RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 K7ENM7 598 aa17.72■□□□□ 0.43
TM9SF1-201ENST00000261789 PLSCR1O15162 318 aa17.72■□□□□ 0.43
TM9SF1-201ENST00000261789 USP8P40818 1118 aa17.72■□□□□ 0.43
TM9SF1-201ENST00000261789 GCLMP48507 274 aa17.72■□□□□ 0.43
TM9SF1-201ENST00000261789 MIGA2Q7L4E1 593 aa17.72■□□□□ 0.43
TM9SF1-201ENST00000261789 KRT35Q92764 455 aa17.72■□□□□ 0.43
TM9SF1-201ENST00000261789 CBWD1Q9BRT8 395 aa17.72■□□□□ 0.43
TM9SF1-201ENST00000261789 ATRNL1Q5VV63 1379 aa17.71■□□□□ 0.43
TM9SF1-201ENST00000261789 VIL1P09327 827 aaKnown RBP17.71■□□□□ 0.43
TM9SF1-201ENST00000261789 PPP3CAQ08209 521 aa17.71■□□□□ 0.43
TM9SF1-201ENST00000261789 NFIL3Q16649 462 aa17.71■□□□□ 0.43
TM9SF1-201ENST00000261789 CC2D2BQ6DHV5 1058 aa17.71■□□□□ 0.43
TM9SF1-201ENST00000261789 ELMO3Q96BJ8 720 aa17.71■□□□□ 0.43
TM9SF1-201ENST00000261789 ARHGEF10LQ9HCE6 1279 aa17.71■□□□□ 0.43
TM9SF1-201ENST00000261789 TMX2Q9Y320 296 aa17.71■□□□□ 0.43
TM9SF1-201ENST00000261789 YDJCA8MPS7 323 aa17.71■□□□□ 0.42
TM9SF1-201ENST00000261789 ATMINO43313 823 aaPredicted RBP17.71■□□□□ 0.42
TM9SF1-201ENST00000261789 ENTPD3O75355 529 aa17.71■□□□□ 0.42
TM9SF1-201ENST00000261789 NPM3O75607 178 aaKnown RBP17.71■□□□□ 0.42
TM9SF1-201ENST00000261789 ITGB5P18084 799 aa17.71■□□□□ 0.42
TM9SF1-201ENST00000261789 GRIPAP1Q4V328 841 aa17.71■□□□□ 0.42
TM9SF1-201ENST00000261789 CHADLQ6NUI6 762 aa17.71■□□□□ 0.42
TM9SF1-201ENST00000261789 B4GALNT4Q76KP1 1039 aa17.71■□□□□ 0.42
TM9SF1-201ENST00000261789 AGPAT1Q99943 283 aa17.71■□□□□ 0.42
TM9SF1-201ENST00000261789 SEL1LQ9UBV2 794 aa17.71■□□□□ 0.42
TM9SF1-201ENST00000261789 ALG6Q9Y672 507 aa17.71■□□□□ 0.42
TM9SF1-201ENST00000261789 RBBP6Q7Z6E9 1792 aaKnown RBP17.7■□□□□ 0.42
TM9SF1-201ENST00000261789 CPP00450 1065 aa17.7■□□□□ 0.42
TM9SF1-201ENST00000261789 FTLP02792 175 aaPredicted RBP17.7■□□□□ 0.42
TM9SF1-201ENST00000261789 MAGOHP61326 146 aaKnown RBP17.7■□□□□ 0.42
TM9SF1-201ENST00000261789 DR1Q01658 176 aa17.7■□□□□ 0.42
TM9SF1-201ENST00000261789 PPP2R5AQ15172 486 aa17.7■□□□□ 0.42
TM9SF1-201ENST00000261789 PADI6Q6TGC4 694 aa17.7■□□□□ 0.42
TM9SF1-201ENST00000261789 CPNE8Q86YQ8 564 aa17.7■□□□□ 0.42
TM9SF1-201ENST00000261789 C1orf131Q8NDD1 294 aaKnown RBP17.7■□□□□ 0.42
TM9SF1-201ENST00000261789 SEC14L1Q92503 715 aa17.7■□□□□ 0.42
TM9SF1-201ENST00000261789 MAGOHBQ96A72 148 aaKnown RBP17.7■□□□□ 0.42
TM9SF1-201ENST00000261789 WDR11Q9BZH6 1224 aa17.7■□□□□ 0.42
TM9SF1-201ENST00000261789 GOPCQ9HD26 462 aa17.7■□□□□ 0.42
TM9SF1-201ENST00000261789 SLC12A6Q9UHW9 1150 aa17.7■□□□□ 0.42
TM9SF1-201ENST00000261789 ODF2LQ9ULJ1 636 aa17.7■□□□□ 0.42
TM9SF1-201ENST00000261789 ANKRD62A6NC57 917 aa17.7■□□□□ 0.42
TM9SF1-201ENST00000261789 SHBGP04278 402 aa17.7■□□□□ 0.42
TM9SF1-201ENST00000261789 PTENP60484 403 aa17.7■□□□□ 0.42
TM9SF1-201ENST00000261789 SF3B2Q13435 895 aaKnown RBP17.7■□□□□ 0.42
TM9SF1-201ENST00000261789 LLGL1Q15334 1064 aa17.7■□□□□ 0.42
TM9SF1-201ENST00000261789 KRT71Q3SY84 523 aa17.7■□□□□ 0.42
TM9SF1-201ENST00000261789 UBAP2Q5T6F2 1119 aaKnown RBP17.7■□□□□ 0.42
TM9SF1-201ENST00000261789 IL31RAQ8NI17 732 aa17.7■□□□□ 0.42
TM9SF1-201ENST00000261789 C18orf8Q96DM3 657 aa17.7■□□□□ 0.42
TM9SF1-201ENST00000261789 AGBL1Q96MI9 1066 aa17.7■□□□□ 0.42
TM9SF1-201ENST00000261789 TEKT3Q9BXF9 490 aa17.7■□□□□ 0.42
TM9SF1-201ENST00000261789 CTTNBP2NLQ9P2B4 639 aa17.7■□□□□ 0.42
TM9SF1-201ENST00000261789 SCAF8Q9UPN6 1271 aaKnown RBP17.7■□□□□ 0.42
TM9SF1-201ENST00000261789 SNX24Q9Y343 169 aa17.7■□□□□ 0.42
TM9SF1-201ENST00000261789 MEFVO15553 781 aaPredicted RBP17.69■□□□□ 0.42
TM9SF1-201ENST00000261789 KRT13P13646 458 aa17.69■□□□□ 0.42
TM9SF1-201ENST00000261789 FKBP1AP62942 108 aaKnown RBP17.69■□□□□ 0.42
TM9SF1-201ENST00000261789 IFT88Q13099 833 aa17.69■□□□□ 0.42
TM9SF1-201ENST00000261789 STXBP4Q6ZWJ1 553 aa17.69■□□□□ 0.42
TM9SF1-201ENST00000261789 LDHDQ86WU2 507 aa17.69■□□□□ 0.42
TM9SF1-201ENST00000261789 OTUD6BQ8N6M0 293 aa17.69■□□□□ 0.42
TM9SF1-201ENST00000261789 PLEKHO2Q8TD55 490 aa17.69■□□□□ 0.42
TM9SF1-201ENST00000261789 FMO2Q99518 471 aa17.69■□□□□ 0.42
TM9SF1-201ENST00000261789 STRA6Q9BX79 667 aa17.69■□□□□ 0.42
TM9SF1-201ENST00000261789 RANBP17Q9H2T7 1088 aaKnown RBP17.69■□□□□ 0.42
TM9SF1-201ENST00000261789 CAPN7Q9Y6W3 813 aa17.69■□□□□ 0.42
TM9SF1-201ENST00000261789 ATP8B3O60423 1300 aa17.69■□□□□ 0.42
TM9SF1-201ENST00000261789 FAM107AO95990 144 aa17.69■□□□□ 0.42
TM9SF1-201ENST00000261789 GUCY2CP25092 1073 aa17.69■□□□□ 0.42
TM9SF1-201ENST00000261789 PLTPP55058 493 aa17.69■□□□□ 0.42
TM9SF1-201ENST00000261789 MKRN4PQ13434 485 aaPredicted RBP17.69■□□□□ 0.42
TM9SF1-201ENST00000261789 KIF22Q14807 665 aa17.69■□□□□ 0.42
TM9SF1-201ENST00000261789 QPCTQ16769 361 aa17.69■□□□□ 0.42
TM9SF1-201ENST00000261789 RNF187Q5TA31 235 aaPredicted RBP17.69■□□□□ 0.42
TM9SF1-201ENST00000261789 RPUSD2Q8IZ73 545 aaKnown RBP17.69■□□□□ 0.42
TM9SF1-201ENST00000261789 ZDHHC14Q8IZN3 488 aa17.69■□□□□ 0.42
TM9SF1-201ENST00000261789 MDM1Q8TC05 714 aa17.69■□□□□ 0.42
TM9SF1-201ENST00000261789 BTBD6Q96KE9 485 aa17.69■□□□□ 0.42
TM9SF1-201ENST00000261789 COL20A1Q9P218 1284 aa17.69■□□□□ 0.42
TM9SF1-201ENST00000261789 TTC7AQ9ULT0 858 aaPredicted RBP17.69■□□□□ 0.42
TM9SF1-201ENST00000261789 GOLGA8IPA6NC78 632 aa17.68■□□□□ 0.42
TM9SF1-201ENST00000261789 GOLGA8JA6NMD2 632 aa17.68■□□□□ 0.42
TM9SF1-201ENST00000261789 KIAA0754O94854 1291 aa17.68■□□□□ 0.42
TM9SF1-201ENST00000261789 B3GNT9Q6UX72 402 aa17.68■□□□□ 0.42
TM9SF1-201ENST00000261789 RUFY4Q6ZNE9 571 aa17.68■□□□□ 0.42
TM9SF1-201ENST00000261789 AKT1S1Q96B36 256 aa17.68■□□□□ 0.42
TM9SF1-201ENST00000261789 CARD9Q9H257 536 aa17.68■□□□□ 0.42
TM9SF1-201ENST00000261789 GPRC5CQ9NQ84 441 aa17.68■□□□□ 0.42
TM9SF1-201ENST00000261789 FAM114A2Q9NRY5 505 aa17.68■□□□□ 0.42
TM9SF1-201ENST00000261789 TNS1Q9HBL0 1735 aaKnown RBP17.68■□□□□ 0.42
TM9SF1-201ENST00000261789 H0YIN7 160 aa17.67■□□□□ 0.42
TM9SF1-201ENST00000261789 SGPL1O95470 568 aa17.67■□□□□ 0.42
TM9SF1-201ENST00000261789 VCAM1P19320 739 aa17.67■□□□□ 0.42
TM9SF1-201ENST00000261789 VAMP7P51809 220 aa17.67■□□□□ 0.42
TM9SF1-201ENST00000261789 IFFO1Q0D2I5 559 aa17.67■□□□□ 0.42
TM9SF1-201ENST00000261789 MTMR3Q13615 1198 aa17.67■□□□□ 0.42
TM9SF1-201ENST00000261789 MESDQ14696 234 aa17.67■□□□□ 0.42
TM9SF1-201ENST00000261789 C1orf220Q5T0J3 134 aa17.67■□□□□ 0.42
TM9SF1-201ENST00000261789 DUPD1Q68J44 220 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms