RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 PIK3R5Q8WYR1 880 aa24.47■■□□□ 1.51
MCF2L-201ENST00000261963 KRT12Q99456 494 aa24.47■■□□□ 1.51
MCF2L-201ENST00000261963 CCPG1Q9ULG6 757 aa24.47■■□□□ 1.51
MCF2L-201ENST00000261963 ARHGEF35A5YM69 484 aa24.47■■□□□ 1.51
MCF2L-201ENST00000261963 KCNK3O14649 394 aa24.47■■□□□ 1.51
MCF2L-201ENST00000261963 HEXIM1O94992 359 aaKnown RBP24.47■■□□□ 1.51
MCF2L-201ENST00000261963 ICAM1P05362 532 aa24.47■■□□□ 1.51
MCF2L-201ENST00000261963 GRIPAP1Q4V328 841 aa24.47■■□□□ 1.51
MCF2L-201ENST00000261963 STXBP4Q6ZWJ1 553 aa24.47■■□□□ 1.51
MCF2L-201ENST00000261963 MTMR14Q8NCE2 650 aa24.47■■□□□ 1.51
MCF2L-201ENST00000261963 SLC30A5Q8TAD4 765 aa24.47■■□□□ 1.51
MCF2L-201ENST00000261963 IFT81Q8WYA0 676 aa24.47■■□□□ 1.51
MCF2L-201ENST00000261963 CYFIP2Q96F07 1278 aa24.47■■□□□ 1.51
MCF2L-201ENST00000261963 GPR88Q9GZN0 384 aa24.47■■□□□ 1.51
MCF2L-201ENST00000261963 PDGFDQ9GZP0 370 aaPredicted RBP24.47■■□□□ 1.51
MCF2L-201ENST00000261963 KCNH7Q9NS40 1196 aa24.47■■□□□ 1.51
MCF2L-201ENST00000261963 PKD2L1Q9P0L9 805 aa24.47■■□□□ 1.51
MCF2L-201ENST00000261963 NFIBO00712 420 aa24.46■■□□□ 1.51
MCF2L-201ENST00000261963 H2AFZP0C0S5 128 aa24.46■■□□□ 1.51
MCF2L-201ENST00000261963 SOX5P35711 763 aa24.46■■□□□ 1.51
MCF2L-201ENST00000261963 MAP3K10Q02779 954 aa24.46■■□□□ 1.51
MCF2L-201ENST00000261963 ITGB3BPQ13352 177 aaPredicted RBP24.46■■□□□ 1.51
MCF2L-201ENST00000261963 CYB5D1Q6P9G0 228 aa24.46■■□□□ 1.51
MCF2L-201ENST00000261963 H2AFVQ71UI9 128 aa24.46■■□□□ 1.51
MCF2L-201ENST00000261963 MAGEC3Q8TD91 643 aa24.46■■□□□ 1.51
MCF2L-201ENST00000261963 CLEC4DQ8WXI8 215 aa24.46■■□□□ 1.51
MCF2L-201ENST00000261963 STK33Q9BYT3 514 aa24.46■■□□□ 1.51
MCF2L-201ENST00000261963 EPB41L5Q9HCM4 733 aa24.46■■□□□ 1.51
MCF2L-201ENST00000261963 DDX20Q9UHI6 824 aaKnown RBP24.46■■□□□ 1.51
MCF2L-201ENST00000261963 ESYT3A0FGR9 886 aa24.46■■□□□ 1.51
MCF2L-201ENST00000261963 DHX15O43143 795 aaKnown RBP24.46■■□□□ 1.51
MCF2L-201ENST00000261963 BCRP11274 1271 aa24.46■■□□□ 1.51
MCF2L-201ENST00000261963 EZRP15311 586 aaKnown RBP24.46■■□□□ 1.51
MCF2L-201ENST00000261963 IFI16Q16666 785 aaKnown RBP24.46■■□□□ 1.51
MCF2L-201ENST00000261963 VPS36Q86VN1 386 aa24.46■■□□□ 1.51
MCF2L-201ENST00000261963 U2AF1L4Q8WU68 220 aaKnown RBP24.46■■□□□ 1.51
MCF2L-201ENST00000261963 TAF4BQ92750 862 aa24.46■■□□□ 1.51
MCF2L-201ENST00000261963 DNAJC12Q9UKB3 198 aa24.46■■□□□ 1.51
MCF2L-201ENST00000261963 FRMD4BQ9Y2L6 1034 aa24.46■■□□□ 1.51
MCF2L-201ENST00000261963 IBSPP21815 317 aaPredicted RBP24.45■■□□□ 1.51
MCF2L-201ENST00000261963 CRYMQ14894 314 aa24.45■■□□□ 1.51
MCF2L-201ENST00000261963 DRAP1Q14919 205 aaPredicted RBP24.45■■□□□ 1.51
MCF2L-201ENST00000261963 PTPROQ16827 1216 aa24.45■■□□□ 1.51
MCF2L-201ENST00000261963 ARFGAP2Q8N6H7 521 aa24.45■■□□□ 1.51
MCF2L-201ENST00000261963 ZBED3Q96IU2 234 aaPredicted RBP24.45■■□□□ 1.51
MCF2L-201ENST00000261963 SYT11Q9BT88 431 aa24.45■■□□□ 1.51
MCF2L-201ENST00000261963 RGPD3A6NKT7 1758 aaPredicted RBP24.45■■□□□ 1.5
MCF2L-201ENST00000261963 RGPD4Q7Z3J3 1758 aa24.45■■□□□ 1.5
MCF2L-201ENST00000261963 A0A0A6YYK5 440 aaPredicted RBP24.45■■□□□ 1.5
MCF2L-201ENST00000261963 ASNSP08243 561 aa24.45■■□□□ 1.5
MCF2L-201ENST00000261963 GUCY2DQ02846 1103 aa24.45■■□□□ 1.5
MCF2L-201ENST00000261963 PPP2R5AQ15172 486 aa24.45■■□□□ 1.5
MCF2L-201ENST00000261963 PADI6Q6TGC4 694 aa24.45■■□□□ 1.5
MCF2L-201ENST00000261963 SLFN11Q7Z7L1 901 aa24.45■■□□□ 1.5
MCF2L-201ENST00000261963 SLC9A9Q8IVB4 645 aa24.45■■□□□ 1.5
MCF2L-201ENST00000261963 FUKQ8N0W3 1084 aa24.45■■□□□ 1.5
MCF2L-201ENST00000261963 NEK9Q8TD19 979 aa24.45■■□□□ 1.5
MCF2L-201ENST00000261963 ZNF341Q9BYN7 854 aa24.45■■□□□ 1.5
MCF2L-201ENST00000261963 INTS2Q9H0H0 1204 aaKnown RBP24.45■■□□□ 1.5
MCF2L-201ENST00000261963 PPANQ9NQ55 473 aaKnown RBP24.45■■□□□ 1.5
MCF2L-201ENST00000261963 STK32BQ9NY57 414 aa24.45■■□□□ 1.5
MCF2L-201ENST00000261963 INTUQ9ULD6 942 aa24.45■■□□□ 1.5
MCF2L-201ENST00000261963 GUCY2FP51841 1108 aa24.44■■□□□ 1.5
MCF2L-201ENST00000261963 MIER3Q7Z3K6 550 aa24.44■■□□□ 1.5
MCF2L-201ENST00000261963 NBPF9Q3BBW0 867 aa24.44■■□□□ 1.5
MCF2L-201ENST00000261963 C3orf20Q8ND61 904 aa24.44■■□□□ 1.5
MCF2L-201ENST00000261963 HOOK2Q96ED9 719 aa24.44■■□□□ 1.5
MCF2L-201ENST00000261963 SGSM3Q96HU1 749 aa24.44■■□□□ 1.5
MCF2L-201ENST00000261963 PBKQ96KB5 322 aa24.44■■□□□ 1.5
MCF2L-201ENST00000261963 SCAF8Q9UPN6 1271 aaKnown RBP24.44■■□□□ 1.5
MCF2L-201ENST00000261963 STXBP5LQ9Y2K9 1186 aa24.44■■□□□ 1.5
MCF2L-201ENST00000261963 RAD51CO43502 376 aa24.43■■□□□ 1.5
MCF2L-201ENST00000261963 KCNA3P22001 575 aa24.43■■□□□ 1.5
MCF2L-201ENST00000261963 PLS1Q14651 629 aa24.43■■□□□ 1.5
MCF2L-201ENST00000261963 AGBL3Q8NEM8 1001 aa24.43■■□□□ 1.5
MCF2L-201ENST00000261963 WHAMMQ8TF30 809 aa24.43■■□□□ 1.5
MCF2L-201ENST00000261963 CASKIN2Q8WXE0 1202 aa24.43■■□□□ 1.5
MCF2L-201ENST00000261963 GOLGA6L10A6NI86 522 aa24.43■■□□□ 1.5
MCF2L-201ENST00000261963 PPP1R12AO14974 1030 aaPredicted RBP24.43■■□□□ 1.5
MCF2L-201ENST00000261963 GALCP54803 685 aa24.43■■□□□ 1.5
MCF2L-201ENST00000261963 EN1Q05925 392 aaPredicted RBP24.43■■□□□ 1.5
MCF2L-201ENST00000261963 BFSP1Q12934 665 aa24.43■■□□□ 1.5
MCF2L-201ENST00000261963 TRADDQ15628 312 aa24.43■■□□□ 1.5
MCF2L-201ENST00000261963 MAEAQ7L5Y9 396 aa24.43■■□□□ 1.5
MCF2L-201ENST00000261963 MAATS1Q7Z4T9 603 aa24.43■■□□□ 1.5
MCF2L-201ENST00000261963 GLYCTKQ8IVS8 523 aa24.43■■□□□ 1.5
MCF2L-201ENST00000261963 ACTRT1Q8TDG2 376 aa24.43■■□□□ 1.5
MCF2L-201ENST00000261963 CAMKK2Q96RR4 588 aa24.43■■□□□ 1.5
MCF2L-201ENST00000261963 ZHX2Q9Y6X8 837 aa24.43■■□□□ 1.5
MCF2L-201ENST00000261963 GMNCA6NCL1 334 aa24.42■■□□□ 1.5
MCF2L-201ENST00000261963 PHF20L1A8MW92 1017 aa24.42■■□□□ 1.5
MCF2L-201ENST00000261963 WNT10BO00744 389 aa24.42■■□□□ 1.5
MCF2L-201ENST00000261963 EXOC3O60645 756 aa24.42■■□□□ 1.5
MCF2L-201ENST00000261963 MYL7Q01449 175 aa24.42■■□□□ 1.5
MCF2L-201ENST00000261963 FAM228AQ86W67 206 aa24.42■■□□□ 1.5
MCF2L-201ENST00000261963 METTL13Q8N6R0 699 aa24.42■■□□□ 1.5
MCF2L-201ENST00000261963 SCFD2Q8WU76 684 aa24.42■■□□□ 1.5
MCF2L-201ENST00000261963 FAXDC2Q96IV6 333 aa24.42■■□□□ 1.5
MCF2L-201ENST00000261963 SCLT1Q96NL6 688 aa24.42■■□□□ 1.5
MCF2L-201ENST00000261963 APEX2Q9UBZ4 518 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms