RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 MARCOQ9UEW3 520 aaPredicted RBP10.86□□□□□ -0.67
PALB2-201ENST00000261584 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.86□□□□□ -0.67
PALB2-201ENST00000261584 E2F8A0AVK6 867 aa10.86□□□□□ -0.67
PALB2-201ENST00000261584 ZBTB5O15062 677 aa10.86□□□□□ -0.67
PALB2-201ENST00000261584 GJB6O95452 261 aa10.86□□□□□ -0.67
PALB2-201ENST00000261584 MXI1P50539 228 aa10.86□□□□□ -0.67
PALB2-201ENST00000261584 KRT17Q04695 432 aa10.86□□□□□ -0.67
PALB2-201ENST00000261584 SLC20A2Q08357 652 aa10.86□□□□□ -0.67
PALB2-201ENST00000261584 SPRED3Q2MJR0 410 aa10.86□□□□□ -0.67
PALB2-201ENST00000261584 DHX38Q92620 1227 aaKnown RBP10.86□□□□□ -0.67
PALB2-201ENST00000261584 TTC17Q96AE7 1141 aa10.86□□□□□ -0.67
PALB2-201ENST00000261584 SHCBP1LQ9BZQ2 653 aa10.86□□□□□ -0.67
PALB2-201ENST00000261584 C10orf88Q9H8K7 445 aa10.86□□□□□ -0.67
PALB2-201ENST00000261584 SH3GLB2Q9NR46 395 aa10.86□□□□□ -0.67
PALB2-201ENST00000261584 GRIN2DO15399 1336 aa10.85□□□□□ -0.67
PALB2-201ENST00000261584 PDE4DIPQ5VU43 2346 aa10.85□□□□□ -0.67
PALB2-201ENST00000261584 CCDC188H7C350 402 aa10.85□□□□□ -0.67
PALB2-201ENST00000261584 PCP11498 1178 aaKnown RBP10.85□□□□□ -0.67
PALB2-201ENST00000261584 ITGB3BPQ13352 177 aaPredicted RBP10.85□□□□□ -0.67
PALB2-201ENST00000261584 ANKRD20A8PQ5CZ79 823 aa10.85□□□□□ -0.67
PALB2-201ENST00000261584 TMCO4Q5TGY1 634 aa10.85□□□□□ -0.67
PALB2-201ENST00000261584 ZC3H18Q86VM9 953 aaKnown RBP10.85□□□□□ -0.67
PALB2-201ENST00000261584 PALB2Q86YC2 1186 aa10.85□□□□□ -0.67
PALB2-201ENST00000261584 MTMR4Q9NYA4 1195 aa10.85□□□□□ -0.67
PALB2-201ENST00000261584 PCDHAC2Q9Y5I4 1007 aa10.85□□□□□ -0.67
PALB2-201ENST00000261584 BZW2Q9Y6E2 419 aaKnown RBP10.85□□□□□ -0.67
PALB2-201ENST00000261584 SPATA31D1Q6ZQQ2 1576 aa10.85□□□□□ -0.67
PALB2-201ENST00000261584 EME2A4GXA9 379 aaPredicted RBP10.85□□□□□ -0.67
PALB2-201ENST00000261584 PALM3A6NDB9 673 aaPredicted RBP10.85□□□□□ -0.67
PALB2-201ENST00000261584 HNRNPDLO14979 420 aaKnown RBP10.85□□□□□ -0.67
PALB2-201ENST00000261584 PDE6CP51160 858 aa10.85□□□□□ -0.67
PALB2-201ENST00000261584 ASPRV1Q53RT3 343 aa10.85□□□□□ -0.67
PALB2-201ENST00000261584 LMNTD2Q8IXW0 634 aa10.85□□□□□ -0.67
PALB2-201ENST00000261584 IQCKQ8N0W5 287 aa10.85□□□□□ -0.67
PALB2-201ENST00000261584 NEDD1Q8NHV4 660 aa10.85□□□□□ -0.67
PALB2-201ENST00000261584 ARHGEF1Q92888 912 aaKnown RBP10.85□□□□□ -0.67
PALB2-201ENST00000261584 EIF2AK1Q9BQI3 630 aaKnown RBP10.85□□□□□ -0.67
PALB2-201ENST00000261584 ERP44Q9BS26 406 aa10.85□□□□□ -0.67
PALB2-201ENST00000261584 OSBPL7Q9BZF2 842 aa10.85□□□□□ -0.67
PALB2-201ENST00000261584 ZCWPW1Q9H0M4 648 aa10.85□□□□□ -0.67
PALB2-201ENST00000261584 TDRD3Q9H7E2 651 aaKnown RBP10.85□□□□□ -0.67
PALB2-201ENST00000261584 GPRC5CQ9NQ84 441 aa10.85□□□□□ -0.67
PALB2-201ENST00000261584 NOP53Q9NZM5 478 aaKnown RBP10.85□□□□□ -0.67
PALB2-201ENST00000261584 HAO1Q9UJM8 370 aa10.85□□□□□ -0.67
PALB2-201ENST00000261584 DDX3XO00571 662 aaKnown RBP eCLIP10.85□□□□□ -0.672e-9■■■□□ 16.8
PALB2-201ENST00000261584 SOX10P56693 466 aa10.85□□□□□ -0.67
PALB2-201ENST00000261584 RASIP1Q5U651 963 aa10.85□□□□□ -0.67
PALB2-201ENST00000261584 CASC4Q6P4E1 433 aa10.85□□□□□ -0.67
PALB2-201ENST00000261584 ELOA2Q8IYF1 753 aaPredicted RBP10.85□□□□□ -0.67
PALB2-201ENST00000261584 CCDC33Q8N5R6 958 aa10.85□□□□□ -0.67
PALB2-201ENST00000261584 ZNF564Q8TBZ8 553 aaPredicted RBP10.85□□□□□ -0.67
PALB2-201ENST00000261584 MAML1Q92585 1016 aa10.85□□□□□ -0.67
PALB2-201ENST00000261584 LRRC4CQ9HCJ2 640 aa10.85□□□□□ -0.67
PALB2-201ENST00000261584 ERVK-5Q9HDB9 667 aa10.85□□□□□ -0.67
PALB2-201ENST00000261584 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.85□□□□□ -0.67
PALB2-201ENST00000261584 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.85□□□□□ -0.67
PALB2-201ENST00000261584 ABCB11O95342 1321 aa10.85□□□□□ -0.67
PALB2-201ENST00000261584 PLS3P13797 630 aa10.84□□□□□ -0.67
PALB2-201ENST00000261584 GBP1P32455 592 aa10.84□□□□□ -0.67
PALB2-201ENST00000261584 SOX5P35711 763 aa10.84□□□□□ -0.67
PALB2-201ENST00000261584 ATXN3P54252 364 aaPredicted RBP10.84□□□□□ -0.67
PALB2-201ENST00000261584 SLC35G1Q2M3R5 365 aa10.84□□□□□ -0.67
PALB2-201ENST00000261584 NBPF20Q3BBV1 942 aa10.84□□□□□ -0.67
PALB2-201ENST00000261584 SEZ6Q53EL9 994 aa10.84□□□□□ -0.67
PALB2-201ENST00000261584 FBXO33Q7Z6M2 555 aa10.84□□□□□ -0.67
PALB2-201ENST00000261584 LINC00116Q8NCU8 138 aa10.84□□□□□ -0.67
PALB2-201ENST00000261584 TEKT1Q969V4 418 aa10.84□□□□□ -0.67
PALB2-201ENST00000261584 ANAPC4Q9UJX5 808 aa10.84□□□□□ -0.67
PALB2-201ENST00000261584 SLIT1O75093 1534 aa10.84□□□□□ -0.67
PALB2-201ENST00000261584 LRRD1A4D1F6 860 aa10.84□□□□□ -0.67
PALB2-201ENST00000261584 F8VZ95 297 aa10.84□□□□□ -0.67
PALB2-201ENST00000261584 ATP2A1O14983 1001 aa10.84□□□□□ -0.67
PALB2-201ENST00000261584 PSMD2Q13200 908 aa10.84□□□□□ -0.67
PALB2-201ENST00000261584 C6orf118Q5T5N4 469 aa10.84□□□□□ -0.67
PALB2-201ENST00000261584 CAPRIN2Q6IMN6 1127 aaKnown RBP10.84□□□□□ -0.67
PALB2-201ENST00000261584 SCYL2Q6P3W7 929 aa10.84□□□□□ -0.67
PALB2-201ENST00000261584 LRRC55Q6ZSA7 311 aa10.84□□□□□ -0.67
PALB2-201ENST00000261584 RFFLQ8WZ73 363 aa10.84□□□□□ -0.67
PALB2-201ENST00000261584 ZWILCHQ9H900 591 aa10.84□□□□□ -0.67
PALB2-201ENST00000261584 TNS3Q68CZ2 1445 aa10.84□□□□□ -0.67
PALB2-201ENST00000261584 F5H6K3 240 aa10.84□□□□□ -0.67
PALB2-201ENST00000261584 SAT1P21673 171 aa10.84□□□□□ -0.67
PALB2-201ENST00000261584 RCAN1P53805 252 aa10.84□□□□□ -0.67
PALB2-201ENST00000261584 SMTNP53814 917 aa10.84□□□□□ -0.67
PALB2-201ENST00000261584 YWHAGP61981 247 aaKnown RBP eCLIP10.84□□□□□ -0.67
PALB2-201ENST00000261584 BASP1P80723 227 aaKnown RBP10.84□□□□□ -0.67
PALB2-201ENST00000261584 KLRC3Q07444 240 aa10.84□□□□□ -0.67
PALB2-201ENST00000261584 ABCB5Q2M3G0 1257 aa10.84□□□□□ -0.67
PALB2-201ENST00000261584 WDR44Q5JSH3 913 aa10.84□□□□□ -0.67
PALB2-201ENST00000261584 CYFIP1Q7L576 1253 aa10.84□□□□□ -0.67
PALB2-201ENST00000261584 TMC3Q7Z5M5 1100 aa10.84□□□□□ -0.67
PALB2-201ENST00000261584 PALM2Q8IXS6 379 aa10.84□□□□□ -0.67
PALB2-201ENST00000261584 PDCD7Q8N8D1 485 aaKnown RBP10.84□□□□□ -0.67
PALB2-201ENST00000261584 IQCDQ96DY2 449 aa10.84□□□□□ -0.67
PALB2-201ENST00000261584 NUDCD1Q96RS6 583 aa10.84□□□□□ -0.67
PALB2-201ENST00000261584 CSRNP1Q96S65 589 aa10.84□□□□□ -0.67
PALB2-201ENST00000261584 TTC1Q99614 292 aa10.84□□□□□ -0.67
PALB2-201ENST00000261584 NPHS2Q9NP85 383 aa10.84□□□□□ -0.67
PALB2-201ENST00000261584 GINM1Q9NU53 330 aa10.84□□□□□ -0.67
PALB2-201ENST00000261584 C3P01024 1663 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms