RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 PCDHA2Q9Y5H9 948 aa27.15■■□□□ 1.94
SSBP4-201ENST00000270061 CBFA2T2O43439 604 aa27.14■■□□□ 1.94
SSBP4-201ENST00000270061 CHMP2AO43633 222 aa27.14■■□□□ 1.94
SSBP4-201ENST00000270061 SLITRK3O94933 977 aa27.14■■□□□ 1.94
SSBP4-201ENST00000270061 CHRNA1P02708 482 aa27.14■■□□□ 1.94
SSBP4-201ENST00000270061 MYOGP15173 224 aa27.14■■□□□ 1.94
SSBP4-201ENST00000270061 SFNP31947 248 aa27.14■■□□□ 1.94
SSBP4-201ENST00000270061 GRIN2CQ14957 1233 aa27.14■■□□□ 1.94
SSBP4-201ENST00000270061 DRC7Q8IY82 874 aa27.14■■□□□ 1.94
SSBP4-201ENST00000270061 SYT2Q8N9I0 419 aaPredicted RBP27.14■■□□□ 1.94
SSBP4-201ENST00000270061 SPC24Q8NBT2 197 aa27.14■■□□□ 1.94
SSBP4-201ENST00000270061 NELFBQ8WX92 580 aa27.14■■□□□ 1.94
SSBP4-201ENST00000270061 SEPT8Q92599 483 aa27.14■■□□□ 1.94
SSBP4-201ENST00000270061 XPO4Q9C0E2 1151 aaKnown RBP27.14■■□□□ 1.94
SSBP4-201ENST00000270061 FAM49AQ9H0Q0 323 aaPredicted RBP27.14■■□□□ 1.94
SSBP4-201ENST00000270061 COL1A2P08123 1366 aa27.14■■□□□ 1.94
SSBP4-201ENST00000270061 RBAK-RBAKDNI3L0D1 243 aa27.14■■□□□ 1.93
SSBP4-201ENST00000270061 ATP4AP20648 1035 aa27.14■■□□□ 1.93
SSBP4-201ENST00000270061 JAK3P52333 1124 aa27.14■■□□□ 1.93
SSBP4-201ENST00000270061 DYMQ7RTS9 669 aa27.14■■□□□ 1.93
SSBP4-201ENST00000270061 ZSCAN30Q86W11 494 aa27.14■■□□□ 1.93
SSBP4-201ENST00000270061 NEK9Q8TD19 979 aa27.14■■□□□ 1.93
SSBP4-201ENST00000270061 BBXQ8WY36 941 aaPredicted RBP27.14■■□□□ 1.93
SSBP4-201ENST00000270061 PSMA7O14818 248 aa27.13■■□□□ 1.93
SSBP4-201ENST00000270061 STX17P56962 302 aa27.13■■□□□ 1.93
SSBP4-201ENST00000270061 DEFB103AP81534 67 aa27.13■■□□□ 1.93
SSBP4-201ENST00000270061 STK4Q13043 487 aa27.13■■□□□ 1.93
SSBP4-201ENST00000270061 ZNF484Q5JVG2 852 aa27.13■■□□□ 1.93
SSBP4-201ENST00000270061 CDKAL1Q5VV42 579 aa27.13■■□□□ 1.93
SSBP4-201ENST00000270061 MTHFD1LQ6UB35 978 aa27.13■■□□□ 1.93
SSBP4-201ENST00000270061 TRMT1LQ7Z2T5 733 aaKnown RBP27.13■■□□□ 1.93
SSBP4-201ENST00000270061 MYLIPQ8WY64 445 aa27.13■■□□□ 1.93
SSBP4-201ENST00000270061 OSBPL7Q9BZF2 842 aa27.13■■□□□ 1.93
SSBP4-201ENST00000270061 SAMSN1Q9NSI8 373 aaKnown RBP27.13■■□□□ 1.93
SSBP4-201ENST00000270061 ESPNB1AK53 854 aa27.12■■□□□ 1.93
SSBP4-201ENST00000270061 EYA4O95677 639 aa27.12■■□□□ 1.93
SSBP4-201ENST00000270061 SERPINC1P01008 464 aa27.12■■□□□ 1.93
SSBP4-201ENST00000270061 CYP11B2P19099 503 aa27.12■■□□□ 1.93
SSBP4-201ENST00000270061 UBASH3AP57075 661 aa27.12■■□□□ 1.93
SSBP4-201ENST00000270061 MGAT3Q09327 533 aa27.12■■□□□ 1.93
SSBP4-201ENST00000270061 PPP2R2DQ66LE6 453 aa27.12■■□□□ 1.93
SSBP4-201ENST00000270061 IFIH1Q9BYX4 1025 aaKnown RBP27.12■■□□□ 1.93
SSBP4-201ENST00000270061 RGL1Q9NZL6 768 aa27.12■■□□□ 1.93
SSBP4-201ENST00000270061 IGSF9BQ9UPX0 1349 aa27.12■■□□□ 1.93
SSBP4-201ENST00000270061 CDK11BP21127 795 aaKnown RBP27.12■■□□□ 1.93
SSBP4-201ENST00000270061 KLRC1P26715 233 aa27.12■■□□□ 1.93
SSBP4-201ENST00000270061 MRPS6P82932 125 aaKnown RBP27.12■■□□□ 1.93
SSBP4-201ENST00000270061 IER5Q5VY09 327 aa27.12■■□□□ 1.93
SSBP4-201ENST00000270061 GPBP1Q86WP2 473 aa27.12■■□□□ 1.93
SSBP4-201ENST00000270061 FAM167AQ96KS9 214 aa27.12■■□□□ 1.93
SSBP4-201ENST00000270061 CDY2AQ9Y6F7 541 aa27.12■■□□□ 1.93
SSBP4-201ENST00000270061 TRANK1O15050 2925 aa27.11■■□□□ 1.93
SSBP4-201ENST00000270061 SMIM35A0A1B0GVV1 85 aa27.11■■□□□ 1.93
SSBP4-201ENST00000270061 CYP4A11Q02928 519 aa27.11■■□□□ 1.93
SSBP4-201ENST00000270061 MIER3Q7Z3K6 550 aa27.11■■□□□ 1.93
SSBP4-201ENST00000270061 RDM1Q8NG50 284 aa27.11■■□□□ 1.93
SSBP4-201ENST00000270061 APBB2Q92870 758 aa27.11■■□□□ 1.93
SSBP4-201ENST00000270061 DYDC2Q96IM9 177 aa27.11■■□□□ 1.93
SSBP4-201ENST00000270061 ZBED2Q9BTP6 218 aa27.11■■□□□ 1.93
SSBP4-201ENST00000270061 ZKSCAN5Q9Y2L8 839 aa27.11■■□□□ 1.93
SSBP4-201ENST00000270061 UNC80Q8N2C7 3258 aa27.1■■□□□ 1.93
SSBP4-201ENST00000270061 FRMD3A2A2Y4 597 aa27.1■■□□□ 1.93
SSBP4-201ENST00000270061 M0QZ92 97 aa27.1■■□□□ 1.93
SSBP4-201ENST00000270061 TLL1O43897 1013 aa27.1■■□□□ 1.93
SSBP4-201ENST00000270061 SSBP05455 408 aaKnown RBP eCLIP27.1■■□□□ 1.93
SSBP4-201ENST00000270061 CA3P07451 260 aa27.1■■□□□ 1.93
SSBP4-201ENST00000270061 GHRP10912 638 aa27.1■■□□□ 1.93
SSBP4-201ENST00000270061 TMCO2Q7Z6W1 182 aaPredicted RBP27.1■■□□□ 1.93
SSBP4-201ENST00000270061 KIAA0895Q8NCT3 520 aa27.1■■□□□ 1.93
SSBP4-201ENST00000270061 IMPACTQ9P2X3 320 aa27.1■■□□□ 1.93
SSBP4-201ENST00000270061 MAPK8IP1Q9UQF2 711 aa27.1■■□□□ 1.93
SSBP4-201ENST00000270061 ZBTB42B2RXF5 422 aa27.09■■□□□ 1.93
SSBP4-201ENST00000270061 FOSL2P15408 326 aa27.09■■□□□ 1.93
SSBP4-201ENST00000270061 ARSHQ5FYA8 562 aa27.09■■□□□ 1.93
SSBP4-201ENST00000270061 CCDC65Q8IXS2 484 aa27.09■■□□□ 1.93
SSBP4-201ENST00000270061 A0A0C4DFX4 3053 aa27.09■■□□□ 1.93
SSBP4-201ENST00000270061 IDEP14735 1019 aa27.09■■□□□ 1.93
SSBP4-201ENST00000270061 CCNE1P24864 410 aa27.09■■□□□ 1.93
SSBP4-201ENST00000270061 TMEM62Q0P6H9 643 aa27.09■■□□□ 1.93
SSBP4-201ENST00000270061 MKRN4PQ13434 485 aaPredicted RBP27.09■■□□□ 1.93
SSBP4-201ENST00000270061 TPD52L1Q16890 204 aaPredicted RBP27.09■■□□□ 1.93
SSBP4-201ENST00000270061 LIN28BQ6ZN17 250 aaKnown RBP eCLIP27.09■■□□□ 1.93
SSBP4-201ENST00000270061 NME8Q8N427 588 aa27.09■■□□□ 1.93
SSBP4-201ENST00000270061 NACC1Q96RE7 527 aa27.09■■□□□ 1.93
SSBP4-201ENST00000270061 PANK4Q9NVE7 773 aa27.09■■□□□ 1.93
SSBP4-201ENST00000270061 EIF2AK3Q9NZJ5 1116 aaKnown RBP27.09■■□□□ 1.93
SSBP4-201ENST00000270061 BICDL2A1A5D9 508 aa27.08■■□□□ 1.93
SSBP4-201ENST00000270061 ZNF862O60290 1169 aa27.08■■□□□ 1.93
SSBP4-201ENST00000270061 GJB5O95377 273 aa27.08■■□□□ 1.93
SSBP4-201ENST00000270061 AMHP03971 560 aa27.08■■□□□ 1.93
SSBP4-201ENST00000270061 COASYQ13057 564 aa27.08■■□□□ 1.93
SSBP4-201ENST00000270061 CTTNQ14247 550 aaKnown RBP27.08■■□□□ 1.93
SSBP4-201ENST00000270061 LPIN1Q14693 890 aa27.08■■□□□ 1.93
SSBP4-201ENST00000270061 FBXO47Q5MNV8 452 aa27.08■■□□□ 1.93
SSBP4-201ENST00000270061 TPH2Q8IWU9 490 aa27.08■■□□□ 1.93
SSBP4-201ENST00000270061 GUF1Q8N442 669 aaKnown RBP27.08■■□□□ 1.93
SSBP4-201ENST00000270061 NAP1L5Q96NT1 182 aaPredicted RBP27.08■■□□□ 1.93
SSBP4-201ENST00000270061 TRPV2Q9Y5S1 764 aa27.08■■□□□ 1.93
SSBP4-201ENST00000270061 OATP04181 439 aa27.07■■□□□ 1.92
SSBP4-201ENST00000270061 PRKCEQ02156 737 aa27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms