RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 SERPINB12Q96P63 405 aa7.77□□□□□ -1.17
CSDE1-201ENST00000261443 FAM192AQ9GZU8 254 aa7.77□□□□□ -1.17
CSDE1-201ENST00000261443 CARD9Q9H257 536 aa7.77□□□□□ -1.17
CSDE1-201ENST00000261443 ZWILCHQ9H900 591 aa7.77□□□□□ -1.17
CSDE1-201ENST00000261443 NKIRAS1Q9NYS0 192 aa7.77□□□□□ -1.17
CSDE1-201ENST00000261443 USP20Q9Y2K6 914 aa7.77□□□□□ -1.17
CSDE1-201ENST00000261443 UTRNP46939 3433 aa7.77□□□□□ -1.17
CSDE1-201ENST00000261443 DLEC1Q9Y238 1755 aa7.77□□□□□ -1.17
CSDE1-201ENST00000261443 MAGEA13PA6NCF6 341 aa7.77□□□□□ -1.17
CSDE1-201ENST00000261443 MAPK13O15264 365 aa7.77□□□□□ -1.17
CSDE1-201ENST00000261443 EYA4O95677 639 aa7.77□□□□□ -1.17
CSDE1-201ENST00000261443 PTGIRP43119 386 aa7.77□□□□□ -1.17
CSDE1-201ENST00000261443 SCNN1BP51168 640 aa7.77□□□□□ -1.17
CSDE1-201ENST00000261443 GALCP54803 685 aa7.77□□□□□ -1.17
CSDE1-201ENST00000261443 MPP2Q14168 576 aa7.77□□□□□ -1.17
CSDE1-201ENST00000261443 SNX30Q5VWJ9 437 aa7.77□□□□□ -1.17
CSDE1-201ENST00000261443 FOXR2Q6PJQ5 311 aa7.77□□□□□ -1.17
CSDE1-201ENST00000261443 CCNJLQ8IV13 435 aa7.77□□□□□ -1.17
CSDE1-201ENST00000261443 SYCP3Q8IZU3 236 aa7.77□□□□□ -1.17
CSDE1-201ENST00000261443 DAGLBQ8NCG7 672 aa7.77□□□□□ -1.17
CSDE1-201ENST00000261443 SLC35G2Q8TBE7 412 aa7.77□□□□□ -1.17
CSDE1-201ENST00000261443 SCG3Q8WXD2 468 aaKnown RBP7.77□□□□□ -1.17
CSDE1-201ENST00000261443 CRAMP1Q96RY5 1269 aa7.77□□□□□ -1.17
CSDE1-201ENST00000261443 NT5C3AQ9H0P0 336 aa7.77□□□□□ -1.17
CSDE1-201ENST00000261443 VCX3BQ9H321 246 aa7.77□□□□□ -1.17
CSDE1-201ENST00000261443 VCX3AQ9NNX9 186 aa7.77□□□□□ -1.17
CSDE1-201ENST00000261443 TBC1D7Q9P0N9 293 aa7.77□□□□□ -1.17
CSDE1-201ENST00000261443 INTUQ9ULD6 942 aa7.77□□□□□ -1.17
CSDE1-201ENST00000261443 PFASO15067 1338 aa7.77□□□□□ -1.17
CSDE1-201ENST00000261443 USP17L12C9JPN9 530 aa7.76□□□□□ -1.17
CSDE1-201ENST00000261443 USP17L21D6R901 530 aa7.76□□□□□ -1.17
CSDE1-201ENST00000261443 CETN3O15182 167 aa7.76□□□□□ -1.17
CSDE1-201ENST00000261443 ZSCAN9O15535 394 aaPredicted RBP7.76□□□□□ -1.17
CSDE1-201ENST00000261443 PHF2O75151 1096 aa7.76□□□□□ -1.17
CSDE1-201ENST00000261443 MAGEA8P43361 318 aa7.76□□□□□ -1.17
CSDE1-201ENST00000261443 ADCY1Q08828 1119 aa7.76□□□□□ -1.17
CSDE1-201ENST00000261443 STRN3Q13033 797 aa7.76□□□□□ -1.17
CSDE1-201ENST00000261443 NONOQ15233 471 aaKnown RBP eCLIP7.76□□□□□ -1.172e-6■■□□□ 12.7
CSDE1-201ENST00000261443 CLUL1Q15846 466 aa7.76□□□□□ -1.17
CSDE1-201ENST00000261443 PTPRN2Q92932 1015 aa7.76□□□□□ -1.17
CSDE1-201ENST00000261443 SLC7A6OSQ96CW6 309 aaPredicted RBP7.76□□□□□ -1.17
CSDE1-201ENST00000261443 PNMA5Q96PV4 448 aa7.76□□□□□ -1.17
CSDE1-201ENST00000261443 PLEKHG4BQ96PX9 1271 aa7.76□□□□□ -1.17
CSDE1-201ENST00000261443 TIPINQ9BVW5 301 aa7.76□□□□□ -1.17
CSDE1-201ENST00000261443 LRRC27Q9C0I9 530 aa7.76□□□□□ -1.17
CSDE1-201ENST00000261443 OCEL1Q9H607 264 aa7.76□□□□□ -1.17
CSDE1-201ENST00000261443 ATP8A2Q9NTI2 1148 aa7.76□□□□□ -1.17
CSDE1-201ENST00000261443 PHF24Q9UPV7 400 aa7.76□□□□□ -1.17
CSDE1-201ENST00000261443 CHKBQ9Y259 395 aa7.76□□□□□ -1.17
CSDE1-201ENST00000261443 USH1CQ9Y6N9 552 aa7.76□□□□□ -1.17
CSDE1-201ENST00000261443 ANKRD36CQ5JPF3 1778 aa7.76□□□□□ -1.17
CSDE1-201ENST00000261443 PLCH1Q4KWH8 1693 aa7.76□□□□□ -1.17
CSDE1-201ENST00000261443 TSPY2A6NKD2 308 aa7.76□□□□□ -1.17
CSDE1-201ENST00000261443 SIGLEC16A6NMB1 481 aa7.76□□□□□ -1.17
CSDE1-201ENST00000261443 DDX3XO00571 662 aaKnown RBP eCLIP7.76□□□□□ -1.176e-27■■■□□ 16.5
CSDE1-201ENST00000261443 TJP3O95049 919 aa7.76□□□□□ -1.17
CSDE1-201ENST00000261443 TAC1P20366 129 aa7.76□□□□□ -1.17
CSDE1-201ENST00000261443 HOXA7P31268 230 aaPredicted RBP7.76□□□□□ -1.17
CSDE1-201ENST00000261443 CHRNA3P32297 505 aa7.76□□□□□ -1.17
CSDE1-201ENST00000261443 PRKCIP41743 596 aa7.76□□□□□ -1.17
CSDE1-201ENST00000261443 YARSP54577 528 aaKnown RBP7.76□□□□□ -1.17
CSDE1-201ENST00000261443 MARSP56192 900 aaKnown RBP7.76□□□□□ -1.17
CSDE1-201ENST00000261443 DYNLL1P63167 89 aaKnown RBP7.76□□□□□ -1.17
CSDE1-201ENST00000261443 COASYQ13057 564 aa7.76□□□□□ -1.17
CSDE1-201ENST00000261443 NKX1-1Q15270 411 aaPredicted RBP7.76□□□□□ -1.17
CSDE1-201ENST00000261443 KHDC1Q4VXA5 237 aaKnown RBP7.76□□□□□ -1.17
CSDE1-201ENST00000261443 TRMT10CQ7L0Y3 403 aaKnown RBP7.76□□□□□ -1.17
CSDE1-201ENST00000261443 NEK8Q86SG6 692 aa7.76□□□□□ -1.17
CSDE1-201ENST00000261443 RBM46Q8TBY0 533 aaKnown RBP7.76□□□□□ -1.17
CSDE1-201ENST00000261443 RAD54LQ92698 747 aa7.76□□□□□ -1.17
CSDE1-201ENST00000261443 DNAAF2Q9NVR5 837 aaKnown RBP7.76□□□□□ -1.17
CSDE1-201ENST00000261443 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.76□□□□□ -1.17
CSDE1-201ENST00000261443 BARHL2Q9NY43 387 aa7.76□□□□□ -1.17
CSDE1-201ENST00000261443 PDP2Q9P2J9 529 aa7.76□□□□□ -1.17
CSDE1-201ENST00000261443 ATXN10Q9UBB4 475 aa7.76□□□□□ -1.17
CSDE1-201ENST00000261443 MROH7Q68CQ1 1323 aa7.76□□□□□ -1.17
CSDE1-201ENST00000261443 DCTN3O75935 186 aa7.76□□□□□ -1.17
CSDE1-201ENST00000261443 CBX6O95503 412 aa7.76□□□□□ -1.17
CSDE1-201ENST00000261443 FGRP09769 529 aa7.76□□□□□ -1.17
CSDE1-201ENST00000261443 ABCB4P21439 1286 aa7.76□□□□□ -1.17
CSDE1-201ENST00000261443 ANXA13P27216 316 aa7.76□□□□□ -1.17
CSDE1-201ENST00000261443 MARK3P27448 753 aa7.76□□□□□ -1.17
CSDE1-201ENST00000261443 TPP2P29144 1249 aaPredicted RBP7.76□□□□□ -1.17
CSDE1-201ENST00000261443 RCN1Q15293 331 aa7.76□□□□□ -1.17
CSDE1-201ENST00000261443 FAM26FQ5R3K3 315 aa7.76□□□□□ -1.17
CSDE1-201ENST00000261443 AADACL2Q6P093 401 aa7.76□□□□□ -1.17
CSDE1-201ENST00000261443 CCDC137Q6PK04 289 aaKnown RBP7.76□□□□□ -1.17
CSDE1-201ENST00000261443 KRT25Q7Z3Z0 450 aa7.76□□□□□ -1.17
CSDE1-201ENST00000261443 ARHGAP18Q8N392 663 aa7.76□□□□□ -1.17
CSDE1-201ENST00000261443 BRIP1Q9BX63 1249 aa7.76□□□□□ -1.17
CSDE1-201ENST00000261443 CDC42EP4Q9H3Q1 356 aaKnown RBP7.76□□□□□ -1.17
CSDE1-201ENST00000261443 TMOD4Q9NZQ9 345 aa7.76□□□□□ -1.17
CSDE1-201ENST00000261443 HDAC9Q9UKV0 1011 aa7.76□□□□□ -1.17
CSDE1-201ENST00000261443 MTMR7Q9Y216 660 aa7.76□□□□□ -1.17
CSDE1-201ENST00000261443 PTPN22Q9Y2R2 807 aa7.76□□□□□ -1.17
CSDE1-201ENST00000261443 ATP8B3O60423 1300 aa7.75□□□□□ -1.17
CSDE1-201ENST00000261443 ATAD5Q96QE3 1844 aa7.75□□□□□ -1.17
CSDE1-201ENST00000261443 FAM170AA1A519 330 aa7.75□□□□□ -1.17
CSDE1-201ENST00000261443 T-ENOLP0DO92 83 aa7.75□□□□□ -1.17
CSDE1-201ENST00000261443 FOXN2P32314 431 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms