RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 KCNQ5Q9NR82 932 aa13.79□□□□□ -0.2
HERC6-202ENST00000273960 BSDC1Q9NW68 430 aaPredicted RBP13.79□□□□□ -0.2
HERC6-202ENST00000273960 SCOCQ9UIL1 159 aa13.79□□□□□ -0.2
HERC6-202ENST00000273960 LNPEPQ9UIQ6 1025 aa13.79□□□□□ -0.2
HERC6-202ENST00000273960 ATMINO43313 823 aaPredicted RBP13.79□□□□□ -0.2
HERC6-202ENST00000273960 AGTP01019 485 aa13.79□□□□□ -0.2
HERC6-202ENST00000273960 KLRC3Q07444 240 aa13.79□□□□□ -0.2
HERC6-202ENST00000273960 MTM1Q13496 603 aa13.79□□□□□ -0.2
HERC6-202ENST00000273960 CTTNQ14247 550 aaKnown RBP13.79□□□□□ -0.2
HERC6-202ENST00000273960 PLS1Q14651 629 aa13.79□□□□□ -0.2
HERC6-202ENST00000273960 MESDQ14696 234 aa13.79□□□□□ -0.2
HERC6-202ENST00000273960 SEPT2Q15019 361 aa13.79□□□□□ -0.2
HERC6-202ENST00000273960 NONOQ15233 471 aaKnown RBP eCLIP13.79□□□□□ -0.2
HERC6-202ENST00000273960 HHATQ5VTY9 493 aa13.79□□□□□ -0.2
HERC6-202ENST00000273960 USP17L2Q6R6M4 530 aa13.79□□□□□ -0.2
HERC6-202ENST00000273960 ZDHHC24Q6UX98 284 aa13.79□□□□□ -0.2
HERC6-202ENST00000273960 GALNT15Q8N3T1 639 aa13.79□□□□□ -0.2
HERC6-202ENST00000273960 GUF1Q8N442 669 aaKnown RBP13.79□□□□□ -0.2
HERC6-202ENST00000273960 LRRC8CQ8TDW0 803 aa13.79□□□□□ -0.2
HERC6-202ENST00000273960 STK32AQ8WU08 396 aa13.79□□□□□ -0.2
HERC6-202ENST00000273960 BTBD6Q96KE9 485 aa13.79□□□□□ -0.2
HERC6-202ENST00000273960 TAS2R14Q9NYV8 317 aa13.79□□□□□ -0.2
HERC6-202ENST00000273960 ASIC3Q9UHC3 531 aa13.79□□□□□ -0.2
HERC6-202ENST00000273960 HDAC9Q9UKV0 1011 aa13.79□□□□□ -0.2
HERC6-202ENST00000273960 CYTH3O43739 400 aa13.78□□□□□ -0.2
HERC6-202ENST00000273960 RPS6KA4O75676 772 aa13.78□□□□□ -0.2
HERC6-202ENST00000273960 ALADP13716 330 aa13.78□□□□□ -0.2
HERC6-202ENST00000273960 DEUP1Q05D60 604 aa13.78□□□□□ -0.2
HERC6-202ENST00000273960 RCN1Q15293 331 aa13.78□□□□□ -0.2
HERC6-202ENST00000273960 LRRC36Q1X8D7 754 aa13.78□□□□□ -0.2
HERC6-202ENST00000273960 CYP4X1Q8N118 509 aa13.78□□□□□ -0.2
HERC6-202ENST00000273960 RDH13Q8NBN7 331 aa13.78□□□□□ -0.2
HERC6-202ENST00000273960 C1orf54Q8WWF1 131 aa13.78□□□□□ -0.2
HERC6-202ENST00000273960 COA7Q96BR5 231 aa13.78□□□□□ -0.2
HERC6-202ENST00000273960 CENPTQ96BT3 561 aa13.78□□□□□ -0.2
HERC6-202ENST00000273960 ARHGEF26Q96DR7 871 aa13.78□□□□□ -0.2
HERC6-202ENST00000273960 RAB3IPQ96QF0 476 aaPredicted RBP13.78□□□□□ -0.2
HERC6-202ENST00000273960 TBC1D10AQ9BXI6 508 aa13.78□□□□□ -0.2
HERC6-202ENST00000273960 VCXQ9H320 206 aa13.78□□□□□ -0.2
HERC6-202ENST00000273960 USP40Q9NVE5 1235 aa13.78□□□□□ -0.2
HERC6-202ENST00000273960 NKIRAS1Q9NYS0 192 aa13.78□□□□□ -0.2
HERC6-202ENST00000273960 NARFQ9UHQ1 456 aa13.78□□□□□ -0.2
HERC6-202ENST00000273960 EP400Q96L91 3159 aa13.78□□□□□ -0.2
HERC6-202ENST00000273960 NVLO15381 856 aaKnown RBP13.78□□□□□ -0.2
HERC6-202ENST00000273960 SLC37A4O43826 429 aa13.78□□□□□ -0.2
HERC6-202ENST00000273960 DDAH1O94760 285 aa13.78□□□□□ -0.2
HERC6-202ENST00000273960 PPP2R5BQ15173 497 aa13.78□□□□□ -0.2
HERC6-202ENST00000273960 TMED2Q15363 201 aa13.78□□□□□ -0.2
HERC6-202ENST00000273960 ECM1Q16610 540 aa13.78□□□□□ -0.2
HERC6-202ENST00000273960 CERKLQ49MI3 558 aaPredicted RBP13.78□□□□□ -0.2
HERC6-202ENST00000273960 KIFAP3Q92845 792 aa13.78□□□□□ -0.2
HERC6-202ENST00000273960 PNMA5Q96PV4 448 aa13.78□□□□□ -0.2
HERC6-202ENST00000273960 DENND2DQ9H6A0 471 aaPredicted RBP13.78□□□□□ -0.2
HERC6-202ENST00000273960 ZDHHC18Q9NUE0 388 aa13.78□□□□□ -0.2
HERC6-202ENST00000273960 NMRK1Q9NWW6 199 aa13.78□□□□□ -0.2
HERC6-202ENST00000273960 PFASO15067 1338 aa13.78□□□□□ -0.2
HERC6-202ENST00000273960 RBAK-RBAKDNI3L0D1 243 aa13.78□□□□□ -0.2
HERC6-202ENST00000273960 MEIS1O00470 390 aa13.78□□□□□ -0.2
HERC6-202ENST00000273960 DDX3XO00571 662 aaKnown RBP eCLIP13.78□□□□□ -0.2
HERC6-202ENST00000273960 KIAA0391O15091 583 aaKnown RBP13.78□□□□□ -0.2
HERC6-202ENST00000273960 RIPK2O43353 540 aa13.78□□□□□ -0.2
HERC6-202ENST00000273960 KRT36O76013 467 aa13.78□□□□□ -0.2
HERC6-202ENST00000273960 CACNA2D1P54289 1103 aa13.78□□□□□ -0.2
HERC6-202ENST00000273960 MRPS35P82673 323 aaKnown RBP13.78□□□□□ -0.2
HERC6-202ENST00000273960 OVGP1Q12889 678 aa13.78□□□□□ -0.2
HERC6-202ENST00000273960 SLC35G1Q2M3R5 365 aa13.78□□□□□ -0.2
HERC6-202ENST00000273960 KRT79Q5XKE5 535 aa13.78□□□□□ -0.2
HERC6-202ENST00000273960 IRF2BP2Q7Z5L9 587 aa13.78□□□□□ -0.2
HERC6-202ENST00000273960 VPS36Q86VN1 386 aa13.78□□□□□ -0.2
HERC6-202ENST00000273960 ZNF444Q8N0Y2 327 aaPredicted RBP13.78□□□□□ -0.2
HERC6-202ENST00000273960 TMX4Q9H1E5 349 aaPredicted RBP13.78□□□□□ -0.2
HERC6-202ENST00000273960 CTTNBP2NLQ9P2B4 639 aa13.78□□□□□ -0.2
HERC6-202ENST00000273960 SFI1A8K8P3 1242 aa13.77□□□□□ -0.2
HERC6-202ENST00000273960 ATP6V1C1P21283 382 aa13.77□□□□□ -0.2
HERC6-202ENST00000273960 KHDC1Q4VXA5 237 aaKnown RBP13.77□□□□□ -0.2
HERC6-202ENST00000273960 DUPD1Q68J44 220 aa13.77□□□□□ -0.2
HERC6-202ENST00000273960 CCDC137Q6PK04 289 aaKnown RBP13.77□□□□□ -0.2
HERC6-202ENST00000273960 CLEC4GQ6UXB4 293 aa13.77□□□□□ -0.2
HERC6-202ENST00000273960 NEK8Q86SG6 692 aa13.77□□□□□ -0.2
HERC6-202ENST00000273960 SCYL3Q8IZE3 742 aa13.77□□□□□ -0.2
HERC6-202ENST00000273960 DRAXINQ8NBI3 349 aaPredicted RBP13.77□□□□□ -0.2
HERC6-202ENST00000273960 PGM2Q96G03 612 aa13.77□□□□□ -0.2
HERC6-202ENST00000273960 C9orf72Q96LT7 481 aa13.77□□□□□ -0.2
HERC6-202ENST00000273960 LRRC37BQ96QE4 947 aa13.77□□□□□ -0.2
HERC6-202ENST00000273960 QTRT2Q9H974 415 aaKnown RBP13.77□□□□□ -0.2
HERC6-202ENST00000273960 WDR35Q9P2L0 1181 aa13.77□□□□□ -0.2
HERC6-202ENST00000273960 RASAL2Q9UJF2 1139 aa13.77□□□□□ -0.2
HERC6-202ENST00000273960 UNC5CO95185 931 aa13.77□□□□□ -0.21
HERC6-202ENST00000273960 CPA2P48052 419 aa13.77□□□□□ -0.21
HERC6-202ENST00000273960 LRRC63Q05C16 580 aa13.77□□□□□ -0.21
HERC6-202ENST00000273960 GALNTL6Q49A17 601 aa13.77□□□□□ -0.21
HERC6-202ENST00000273960 ANKLE1Q8NAG6 615 aa13.77□□□□□ -0.21
HERC6-202ENST00000273960 RBM41Q96IZ5 413 aaKnown RBP13.77□□□□□ -0.21
HERC6-202ENST00000273960 ECEL1O95672 775 aa13.77□□□□□ -0.21
HERC6-202ENST00000273960 FOXB2Q5VYV0 432 aa13.77□□□□□ -0.21
HERC6-202ENST00000273960 TTC27Q6P3X3 843 aa13.77□□□□□ -0.21
HERC6-202ENST00000273960 PALB2Q86YC2 1186 aa13.77□□□□□ -0.21
HERC6-202ENST00000273960 KIAA0825Q8IV33 1275 aa13.77□□□□□ -0.21
HERC6-202ENST00000273960 MAIP1Q8WWC4 291 aa13.77□□□□□ -0.21
HERC6-202ENST00000273960 MOV10L1Q9BXT6 1211 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms