RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 TMED1Q13445 227 aa16.9■□□□□ 0.3
SHANK3-201ENST00000262795 PCSK7Q16549 785 aa16.9■□□□□ 0.3
SHANK3-201ENST00000262795 MUM1Q2TAK8 710 aa16.9■□□□□ 0.3
SHANK3-201ENST00000262795 APPL2Q8NEU8 664 aa16.9■□□□□ 0.3
SHANK3-201ENST00000262795 DHX35Q9H5Z1 703 aaKnown RBP16.9■□□□□ 0.3
SHANK3-201ENST00000262795 PDE11AQ9HCR9 933 aa16.9■□□□□ 0.3
SHANK3-201ENST00000262795 PLXNC1O60486 1568 aa16.9■□□□□ 0.3
SHANK3-201ENST00000262795 C17orf102A2RUQ5 167 aa16.9■□□□□ 0.3
SHANK3-201ENST00000262795 POTEFA5A3E0 1075 aa16.9■□□□□ 0.3
SHANK3-201ENST00000262795 PFKFB2O60825 505 aa16.9■□□□□ 0.3
SHANK3-201ENST00000262795 POTEIP0CG38 1075 aa16.9■□□□□ 0.3
SHANK3-201ENST00000262795 CYP19A1P11511 503 aaPredicted RBP16.9■□□□□ 0.3
SHANK3-201ENST00000262795 PLS3P13797 630 aa16.9■□□□□ 0.3
SHANK3-201ENST00000262795 BCAR1P56945 870 aa16.9■□□□□ 0.3
SHANK3-201ENST00000262795 TWF1Q12792 350 aa16.9■□□□□ 0.3
SHANK3-201ENST00000262795 MTMR3Q13615 1198 aa16.9■□□□□ 0.3
SHANK3-201ENST00000262795 E2F5Q15329 346 aa16.9■□□□□ 0.3
SHANK3-201ENST00000262795 POTEGQ6S5H5 508 aa16.9■□□□□ 0.3
SHANK3-201ENST00000262795 POTEEQ6S8J3 1075 aa16.9■□□□□ 0.3
SHANK3-201ENST00000262795 RGL4Q8IZJ4 473 aa16.9■□□□□ 0.3
SHANK3-201ENST00000262795 TBC1D16Q8TBP0 767 aa16.9■□□□□ 0.3
SHANK3-201ENST00000262795 LXNQ9BS40 222 aa16.9■□□□□ 0.3
SHANK3-201ENST00000262795 ERBB4Q15303 1308 aa16.9■□□□□ 0.3
SHANK3-201ENST00000262795 ENDOD1O94919 500 aa16.9■□□□□ 0.3
SHANK3-201ENST00000262795 ABCD1P33897 745 aa16.9■□□□□ 0.3
SHANK3-201ENST00000262795 NLRP11P59045 1033 aaKnown RBP16.9■□□□□ 0.3
SHANK3-201ENST00000262795 GTSE1Q9NYZ3 720 aa16.9■□□□□ 0.3
SHANK3-201ENST00000262795 PPFIA2O75334 1257 aa16.89■□□□□ 0.3
SHANK3-201ENST00000262795 GLE1Q53GS7 698 aaKnown RBP16.89■□□□□ 0.3
SHANK3-201ENST00000262795 SART1O43290 800 aaKnown RBP16.89■□□□□ 0.29
SHANK3-201ENST00000262795 PGK2P07205 417 aa16.89■□□□□ 0.29
SHANK3-201ENST00000262795 CCDC38Q502W7 563 aa16.89■□□□□ 0.29
SHANK3-201ENST00000262795 ANKRD13AQ8IZ07 590 aa16.89■□□□□ 0.29
SHANK3-201ENST00000262795 DHX38Q92620 1227 aaKnown RBP16.89■□□□□ 0.29
SHANK3-201ENST00000262795 FAF1Q9UNN5 650 aaPredicted RBP16.89■□□□□ 0.29
SHANK3-201ENST00000262795 TMCC1O94876 653 aa16.89■□□□□ 0.29
SHANK3-201ENST00000262795 MYL4P12829 197 aa16.89■□□□□ 0.29
SHANK3-201ENST00000262795 SLCO1A2P46721 670 aa16.89■□□□□ 0.29
SHANK3-201ENST00000262795 COPB1P53618 953 aaKnown RBP16.89■□□□□ 0.29
SHANK3-201ENST00000262795 CYP4A22Q5TCH4 519 aa16.89■□□□□ 0.29
SHANK3-201ENST00000262795 ANKS3Q6ZW76 656 aa16.89■□□□□ 0.29
SHANK3-201ENST00000262795 TRIM4Q9C037 500 aa16.89■□□□□ 0.29
SHANK3-201ENST00000262795 IFNAR2P48551 515 aa16.89■□□□□ 0.29
SHANK3-201ENST00000262795 CCT5P48643 541 aa16.89■□□□□ 0.29
SHANK3-201ENST00000262795 P2RX5Q93086 422 aa16.89■□□□□ 0.29
SHANK3-201ENST00000262795 DRC3Q9H069 523 aa16.89■□□□□ 0.29
SHANK3-201ENST00000262795 CACNA2D2Q9NY47 1150 aa16.89■□□□□ 0.29
SHANK3-201ENST00000262795 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.89■□□□□ 0.29
SHANK3-201ENST00000262795 SPDYE5A6NIY4 337 aa16.89■□□□□ 0.29
SHANK3-201ENST00000262795 POTECB2RU33 542 aa16.89■□□□□ 0.29
SHANK3-201ENST00000262795 PRKCBP05771 671 aa16.89■□□□□ 0.29
SHANK3-201ENST00000262795 SPDYE7PQ495Y7 208 aa16.89■□□□□ 0.29
SHANK3-201ENST00000262795 BTN2A2Q8WVV5 523 aa16.89■□□□□ 0.29
SHANK3-201ENST00000262795 UNC45AQ9H3U1 944 aa16.89■□□□□ 0.29
SHANK3-201ENST00000262795 RGL1Q9NZL6 768 aa16.89■□□□□ 0.29
SHANK3-201ENST00000262795 E9PMD0 336 aa16.89■□□□□ 0.29
SHANK3-201ENST00000262795 IPO5O00410 1097 aaKnown RBP16.89■□□□□ 0.29
SHANK3-201ENST00000262795 EGFRP00533 1210 aa16.89■□□□□ 0.29
SHANK3-201ENST00000262795 CYP2C9P11712 490 aa16.89■□□□□ 0.29
SHANK3-201ENST00000262795 ATP11CQ8NB49 1132 aa16.89■□□□□ 0.29
SHANK3-201ENST00000262795 OPTNQ96CV9 577 aa16.89■□□□□ 0.29
SHANK3-201ENST00000262795 SPATA31A6Q5VVP1 1343 aa16.89■□□□□ 0.29
SHANK3-201ENST00000262795 AKR1B1P15121 316 aa16.88■□□□□ 0.29
SHANK3-201ENST00000262795 PAPOLAP51003 745 aaKnown RBP16.88■□□□□ 0.29
SHANK3-201ENST00000262795 PRAMEP78395 509 aa16.88■□□□□ 0.29
SHANK3-201ENST00000262795 RASSF3Q86WH2 238 aa16.88■□□□□ 0.29
SHANK3-201ENST00000262795 PCDHA7Q9UN72 937 aa16.88■□□□□ 0.29
SHANK3-201ENST00000262795 RAPGEF5Q92565 580 aa16.88■□□□□ 0.29
SHANK3-201ENST00000262795 ARHGAP25P42331 645 aa16.88■□□□□ 0.29
SHANK3-201ENST00000262795 VPS72Q15906 364 aa16.88■□□□□ 0.29
SHANK3-201ENST00000262795 ADCK5Q3MIX3 580 aa16.88■□□□□ 0.29
SHANK3-201ENST00000262795 FZD1Q9UP38 647 aa16.88■□□□□ 0.29
SHANK3-201ENST00000262795 RRP15Q9Y3B9 282 aaKnown RBP16.88■□□□□ 0.29
SHANK3-201ENST00000262795 SNX9Q9Y5X1 595 aa16.88■□□□□ 0.29
SHANK3-201ENST00000262795 RNF40O75150 1001 aa16.88■□□□□ 0.29
SHANK3-201ENST00000262795 VEGFAP15692 232 aaPredicted RBP16.88■□□□□ 0.29
SHANK3-201ENST00000262795 C10orf120Q5SQS8 335 aa16.88■□□□□ 0.29
SHANK3-201ENST00000262795 TOGARAM2Q6ZUX3 1019 aa16.88■□□□□ 0.29
SHANK3-201ENST00000262795 TMC7Q7Z402 723 aa16.88■□□□□ 0.29
SHANK3-201ENST00000262795 SFR1Q86XK3 245 aa16.88■□□□□ 0.29
SHANK3-201ENST00000262795 TRIM58Q8NG06 486 aa16.88■□□□□ 0.29
SHANK3-201ENST00000262795 SYTL2Q9HCH5 934 aa16.88■□□□□ 0.29
SHANK3-201ENST00000262795 RBAKQ9NYW8 714 aaPredicted RBP16.88■□□□□ 0.29
SHANK3-201ENST00000262795 BIVM-ERCC5R4GMW8 1640 aa16.88■□□□□ 0.29
SHANK3-201ENST00000262795 LAD1O00515 517 aa16.88■□□□□ 0.29
SHANK3-201ENST00000262795 ZRANB2O95218 330 aaKnown RBP eCLIP16.88■□□□□ 0.29
SHANK3-201ENST00000262795 ZFYVE19Q96K21 471 aa16.88■□□□□ 0.29
SHANK3-201ENST00000262795 PPP1R36Q96LQ0 422 aa16.88■□□□□ 0.29
SHANK3-201ENST00000262795 HYOU1Q9Y4L1 999 aa16.88■□□□□ 0.29
SHANK3-201ENST00000262795 PCDHB6Q9Y5E3 794 aa16.88■□□□□ 0.29
SHANK3-201ENST00000262795 NPTXRO95502 500 aa16.88■□□□□ 0.29
SHANK3-201ENST00000262795 KITP10721 976 aa16.88■□□□□ 0.29
SHANK3-201ENST00000262795 KCNB1Q14721 858 aa16.88■□□□□ 0.29
SHANK3-201ENST00000262795 TAGAPQ8N103 731 aa16.88■□□□□ 0.29
SHANK3-201ENST00000262795 MCPH1Q8NEM0 835 aa16.88■□□□□ 0.29
SHANK3-201ENST00000262795 SLC26A7Q8TE54 656 aa16.88■□□□□ 0.29
SHANK3-201ENST00000262795 NEDD4P46934 1319 aa16.87■□□□□ 0.29
SHANK3-201ENST00000262795 NPHP3-ACAD11A0A0J9YXS1 232 aa16.87■□□□□ 0.29
SHANK3-201ENST00000262795 ARIH2O95376 493 aa16.87■□□□□ 0.29
SHANK3-201ENST00000262795 TBC1D22BQ9NU19 505 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms