RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 K7ENM7 598 aa12.12□□□□□ -0.47
MSH3-201ENST00000265081 ATG7O95352 703 aa12.12□□□□□ -0.47
MSH3-201ENST00000265081 H2AFZP0C0S5 128 aa12.12□□□□□ -0.47
MSH3-201ENST00000265081 DSG3P32926 999 aa12.12□□□□□ -0.47
MSH3-201ENST00000265081 GALCP54803 685 aa12.12□□□□□ -0.47
MSH3-201ENST00000265081 MTMR2Q13614 643 aa12.12□□□□□ -0.47
MSH3-201ENST00000265081 H2AFVQ71UI9 128 aa12.12□□□□□ -0.47
MSH3-201ENST00000265081 ZNF771Q7L3S4 317 aaPredicted RBP12.12□□□□□ -0.47
MSH3-201ENST00000265081 VPS36Q86VN1 386 aa12.12□□□□□ -0.47
MSH3-201ENST00000265081 FAM71AQ8IYT1 594 aa12.12□□□□□ -0.47
MSH3-201ENST00000265081 LMBR1Q8WVP7 490 aa12.12□□□□□ -0.47
MSH3-201ENST00000265081 WNK4Q96J92 1243 aa12.12□□□□□ -0.47
MSH3-201ENST00000265081 TRERF1Q96PN7 1200 aa12.12□□□□□ -0.47
MSH3-201ENST00000265081 CEP89Q96ST8 783 aa12.12□□□□□ -0.47
MSH3-201ENST00000265081 MOV10L1Q9BXT6 1211 aaKnown RBP12.12□□□□□ -0.47
MSH3-201ENST00000265081 POLD4Q9HCU8 107 aa12.12□□□□□ -0.47
MSH3-201ENST00000265081 HSPBP1Q9NZL4 362 aa12.12□□□□□ -0.47
MSH3-201ENST00000265081 PPP2R3BQ9Y5P8 575 aa12.12□□□□□ -0.47
MSH3-201ENST00000265081 POLR3GO15318 223 aaPredicted RBP12.12□□□□□ -0.47
MSH3-201ENST00000265081 CCDC172P0C7W6 258 aa12.12□□□□□ -0.47
MSH3-201ENST00000265081 PTPRAP18433 802 aa12.12□□□□□ -0.47
MSH3-201ENST00000265081 VAMP7P51809 220 aa12.12□□□□□ -0.47
MSH3-201ENST00000265081 DGKZQ13574 1117 aa12.12□□□□□ -0.47
MSH3-201ENST00000265081 C8orf74Q6P047 294 aa12.12□□□□□ -0.47
MSH3-201ENST00000265081 SLC39A4Q6P5W5 647 aa12.12□□□□□ -0.47
MSH3-201ENST00000265081 C15orf39Q6ZRI6 1047 aa12.12□□□□□ -0.47
MSH3-201ENST00000265081 IQCKQ8N0W5 287 aa12.12□□□□□ -0.47
MSH3-201ENST00000265081 TMC2Q8TDI7 906 aa12.12□□□□□ -0.47
MSH3-201ENST00000265081 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.12□□□□□ -0.479e-12■■□□□ 13.6
MSH3-201ENST00000265081 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.12□□□□□ -0.47
MSH3-201ENST00000265081 HACL1Q9UJ83 578 aa12.12□□□□□ -0.47
MSH3-201ENST00000265081 STYXL1Q9Y6J8 313 aa12.12□□□□□ -0.47
MSH3-201ENST00000265081 RNF40O75150 1001 aa12.11□□□□□ -0.47
MSH3-201ENST00000265081 GPC3P51654 580 aa12.11□□□□□ -0.47
MSH3-201ENST00000265081 DCAF12L1Q5VU92 463 aa12.11□□□□□ -0.47
MSH3-201ENST00000265081 GSPT2Q8IYD1 628 aaKnown RBP12.11□□□□□ -0.47
MSH3-201ENST00000265081 ICAM3P32942 547 aa12.11□□□□□ -0.47
MSH3-201ENST00000265081 GGCXP38435 758 aa12.11□□□□□ -0.47
MSH3-201ENST00000265081 BAG6P46379 1132 aa12.11□□□□□ -0.47
MSH3-201ENST00000265081 RPS6KA1Q15418 735 aa12.11□□□□□ -0.47
MSH3-201ENST00000265081 RNF207Q6ZRF8 634 aa12.11□□□□□ -0.47
MSH3-201ENST00000265081 HAUS6Q7Z4H7 955 aa12.11□□□□□ -0.47
MSH3-201ENST00000265081 IFT20Q8IY31 132 aa12.11□□□□□ -0.47
MSH3-201ENST00000265081 METTL13Q8N6R0 699 aa12.11□□□□□ -0.47
MSH3-201ENST00000265081 XXYLT1Q8NBI6 393 aa12.11□□□□□ -0.47
MSH3-201ENST00000265081 ANKRD62A6NC57 917 aa12.11□□□□□ -0.47
MSH3-201ENST00000265081 CCDC188H7C350 402 aa12.11□□□□□ -0.47
MSH3-201ENST00000265081 ZBED4O75132 1171 aa12.11□□□□□ -0.47
MSH3-201ENST00000265081 TRIM49P0CI25 452 aa12.11□□□□□ -0.47
MSH3-201ENST00000265081 TRIM49CP0CI26 452 aa12.11□□□□□ -0.47
MSH3-201ENST00000265081 CCND2P30279 289 aa12.11□□□□□ -0.47
MSH3-201ENST00000265081 ABCD1P33897 745 aa12.11□□□□□ -0.47
MSH3-201ENST00000265081 HSPA9P38646 679 aaKnown RBP12.11□□□□□ -0.47
MSH3-201ENST00000265081 PLS1Q14651 629 aa12.11□□□□□ -0.47
MSH3-201ENST00000265081 CCDC181Q5TID7 509 aa12.11□□□□□ -0.47
MSH3-201ENST00000265081 ARHGEF19Q8IW93 802 aa12.11□□□□□ -0.47
MSH3-201ENST00000265081 TSEN2Q8NCE0 465 aaKnown RBP12.11□□□□□ -0.47
MSH3-201ENST00000265081 CASKIN2Q8WXE0 1202 aa12.11□□□□□ -0.47
MSH3-201ENST00000265081 CBWD1Q9BRT8 395 aa12.11□□□□□ -0.47
MSH3-201ENST00000265081 TBX20Q9UMR3 447 aa12.11□□□□□ -0.47
MSH3-201ENST00000265081 RIPK3Q9Y572 518 aa12.11□□□□□ -0.47
MSH3-201ENST00000265081 C19orf81C9J6K1 198 aa12.11□□□□□ -0.47
MSH3-201ENST00000265081 ADRB2P07550 413 aa12.11□□□□□ -0.47
MSH3-201ENST00000265081 CHRNB2P17787 502 aa12.11□□□□□ -0.47
MSH3-201ENST00000265081 CYP2J2P51589 502 aa12.11□□□□□ -0.47
MSH3-201ENST00000265081 CD101Q93033 1021 aa12.11□□□□□ -0.47
MSH3-201ENST00000265081 AGPAT1Q99943 283 aa12.11□□□□□ -0.47
MSH3-201ENST00000265081 EMSYQ7Z589 1322 aa12.1□□□□□ -0.47
MSH3-201ENST00000265081 IGKV6D-21A0A0A0MT36 114 aa12.1□□□□□ -0.47
MSH3-201ENST00000265081 ZMYND10O75800 440 aa12.1□□□□□ -0.47
MSH3-201ENST00000265081 ARID5AQ03989 594 aa12.1□□□□□ -0.47
MSH3-201ENST00000265081 SPDYCQ5MJ68 293 aa12.1□□□□□ -0.47
MSH3-201ENST00000265081 WHAMMQ8TF30 809 aa12.1□□□□□ -0.47
MSH3-201ENST00000265081 SHC3Q92529 594 aa12.1□□□□□ -0.47
MSH3-201ENST00000265081 TMEM117Q9H0C3 514 aa12.1□□□□□ -0.47
MSH3-201ENST00000265081 SLITRK6Q9H5Y7 841 aa12.1□□□□□ -0.47
MSH3-201ENST00000265081 COG5Q9UP83 839 aa12.1□□□□□ -0.47
MSH3-201ENST00000265081 ANK1P16157 1881 aa12.1□□□□□ -0.47
MSH3-201ENST00000265081 SPATA31C2B4DYI2 1134 aa12.1□□□□□ -0.47
MSH3-201ENST00000265081 PIGRP01833 764 aa12.1□□□□□ -0.47
MSH3-201ENST00000265081 GZMAP12544 262 aa12.1□□□□□ -0.47
MSH3-201ENST00000265081 ALAS1P13196 640 aa12.1□□□□□ -0.47
MSH3-201ENST00000265081 TCERG1LQ5VWI1 586 aa12.1□□□□□ -0.47
MSH3-201ENST00000265081 ABHD15Q6UXT9 468 aa12.1□□□□□ -0.47
MSH3-201ENST00000265081 CATSPERGQ6ZRH7 1159 aa12.1□□□□□ -0.47
MSH3-201ENST00000265081 GPIHBP1Q8IV16 184 aa12.1□□□□□ -0.47
MSH3-201ENST00000265081 ZNF280CQ8ND82 737 aa12.1□□□□□ -0.47
MSH3-201ENST00000265081 ZSWIM2Q8NEG5 633 aa12.1□□□□□ -0.47
MSH3-201ENST00000265081 KIFAP3Q92845 792 aa12.1□□□□□ -0.47
MSH3-201ENST00000265081 RMDN3Q96TC7 470 aa12.1□□□□□ -0.47
MSH3-201ENST00000265081 AS3MTQ9HBK9 375 aa12.1□□□□□ -0.47
MSH3-201ENST00000265081 VPS18Q9P253 973 aa12.1□□□□□ -0.47
MSH3-201ENST00000265081 PACSIN2Q9UNF0 486 aaPredicted RBP12.1□□□□□ -0.47
MSH3-201ENST00000265081 MYH9P35579 1960 aaKnown RBP12.1□□□□□ -0.47
MSH3-201ENST00000265081 GOLGA8KD6RF30 607 aa12.1□□□□□ -0.47
MSH3-201ENST00000265081 FOXN3O00409 490 aaPredicted RBP12.1□□□□□ -0.47
MSH3-201ENST00000265081 RAD51CO43502 376 aa12.1□□□□□ -0.47
MSH3-201ENST00000265081 DCAF15Q66K64 600 aa12.1□□□□□ -0.47
MSH3-201ENST00000265081 TAS1R3Q7RTX0 852 aa12.1□□□□□ -0.47
MSH3-201ENST00000265081 MICALL2Q8IY33 904 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms