R7 359 aa12.65□□□□□ -0.38
SHPRH-201ENST00000275233 ABHD10Q9NUJ1 306 aa12.65□□□□□ -0.38
SHPRH-201ENST00000275233 ARL4CP56559 192 aa12.65□□□□□ -0.38
SHPRH-201ENST00000275233 PSMC5P62195 406 aa12.65□□□□□ -0.38
SHPRH-201ENST00000275233 ACBD5Q5T8D3 534 aaPredicted RBP12.65□□□□□ -0.38
SHPRH-201ENST00000275233 FAM47EQ6ZV65 393 aa12.65□□□□□ -0.38
SHPRH-201ENST00000275233 HPS3Q969F9 1004 aa12.65□□□□□ -0.38
SHPRH-201ENST00000275233 ZBTB18Q99592 522 aa12.65□□□□□ -0.38
SHPRH-201ENST00000275233 TNPO2O14787 897 aaKnown RBP12.65□□□□□ -0.38
SHPRH-201ENST00000275233 SDC4P31431 198 aa12.65□□□□□ -0.38
SHPRH-201ENST00000275233 KRT80Q6KB66 452 aa12.65□□□□□ -0.38
SHPRH-201ENST00000275233 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.65□□□□□ -0.38
SHPRH-201ENST00000275233 RAPGEF5Q92565 580 aa12.65□□□□□ -0.38
SHPRH-201ENST00000275233 PBXIP1Q96AQ6 731 aa12.65□□□□□ -0.38
SHPRH-201ENST00000275233 PPARGC1AQ9UBK2 798 aaKnown RBP12.65□□□□□ -0.38
SHPRH-201ENST00000275233 FTLP02792 175 aaPredicted RBP12.65□□□□□ -0.38
SHPRH-201ENST00000275233 IRF1P10914 325 aa12.65□□□□□ -0.38
SHPRH-201ENST00000275233 NFKBIAP25963 317 aa12.65□□□□□ -0.38
SHPRH-201ENST00000275233 MICALL2Q8IY33 904 aa12.65□□□□□ -0.38
SHPRH-201ENST00000275233 RNF149Q8NC42 400 aa12.65□□□□□ -0.38
SHPRH-201ENST00000275233 DNAJC6O75061 913 aa12.65□□□□□ -0.39
SHPRH-201ENST00000275233 CLEC10AQ8IUN9 316 aa12.65□□□□□ -0.39
SHPRH-201ENST00000275233 ZNF507Q8TCN5 953 aa12.65□□□□□ -0.39
SHPRH-201ENST00000275233 ULK4Q96C45 1275 aa12.65□□□□□ -0.39
SHPRH-201ENST00000275233 ZBTB12Q9Y330 459 aaPredicted RBP12.65□□□□□ -0.39
SHPRH-201ENST00000275233 RASA4BC9J798 803 aa12.64□□□□□ -0.39
SHPRH-201ENST00000275233 RASA4O43374 803 aa12.64□□□□□ -0.39
SHPRH-201ENST00000275233 GPS1Q13098 491 aa12.64□□□□□ -0.39
SHPRH-201ENST00000275233 NFIXQ14938 502 aa12.64□□□□□ -0.39
SHPRH-201ENST00000275233 PPM1NQ8N819 430 aa12.64□□□□□ -0.39
SHPRH-201ENST00000275233 RGL1Q9NZL6 768 aa12.64□□□□□ -0.39
SHPRH-201ENST00000275233 ARHGEF5Q12774 1597 aa12.64□□□□□ -0.39
SHPRH-201ENST00000275233 PRPF4O43172 522 aaKnown RBP eCLIP12.64□□□□□ -0.39
SHPRH-201ENST00000275233 R3HDM1Q15032 1099 aaKnown RBP12.64□□□□□ -0.39
SHPRH-201ENST00000275233 TBCCQ15814 346 aa12.64□□□□□ -0.39
SHPRH-201ENST00000275233 C6orf118Q5T5N4 469 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms