RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 MTUS1Q9ULD2 1270 aa8.98□□□□□ -0.97
LDB3-201ENST00000263066 LRCH1Q9Y2L9 728 aa8.98□□□□□ -0.97
LDB3-201ENST00000263066 UBE2Q2LH0YL09 131 aa8.98□□□□□ -0.97
LDB3-201ENST00000263066 SPTLC1O15269 473 aa8.98□□□□□ -0.97
LDB3-201ENST00000263066 CALM1P0DP23 149 aa8.98□□□□□ -0.97
LDB3-201ENST00000263066 CALM2P0DP24 149 aa8.98□□□□□ -0.97
LDB3-201ENST00000263066 CALM3P0DP25 149 aa8.98□□□□□ -0.97
LDB3-201ENST00000263066 KRT13P13646 458 aa8.98□□□□□ -0.97
LDB3-201ENST00000263066 VHLP40337 213 aa8.98□□□□□ -0.97
LDB3-201ENST00000263066 EIF2B2P49770 351 aaKnown RBP8.98□□□□□ -0.97
LDB3-201ENST00000263066 CASP7P55210 303 aa8.98□□□□□ -0.97
LDB3-201ENST00000263066 PDE1BQ01064 536 aa8.98□□□□□ -0.97
LDB3-201ENST00000263066 CDC37Q16543 378 aaPredicted RBP8.98□□□□□ -0.97
LDB3-201ENST00000263066 PALB2Q86YC2 1186 aa8.98□□□□□ -0.97
LDB3-201ENST00000263066 RIBC1Q8N443 379 aaPredicted RBP8.98□□□□□ -0.97
LDB3-201ENST00000263066 NSUN7Q8NE18 718 aaKnown RBP8.98□□□□□ -0.97
LDB3-201ENST00000263066 AIFM3Q96NN9 605 aa8.98□□□□□ -0.97
LDB3-201ENST00000263066 LLPHQ9BRT6 129 aaKnown RBP8.98□□□□□ -0.97
LDB3-201ENST00000263066 CNGB3Q9NQW8 809 aa8.98□□□□□ -0.97
LDB3-201ENST00000263066 ZSWIM5Q9P217 1185 aa8.98□□□□□ -0.97
LDB3-201ENST00000263066 USP15Q9Y4E8 981 aaPredicted RBP8.98□□□□□ -0.97
LDB3-201ENST00000263066 NUP188Q5SRE5 1749 aa8.97□□□□□ -0.97
LDB3-201ENST00000263066 NPHP3-ACAD11A0A0J9YXS1 232 aa8.97□□□□□ -0.97
LDB3-201ENST00000263066 A6NHS1 94 aa8.97□□□□□ -0.97
LDB3-201ENST00000263066 TCP11X1B4DZS4 312 aa8.97□□□□□ -0.97
LDB3-201ENST00000263066 KCNK3O14649 394 aa8.97□□□□□ -0.97
LDB3-201ENST00000263066 WDR46O15213 610 aaKnown RBP8.97□□□□□ -0.97
LDB3-201ENST00000263066 CHMP2AO43633 222 aa8.97□□□□□ -0.97
LDB3-201ENST00000263066 TRPA1O75762 1119 aa8.97□□□□□ -0.97
LDB3-201ENST00000263066 FTCDO95954 541 aa8.97□□□□□ -0.97
LDB3-201ENST00000263066 POTEIP0CG38 1075 aa8.97□□□□□ -0.97
LDB3-201ENST00000263066 PTDSS1P48651 473 aaKnown RBP8.97□□□□□ -0.97
LDB3-201ENST00000263066 ST3GAL1Q11201 340 aa8.97□□□□□ -0.97
LDB3-201ENST00000263066 TNFAIP1Q13829 316 aa8.97□□□□□ -0.97
LDB3-201ENST00000263066 TOB2Q14106 344 aaPredicted RBP8.97□□□□□ -0.97
LDB3-201ENST00000263066 SPIRE2Q8WWL2 714 aa8.97□□□□□ -0.97
LDB3-201ENST00000263066 FERMT2Q96AC1 680 aa8.97□□□□□ -0.97
LDB3-201ENST00000263066 STRBPQ96SI9 672 aaKnown RBP8.97□□□□□ -0.97
LDB3-201ENST00000263066 CCT7Q99832 543 aa8.97□□□□□ -0.97
LDB3-201ENST00000263066 OCEL1Q9H607 264 aa8.97□□□□□ -0.97
LDB3-201ENST00000263066 CARD8Q9Y2G2 431 aa8.97□□□□□ -0.97
LDB3-201ENST00000263066 UTP11Q9Y3A2 253 aaKnown RBP8.97□□□□□ -0.97
LDB3-201ENST00000263066 DUSP10Q9Y6W6 482 aa8.97□□□□□ -0.97
LDB3-201ENST00000263066 ZMYM6O95789 1325 aa8.97□□□□□ -0.97
LDB3-201ENST00000263066 BOLA2-SMG1P6H3BVE0 249 aa8.97□□□□□ -0.97
LDB3-201ENST00000263066 CIB2O75838 187 aa8.97□□□□□ -0.97
LDB3-201ENST00000263066 ITGB3BPQ13352 177 aaPredicted RBP8.97□□□□□ -0.97
LDB3-201ENST00000263066 ISLR2Q6UXK2 745 aa8.97□□□□□ -0.97
LDB3-201ENST00000263066 ADAT2Q7Z6V5 191 aaKnown RBP8.97□□□□□ -0.97
LDB3-201ENST00000263066 DDX42Q86XP3 938 aaKnown RBP eCLIP8.97□□□□□ -0.97
LDB3-201ENST00000263066 PNMA1Q8ND90 353 aa8.97□□□□□ -0.97
LDB3-201ENST00000263066 RASGRP4Q8TDF6 673 aa8.97□□□□□ -0.97
LDB3-201ENST00000263066 ZNF341Q9BYN7 854 aa8.97□□□□□ -0.97
LDB3-201ENST00000263066 GLIS2Q9BZE0 524 aaPredicted RBP8.97□□□□□ -0.97
LDB3-201ENST00000263066 RNPEPL1Q9HAU8 725 aa8.97□□□□□ -0.97
LDB3-201ENST00000263066 PCDH18Q9HCL0 1135 aa8.97□□□□□ -0.97
LDB3-201ENST00000263066 ADAM22Q9P0K1 906 aa8.97□□□□□ -0.97
LDB3-201ENST00000263066 PHF24Q9UPV7 400 aa8.97□□□□□ -0.97
LDB3-201ENST00000263066 PARP4Q9UKK3 1724 aaKnown RBP8.97□□□□□ -0.97
LDB3-201ENST00000263066 TJP1Q07157 1748 aa8.97□□□□□ -0.97
LDB3-201ENST00000263066 CENPFP49454 3210 aa8.97□□□□□ -0.97
LDB3-201ENST00000263066 IQCA1LA6NCM1 817 aa8.97□□□□□ -0.97
LDB3-201ENST00000263066 CCDC169A6NNP5 214 aa8.97□□□□□ -0.97
LDB3-201ENST00000263066 KRT75O95678 551 aa8.97□□□□□ -0.97
LDB3-201ENST00000263066 SHBGP04278 402 aa8.97□□□□□ -0.97
LDB3-201ENST00000263066 CCDC166P0CW27 439 aa8.97□□□□□ -0.97
LDB3-201ENST00000263066 PPP1R2P41236 205 aa8.97□□□□□ -0.97
LDB3-201ENST00000263066 LBRQ14739 615 aaKnown RBP8.97□□□□□ -0.97
LDB3-201ENST00000263066 SNX30Q5VWJ9 437 aa8.97□□□□□ -0.97
LDB3-201ENST00000263066 PPP1R2P3Q6NXS1 205 aa8.97□□□□□ -0.97
LDB3-201ENST00000263066 ADGRA1Q86SQ6 560 aa8.97□□□□□ -0.97
LDB3-201ENST00000263066 RBBP8NLQ8NC74 664 aaPredicted RBP8.97□□□□□ -0.97
LDB3-201ENST00000263066 STK32AQ8WU08 396 aa8.97□□□□□ -0.97
LDB3-201ENST00000263066 NSUN4Q96CB9 384 aaKnown RBP8.97□□□□□ -0.97
LDB3-201ENST00000263066 L3MBTL3Q96JM7 780 aaPredicted RBP8.97□□□□□ -0.97
LDB3-201ENST00000263066 CEP295NLQ96MC4 621 aa8.97□□□□□ -0.97
LDB3-201ENST00000263066 CNNM2Q9H8M5 875 aa8.97□□□□□ -0.97
LDB3-201ENST00000263066 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.97□□□□□ -0.97
LDB3-201ENST00000263066 SNX12Q9UMY4 172 aa8.97□□□□□ -0.97
LDB3-201ENST00000263066 CAPN9O14815 690 aa8.96□□□□□ -0.97
LDB3-201ENST00000263066 ORC4O43929 436 aa8.96□□□□□ -0.97
LDB3-201ENST00000263066 KDM1AO60341 852 aa8.96□□□□□ -0.97
LDB3-201ENST00000263066 CALML3P27482 149 aa8.96□□□□□ -0.97
LDB3-201ENST00000263066 ERVK-24P63145 666 aa8.96□□□□□ -0.97
LDB3-201ENST00000263066 LRP10Q7Z4F1 713 aa8.96□□□□□ -0.97
LDB3-201ENST00000263066 SLC10A4Q96EP9 437 aa8.96□□□□□ -0.97
LDB3-201ENST00000263066 FAM192AQ9GZU8 254 aa8.96□□□□□ -0.97
LDB3-201ENST00000263066 NDST4Q9H3R1 872 aa8.96□□□□□ -0.97
LDB3-201ENST00000263066 ELP3Q9H9T3 547 aa8.96□□□□□ -0.97
LDB3-201ENST00000263066 TCP11L1Q9NUJ3 509 aa8.96□□□□□ -0.97
LDB3-201ENST00000263066 STAP2Q9UGK3 403 aa8.96□□□□□ -0.97
LDB3-201ENST00000263066 GYPCP04921 128 aa8.96□□□□□ -0.98
LDB3-201ENST00000263066 KCNA2P16389 499 aa8.96□□□□□ -0.98
LDB3-201ENST00000263066 HOXD12P35452 270 aa8.96□□□□□ -0.98
LDB3-201ENST00000263066 NECTIN1Q15223 517 aa8.96□□□□□ -0.98
LDB3-201ENST00000263066 CYTH1Q15438 398 aa8.96□□□□□ -0.98
LDB3-201ENST00000263066 KCTD19Q17RG1 926 aaPredicted RBP8.96□□□□□ -0.98
LDB3-201ENST00000263066 SCG3Q8WXD2 468 aaKnown RBP8.96□□□□□ -0.98
LDB3-201ENST00000263066 DCP1AQ9NPI6 582 aaPredicted RBP8.96□□□□□ -0.98
LDB3-201ENST00000263066 INTS13Q9NVM9 706 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms