RNA–Protein interactions for RNA: ENST00000265334.8

CDKL3-201, Transcript of cyclin dependent kinase like 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CDKL3, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-201ENST00000265334 PALMO75781 387 aa12.95□□□□□ -0.34
CDKL3-201ENST00000265334 SOX5P35711 763 aa12.95□□□□□ -0.34
CDKL3-201ENST00000265334 NPEPPSP55786 919 aa12.95□□□□□ -0.34
CDKL3-201ENST00000265334 C1orf220Q5T0J3 134 aa12.95□□□□□ -0.34
CDKL3-201ENST00000265334 UTP14CQ5TAP6 766 aaKnown RBP12.95□□□□□ -0.34
CDKL3-201ENST00000265334 MEI1Q5TIA1 1274 aa12.95□□□□□ -0.34
CDKL3-201ENST00000265334 ALKBH5Q6P6C2 394 aaKnown RBP12.95□□□□□ -0.34
CDKL3-201ENST00000265334 INTS8Q75QN2 995 aaKnown RBP12.95□□□□□ -0.34
CDKL3-201ENST00000265334 FASTKD5Q7L8L6 764 aaKnown RBP12.95□□□□□ -0.34
CDKL3-201ENST00000265334 CAGE1Q8TC20 777 aa12.95□□□□□ -0.34
CDKL3-201ENST00000265334 SH2D3AQ9BRG2 576 aa12.95□□□□□ -0.34
CDKL3-201ENST00000265334 INTS2Q9H0H0 1204 aaKnown RBP12.95□□□□□ -0.34
CDKL3-201ENST00000265334 PRDM10Q9NQV6 1147 aa12.95□□□□□ -0.34
CDKL3-201ENST00000265334 FBXO40Q9UH90 709 aa12.95□□□□□ -0.34
CDKL3-201ENST00000265334 DNAJC12Q9UKB3 198 aa12.95□□□□□ -0.34
CDKL3-201ENST00000265334 INTUQ9ULD6 942 aa12.95□□□□□ -0.34
CDKL3-201ENST00000265334 GRID2IPA4D2P6 1211 aa12.94□□□□□ -0.34
CDKL3-201ENST00000265334 DDX3XO00571 662 aaKnown RBP eCLIP12.94□□□□□ -0.34
CDKL3-201ENST00000265334 PMM2O15305 246 aa12.94□□□□□ -0.34
CDKL3-201ENST00000265334 P4HA2O15460 535 aa12.94□□□□□ -0.34
CDKL3-201ENST00000265334 ZNF862O60290 1169 aa12.94□□□□□ -0.34
CDKL3-201ENST00000265334 STAM2O75886 525 aa12.94□□□□□ -0.34
CDKL3-201ENST00000265334 MCM3P25205 808 aa12.94□□□□□ -0.34
CDKL3-201ENST00000265334 IRX3P78415 501 aaPredicted RBP12.94□□□□□ -0.34
CDKL3-201ENST00000265334 PLS1Q14651 629 aa12.94□□□□□ -0.34
CDKL3-201ENST00000265334 XKR9Q5GH70 373 aa12.94□□□□□ -0.34
CDKL3-201ENST00000265334 HDXQ7Z353 690 aa12.94□□□□□ -0.34
CDKL3-201ENST00000265334 SPATA4Q8NEY3 305 aa12.94□□□□□ -0.34
CDKL3-201ENST00000265334 IWS1Q96ST2 819 aa12.94□□□□□ -0.34
CDKL3-201ENST00000265334 CBWD1Q9BRT8 395 aa12.94□□□□□ -0.34
CDKL3-201ENST00000265334 NTPCRQ9BSD7 190 aaKnown RBP12.94□□□□□ -0.34
CDKL3-201ENST00000265334 ASCC2Q9H1I8 757 aaPredicted RBP12.94□□□□□ -0.34
CDKL3-201ENST00000265334 GPRC5CQ9NQ84 441 aa12.94□□□□□ -0.34
CDKL3-201ENST00000265334 PDLIM7Q9NR12 457 aa12.94□□□□□ -0.34
CDKL3-201ENST00000265334 BTBD7Q9P203 1132 aa12.94□□□□□ -0.34
CDKL3-201ENST00000265334 RNF14Q9UBS8 474 aa12.94□□□□□ -0.34
CDKL3-201ENST00000265334 APEX2Q9UBZ4 518 aa12.94□□□□□ -0.34
CDKL3-201ENST00000265334 USP20Q9Y2K6 914 aa12.94□□□□□ -0.34
CDKL3-201ENST00000265334 EVI5O60447 810 aa12.94□□□□□ -0.34
CDKL3-201ENST00000265334 RFX1P22670 979 aa12.94□□□□□ -0.34
CDKL3-201ENST00000265334 MYL7Q01449 175 aa12.94□□□□□ -0.34
CDKL3-201ENST00000265334 DRAP1Q14919 205 aaPredicted RBP12.94□□□□□ -0.34
CDKL3-201ENST00000265334 PLA2G4FQ68DD2 849 aa12.94□□□□□ -0.34
CDKL3-201ENST00000265334 XXYLT1Q8NBI6 393 aa12.94□□□□□ -0.34
CDKL3-201ENST00000265334 TMEM161BQ8NDZ6 487 aa12.94□□□□□ -0.34
CDKL3-201ENST00000265334 HVCN1Q96D96 273 aa12.94□□□□□ -0.34
CDKL3-201ENST00000265334 HSPBP1Q9NZL4 362 aa12.94□□□□□ -0.34
CDKL3-201ENST00000265334 CLEC11AQ9Y240 323 aa12.94□□□□□ -0.34
CDKL3-201ENST00000265334 PFASO15067 1338 aa12.93□□□□□ -0.34
CDKL3-201ENST00000265334 A0A0A6YYK5 440 aaPredicted RBP12.93□□□□□ -0.34
CDKL3-201ENST00000265334 SPATA31C2B4DYI2 1134 aa12.93□□□□□ -0.34
CDKL3-201ENST00000265334 SLC16A4O15374 487 aa12.93□□□□□ -0.34
CDKL3-201ENST00000265334 POTEJP0CG39 1038 aa12.93□□□□□ -0.34
CDKL3-201ENST00000265334 KRT13P13646 458 aa12.93□□□□□ -0.34
CDKL3-201ENST00000265334 CXCR5P32302 372 aa12.93□□□□□ -0.34
CDKL3-201ENST00000265334 VAMP7P51809 220 aa12.93□□□□□ -0.34
CDKL3-201ENST00000265334 PEX3P56589 373 aa12.93□□□□□ -0.34
CDKL3-201ENST00000265334 FKBP1BP68106 108 aa12.93□□□□□ -0.34
CDKL3-201ENST00000265334 DLG4P78352 724 aa12.93□□□□□ -0.34
CDKL3-201ENST00000265334 DMTNQ08495 405 aa12.93□□□□□ -0.34
CDKL3-201ENST00000265334 C2orf54Q08AI8 447 aa12.93□□□□□ -0.34
CDKL3-201ENST00000265334 SMC1AQ14683 1233 aaKnown RBP12.93□□□□□ -0.34
CDKL3-201ENST00000265334 TERF2Q15554 542 aa12.93□□□□□ -0.34
CDKL3-201ENST00000265334 EPC2Q52LR7 807 aa12.93□□□□□ -0.34
CDKL3-201ENST00000265334 PHLDB3Q6NSJ2 640 aa12.93□□□□□ -0.34
CDKL3-201ENST00000265334 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.93□□□□□ -0.34
CDKL3-201ENST00000265334 VPS36Q86VN1 386 aa12.93□□□□□ -0.34
CDKL3-201ENST00000265334 LRRC57Q8N9N7 239 aa12.93□□□□□ -0.34
CDKL3-201ENST00000265334 DNERQ8NFT8 737 aa12.93□□□□□ -0.34
CDKL3-201ENST00000265334 PLEKHO2Q8TD55 490 aa12.93□□□□□ -0.34
CDKL3-201ENST00000265334 SPIRE2Q8WWL2 714 aa12.93□□□□□ -0.34
CDKL3-201ENST00000265334 RUBCNQ92622 972 aa12.93□□□□□ -0.34
CDKL3-201ENST00000265334 CDHR1Q96JP9 859 aa12.93□□□□□ -0.34
CDKL3-201ENST00000265334 SPATC1LQ9H0A9 340 aa12.93□□□□□ -0.34
CDKL3-201ENST00000265334 PCIF1Q9H4Z3 704 aa12.93□□□□□ -0.34
CDKL3-201ENST00000265334 SUGCTQ9HAC7 445 aa12.93□□□□□ -0.34
CDKL3-201ENST00000265334 TCEAL9Q9UHQ7 104 aa12.93□□□□□ -0.34
CDKL3-201ENST00000265334 N4BP1O75113 896 aaKnown RBP12.92□□□□□ -0.34
CDKL3-201ENST00000265334 NPTX2P47972 431 aa12.92□□□□□ -0.34
CDKL3-201ENST00000265334 NAP1L1P55209 391 aaKnown RBP12.92□□□□□ -0.34
CDKL3-201ENST00000265334 FAM193AP78312 1265 aa12.92□□□□□ -0.34
CDKL3-201ENST00000265334 PPP3CAQ08209 521 aa12.92□□□□□ -0.34
CDKL3-201ENST00000265334 MAP1SQ66K74 1059 aaPredicted RBP12.92□□□□□ -0.34
CDKL3-201ENST00000265334 FMNL3Q8IVF7 1028 aa12.92□□□□□ -0.34
CDKL3-201ENST00000265334 MAP4K3Q8IVH8 894 aa12.92□□□□□ -0.34
CDKL3-201ENST00000265334 RDH13Q8NBN7 331 aa12.92□□□□□ -0.34
CDKL3-201ENST00000265334 ZSWIM2Q8NEG5 633 aa12.92□□□□□ -0.34
CDKL3-201ENST00000265334 LNX1Q8TBB1 728 aaPredicted RBP12.92□□□□□ -0.34
CDKL3-201ENST00000265334 CCDC43Q96MW1 224 aaKnown RBP12.92□□□□□ -0.34
CDKL3-201ENST00000265334 C17orf75Q9HAS0 396 aa12.92□□□□□ -0.34
CDKL3-201ENST00000265334 TBX20Q9UMR3 447 aa12.92□□□□□ -0.34
CDKL3-201ENST00000265334 EMSYQ7Z589 1322 aa12.92□□□□□ -0.34
CDKL3-201ENST00000265334 CES2O00748 559 aa12.92□□□□□ -0.34
CDKL3-201ENST00000265334 DKC1O60832 514 aaKnown RBP eCLIP12.92□□□□□ -0.34
CDKL3-201ENST00000265334 FTCDO95954 541 aa12.92□□□□□ -0.34
CDKL3-201ENST00000265334 H2AFZP0C0S5 128 aa12.92□□□□□ -0.34
CDKL3-201ENST00000265334 ZBTB48P10074 688 aaPredicted RBP12.92□□□□□ -0.34
CDKL3-201ENST00000265334 ADSSP30520 456 aa12.92□□□□□ -0.34
CDKL3-201ENST00000265334 COPB2P35606 906 aa12.92□□□□□ -0.34
CDKL3-201ENST00000265334 GJA5P36382 358 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms