RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 ADAMTS2O95450 1211 aa17.44■□□□□ 0.38
GPC1-201ENST00000264039 POTEIP0CG38 1075 aa17.44■□□□□ 0.38
GPC1-201ENST00000264039 SERPINB6P35237 376 aa17.44■□□□□ 0.38
GPC1-201ENST00000264039 KRT17Q04695 432 aa17.44■□□□□ 0.38
GPC1-201ENST00000264039 ICA1Q05084 483 aa17.44■□□□□ 0.38
GPC1-201ENST00000264039 POTEGQ6S5H5 508 aa17.44■□□□□ 0.38
GPC1-201ENST00000264039 POTEEQ6S8J3 1075 aa17.44■□□□□ 0.38
GPC1-201ENST00000264039 KCNK18Q7Z418 384 aa17.44■□□□□ 0.38
GPC1-201ENST00000264039 PCIF1Q9H4Z3 704 aa17.44■□□□□ 0.38
GPC1-201ENST00000264039 ZBTB21Q9ULJ3 1066 aa17.44■□□□□ 0.38
GPC1-201ENST00000264039 MYO5BQ9ULV0 1848 aa17.44■□□□□ 0.38
GPC1-201ENST00000264039 AFF2P51816 1311 aa17.44■□□□□ 0.38
GPC1-201ENST00000264039 TRPA1O75762 1119 aa17.44■□□□□ 0.38
GPC1-201ENST00000264039 DCTN3O75935 186 aa17.44■□□□□ 0.38
GPC1-201ENST00000264039 ATF7P17544 494 aaPredicted RBP17.44■□□□□ 0.38
GPC1-201ENST00000264039 BTKQ06187 659 aa17.44■□□□□ 0.38
GPC1-201ENST00000264039 THOC5Q13769 683 aaKnown RBP17.44■□□□□ 0.38
GPC1-201ENST00000264039 SPARCL1Q14515 664 aa17.44■□□□□ 0.38
GPC1-201ENST00000264039 C10orf76Q5T2E6 689 aa17.44■□□□□ 0.38
GPC1-201ENST00000264039 SFR1Q86XK3 245 aa17.44■□□□□ 0.38
GPC1-201ENST00000264039 ZSCAN29Q8IWY8 852 aaPredicted RBP17.44■□□□□ 0.38
GPC1-201ENST00000264039 SH3RF3Q8TEJ3 882 aaPredicted RBP17.44■□□□□ 0.38
GPC1-201ENST00000264039 TBC1D10AQ9BXI6 508 aa17.44■□□□□ 0.38
GPC1-201ENST00000264039 MYH6P13533 1939 aa17.44■□□□□ 0.38
GPC1-201ENST00000264039 H0YGN5 161 aa17.44■□□□□ 0.38
GPC1-201ENST00000264039 MARK3P27448 753 aa17.44■□□□□ 0.38
GPC1-201ENST00000264039 GRB10Q13322 594 aa17.44■□□□□ 0.38
GPC1-201ENST00000264039 AUHQ13825 339 aaKnown RBP17.44■□□□□ 0.38
GPC1-201ENST00000264039 NBPF5PQ86XG9 351 aaPredicted RBP17.44■□□□□ 0.38
GPC1-201ENST00000264039 TRIM59Q8IWR1 403 aa17.44■□□□□ 0.38
GPC1-201ENST00000264039 SCG3Q8WXD2 468 aaKnown RBP17.44■□□□□ 0.38
GPC1-201ENST00000264039 RFFLQ8WZ73 363 aa17.44■□□□□ 0.38
GPC1-201ENST00000264039 HAUS1Q96CS2 278 aa17.44■□□□□ 0.38
GPC1-201ENST00000264039 EPAS1Q99814 870 aa17.44■□□□□ 0.38
GPC1-201ENST00000264039 PAGR1Q9BTK6 254 aa17.44■□□□□ 0.38
GPC1-201ENST00000264039 ZNF287Q9HBT7 754 aa17.44■□□□□ 0.38
GPC1-201ENST00000264039 SAYSD1Q9NPB0 183 aa17.44■□□□□ 0.38
GPC1-201ENST00000264039 UBE2TQ9NPD8 197 aaPredicted RBP17.44■□□□□ 0.38
GPC1-201ENST00000264039 DCP1AQ9NPI6 582 aaPredicted RBP17.44■□□□□ 0.38
GPC1-201ENST00000264039 NFS1Q9Y697 457 aa17.44■□□□□ 0.38
GPC1-201ENST00000264039 PREX1Q8TCU6 1659 aa17.43■□□□□ 0.38
GPC1-201ENST00000264039 G3V3G9 751 aa17.43■□□□□ 0.38
GPC1-201ENST00000264039 KITP10721 976 aa17.43■□□□□ 0.38
GPC1-201ENST00000264039 KDSRQ06136 332 aa17.43■□□□□ 0.38
GPC1-201ENST00000264039 DYNC1I2Q13409 638 aaKnown RBP17.43■□□□□ 0.38
GPC1-201ENST00000264039 TAF1BQ53T94 588 aaPredicted RBP17.43■□□□□ 0.38
GPC1-201ENST00000264039 DCAF8Q5TAQ9 597 aa17.43■□□□□ 0.38
GPC1-201ENST00000264039 MTDHQ86UE4 582 aaKnown RBP17.43■□□□□ 0.38
GPC1-201ENST00000264039 COL23A1Q86Y22 540 aaPredicted RBP17.43■□□□□ 0.38
GPC1-201ENST00000264039 FAM186BQ8IYM0 893 aa17.43■□□□□ 0.38
GPC1-201ENST00000264039 AGGF1Q8N302 714 aaeCLIP17.43■□□□□ 0.38
GPC1-201ENST00000264039 ZNF653Q96CK0 615 aa17.43■□□□□ 0.38
GPC1-201ENST00000264039 L3MBTL3Q96JM7 780 aaPredicted RBP17.43■□□□□ 0.38
GPC1-201ENST00000264039 EYA3Q99504 573 aa17.43■□□□□ 0.38
GPC1-201ENST00000264039 PHTF1Q9UMS5 762 aa17.43■□□□□ 0.38
GPC1-201ENST00000264039 SLC12A4Q9UP95 1085 aa17.43■□□□□ 0.38
GPC1-201ENST00000264039 SERPINB3P29508 390 aa17.43■□□□□ 0.38
GPC1-201ENST00000264039 MMP13P45452 471 aa17.43■□□□□ 0.38
GPC1-201ENST00000264039 RIPK1Q13546 671 aa17.43■□□□□ 0.38
GPC1-201ENST00000264039 RNF207Q6ZRF8 634 aa17.43■□□□□ 0.38
GPC1-201ENST00000264039 MIGA2Q7L4E1 593 aa17.43■□□□□ 0.38
GPC1-201ENST00000264039 RNF168Q8IYW5 571 aaPredicted RBP17.43■□□□□ 0.38
GPC1-201ENST00000264039 SYT2Q8N9I0 419 aaPredicted RBP17.43■□□□□ 0.38
GPC1-201ENST00000264039 ZNF317Q96PQ6 595 aaPredicted RBP17.43■□□□□ 0.38
GPC1-201ENST00000264039 EDEM3Q9BZQ6 932 aa17.43■□□□□ 0.38
GPC1-201ENST00000264039 ZNF148Q9UQR1 794 aa17.43■□□□□ 0.38
GPC1-201ENST00000264039 C5orf60A6NFR6 353 aa17.43■□□□□ 0.38
GPC1-201ENST00000264039 FAM187AA6NFU0 413 aa17.43■□□□□ 0.38
GPC1-201ENST00000264039 ATP2A1O14983 1001 aa17.43■□□□□ 0.38
GPC1-201ENST00000264039 RIPK2O43353 540 aa17.43■□□□□ 0.38
GPC1-201ENST00000264039 ABL2P42684 1182 aa17.43■□□□□ 0.38
GPC1-201ENST00000264039 ANO7Q6IWH7 933 aa17.43■□□□□ 0.38
GPC1-201ENST00000264039 TRIM74Q86UV6 250 aa17.43■□□□□ 0.38
GPC1-201ENST00000264039 TRIM73Q86UV7 250 aa17.43■□□□□ 0.38
GPC1-201ENST00000264039 ERMNQ8TAM6 284 aa17.43■□□□□ 0.38
GPC1-201ENST00000264039 KIFAP3Q92845 792 aa17.43■□□□□ 0.38
GPC1-201ENST00000264039 TTC17Q96AE7 1141 aa17.43■□□□□ 0.38
GPC1-201ENST00000264039 CCDC127Q96BQ5 260 aa17.43■□□□□ 0.38
GPC1-201ENST00000264039 HAUS5O94927 633 aa17.42■□□□□ 0.38
GPC1-201ENST00000264039 BAG3O95817 575 aa17.42■□□□□ 0.38
GPC1-201ENST00000264039 CHRNA3P32297 505 aa17.42■□□□□ 0.38
GPC1-201ENST00000264039 VHLP40337 213 aa17.42■□□□□ 0.38
GPC1-201ENST00000264039 MARCKSL1P49006 195 aa17.42■□□□□ 0.38
GPC1-201ENST00000264039 CASP4P49662 377 aa17.42■□□□□ 0.38
GPC1-201ENST00000264039 EPHB1P54762 984 aa17.42■□□□□ 0.38
GPC1-201ENST00000264039 GRAMD1BQ3KR37 738 aa17.42■□□□□ 0.38
GPC1-201ENST00000264039 UBAP2Q5T6F2 1119 aaKnown RBP17.42■□□□□ 0.38
GPC1-201ENST00000264039 CCDC174Q6PII3 467 aa17.42■□□□□ 0.38
GPC1-201ENST00000264039 TPH2Q8IWU9 490 aa17.42■□□□□ 0.38
GPC1-201ENST00000264039 GSDMBQ8TAX9 411 aa17.42■□□□□ 0.38
GPC1-201ENST00000264039 BARHL2Q9NY43 387 aa17.42■□□□□ 0.38
GPC1-201ENST00000264039 SUCLA2Q9P2R7 463 aaPredicted RBP17.42■□□□□ 0.38
GPC1-201ENST00000264039 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.42■□□□□ 0.38
GPC1-201ENST00000264039 GSTT1P30711 240 aa17.42■□□□□ 0.38
GPC1-201ENST00000264039 HNRNPH3P31942 346 aaKnown RBP17.42■□□□□ 0.38
GPC1-201ENST00000264039 MECOMQ03112 1051 aa17.42■□□□□ 0.38
GPC1-201ENST00000264039 SLC25A41Q8N5S1 370 aa17.42■□□□□ 0.38
GPC1-201ENST00000264039 KRT35Q92764 455 aa17.42■□□□□ 0.38
GPC1-201ENST00000264039 TMEM47Q9BQJ4 181 aa17.42■□□□□ 0.38
GPC1-201ENST00000264039 PTPRUQ92729 1446 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms