RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 RBM41Q96IZ5 413 aaKnown RBP12.9□□□□□ -0.34
COL8A1-201ENST00000261037 DCP1AQ9NPI6 582 aaPredicted RBP12.9□□□□□ -0.34
COL8A1-201ENST00000261037 HNRNPCL2B2RXH8 293 aa12.9□□□□□ -0.34
COL8A1-201ENST00000261037 HNRNPCL1O60812 293 aaKnown RBP12.9□□□□□ -0.34
COL8A1-201ENST00000261037 TADA3O75528 432 aa12.9□□□□□ -0.34
COL8A1-201ENST00000261037 EIF3BP55884 814 aaKnown RBP12.9□□□□□ -0.34
COL8A1-201ENST00000261037 POU5F1BQ06416 359 aa12.9□□□□□ -0.34
COL8A1-201ENST00000261037 BRINP3Q76B58 766 aa12.9□□□□□ -0.34
COL8A1-201ENST00000261037 SYT2Q8N9I0 419 aaPredicted RBP12.9□□□□□ -0.34
COL8A1-201ENST00000261037 SERPINI1Q99574 410 aa12.9□□□□□ -0.34
COL8A1-201ENST00000261037 HMGB1P1B2RPK0 211 aaPredicted RBP12.9□□□□□ -0.34
COL8A1-201ENST00000261037 PFDN1O60925 122 aa12.9□□□□□ -0.34
COL8A1-201ENST00000261037 LCP1P13796 627 aa12.9□□□□□ -0.34
COL8A1-201ENST00000261037 BEND6Q5SZJ8 279 aaPredicted RBP12.9□□□□□ -0.34
COL8A1-201ENST00000261037 EPM2AIP1Q7L775 607 aaPredicted RBP12.9□□□□□ -0.34
COL8A1-201ENST00000261037 LXNQ9BS40 222 aa12.9□□□□□ -0.34
COL8A1-201ENST00000261037 ZNF521Q96K83 1311 aa12.9□□□□□ -0.34
COL8A1-201ENST00000261037 ESYT3A0FGR9 886 aa12.9□□□□□ -0.34
COL8A1-201ENST00000261037 H0Y3Z8 333 aa12.9□□□□□ -0.34
COL8A1-201ENST00000261037 FOXN1O15353 648 aa12.9□□□□□ -0.34
COL8A1-201ENST00000261037 ANP32DO95626 131 aa12.9□□□□□ -0.34
COL8A1-201ENST00000261037 PAPOLAP51003 745 aaKnown RBP12.9□□□□□ -0.34
COL8A1-201ENST00000261037 POLE2P56282 527 aa12.9□□□□□ -0.34
COL8A1-201ENST00000261037 RBBP7Q16576 425 aa12.9□□□□□ -0.34
COL8A1-201ENST00000261037 GLE1Q53GS7 698 aaKnown RBP12.9□□□□□ -0.34
COL8A1-201ENST00000261037 TMEM35BQ8NCS4 154 aa12.9□□□□□ -0.34
COL8A1-201ENST00000261037 MID2Q9UJV3 735 aa12.9□□□□□ -0.34
COL8A1-201ENST00000261037 KIF28PB7ZC32 967 aa12.89□□□□□ -0.35
COL8A1-201ENST00000261037 GGCXP38435 758 aa12.89□□□□□ -0.35
COL8A1-201ENST00000261037 ESRRGP62508 458 aa12.89□□□□□ -0.35
COL8A1-201ENST00000261037 ACCSLQ4AC99 568 aa12.89□□□□□ -0.35
COL8A1-201ENST00000261037 HSP90AA5PQ58FG0 334 aa12.89□□□□□ -0.35
COL8A1-201ENST00000261037 KDELC2Q7Z4H8 507 aa12.89□□□□□ -0.35
COL8A1-201ENST00000261037 ZBTB18Q99592 522 aa12.89□□□□□ -0.35
COL8A1-201ENST00000261037 TRIM15Q9C019 465 aa12.89□□□□□ -0.35
COL8A1-201ENST00000261037 KLHL11Q9NVR0 708 aa12.89□□□□□ -0.35
COL8A1-201ENST00000261037 SCHIP1Q9P0W5 487 aaPredicted RBP12.89□□□□□ -0.35
COL8A1-201ENST00000261037 CAPN11Q9UMQ6 739 aa12.89□□□□□ -0.35
COL8A1-201ENST00000261037 SYNGAP1Q96PV0 1343 aa12.89□□□□□ -0.35
COL8A1-201ENST00000261037 GUCY2CP25092 1073 aa12.89□□□□□ -0.35
COL8A1-201ENST00000261037 PPARGP37231 505 aaPredicted RBP12.89□□□□□ -0.35
COL8A1-201ENST00000261037 PSMC1P62191 440 aaKnown RBP12.89□□□□□ -0.35
COL8A1-201ENST00000261037 SPARCL1Q14515 664 aa12.89□□□□□ -0.35
COL8A1-201ENST00000261037 DRAP1Q14919 205 aaPredicted RBP12.89□□□□□ -0.35
COL8A1-201ENST00000261037 KNOP1Q1ED39 458 aaKnown RBP12.89□□□□□ -0.35
COL8A1-201ENST00000261037 RNF135Q8IUD6 432 aa12.89□□□□□ -0.35
COL8A1-201ENST00000261037 SRRM1Q8IYB3 904 aaKnown RBP12.89□□□□□ -0.35
COL8A1-201ENST00000261037 FAM167AQ96KS9 214 aa12.89□□□□□ -0.35
COL8A1-201ENST00000261037 TUBB6Q9BUF5 446 aa12.89□□□□□ -0.35
COL8A1-201ENST00000261037 HPCAL4Q9UM19 191 aa12.89□□□□□ -0.35
COL8A1-201ENST00000261037 SPATA31A3Q5VYP0 1347 aa12.89□□□□□ -0.35
COL8A1-201ENST00000261037 PTCH1Q13635 1447 aa12.89□□□□□ -0.35
COL8A1-201ENST00000261037 DFFAO00273 331 aa12.89□□□□□ -0.35
COL8A1-201ENST00000261037 GNAT1P11488 350 aa12.89□□□□□ -0.35
COL8A1-201ENST00000261037 FCER1AP12319 257 aa12.89□□□□□ -0.35
COL8A1-201ENST00000261037 EEF1DP29692 281 aaKnown RBP12.89□□□□□ -0.35
COL8A1-201ENST00000261037 IMPG1Q17R60 797 aa12.89□□□□□ -0.35
COL8A1-201ENST00000261037 GIMAP8Q8ND71 665 aaPredicted RBP12.89□□□□□ -0.35
COL8A1-201ENST00000261037 URGCPQ8TCY9 931 aa12.89□□□□□ -0.35
COL8A1-201ENST00000261037 NSUN6Q8TEA1 469 aaKnown RBP12.89□□□□□ -0.35
COL8A1-201ENST00000261037 GIPC2Q8TF65 315 aa12.89□□□□□ -0.35
COL8A1-201ENST00000261037 CCDC124Q96CT7 223 aaKnown RBP12.89□□□□□ -0.35
COL8A1-201ENST00000261037 RPAP1Q9BWH6 1393 aaPredicted RBP12.89□□□□□ -0.35
COL8A1-201ENST00000261037 KRT37O76014 449 aa12.89□□□□□ -0.35
COL8A1-201ENST00000261037 TRIM49P0CI25 452 aa12.89□□□□□ -0.35
COL8A1-201ENST00000261037 TRIM49CP0CI26 452 aa12.89□□□□□ -0.35
COL8A1-201ENST00000261037 PMS2P54278 862 aa12.89□□□□□ -0.35
COL8A1-201ENST00000261037 SPP2Q13103 211 aa12.89□□□□□ -0.35
COL8A1-201ENST00000261037 NDUFAF2Q8N183 169 aa12.89□□□□□ -0.35
COL8A1-201ENST00000261037 CCNYL1Q8N7R7 359 aa12.89□□□□□ -0.35
COL8A1-201ENST00000261037 ATXN7L3BQ96GX2 97 aa12.89□□□□□ -0.35
COL8A1-201ENST00000261037 VPS39Q96JC1 886 aa12.89□□□□□ -0.35
COL8A1-201ENST00000261037 TOPORSQ9NS56 1045 aaPredicted RBP12.89□□□□□ -0.35
COL8A1-201ENST00000261037 ADGRL3Q9HAR2 1447 aa12.89□□□□□ -0.35
COL8A1-201ENST00000261037 CCDC151A5D8V7 595 aa12.89□□□□□ -0.35
COL8A1-201ENST00000261037 NEMP1O14524 444 aa12.89□□□□□ -0.35
COL8A1-201ENST00000261037 SPAG7O75391 227 aa12.89□□□□□ -0.35
COL8A1-201ENST00000261037 ZRANB2O95218 330 aaKnown RBP eCLIP12.89□□□□□ -0.35
COL8A1-201ENST00000261037 CALB1P05937 261 aa12.89□□□□□ -0.35
COL8A1-201ENST00000261037 DMTNQ08495 405 aa12.89□□□□□ -0.35
COL8A1-201ENST00000261037 TMED1Q13445 227 aa12.89□□□□□ -0.35
COL8A1-201ENST00000261037 MB21D2Q8IYB1 491 aaPredicted RBP12.89□□□□□ -0.35
COL8A1-201ENST00000261037 STAG2Q8N3U4 1231 aa12.89□□□□□ -0.35
COL8A1-201ENST00000261037 MCPH1Q8NEM0 835 aa12.89□□□□□ -0.35
COL8A1-201ENST00000261037 CEP19Q96LK0 163 aa12.89□□□□□ -0.35
COL8A1-201ENST00000261037 TRPV6Q9H1D0 765 aa12.89□□□□□ -0.35
COL8A1-201ENST00000261037 SCOCQ9UIL1 159 aa12.89□□□□□ -0.35
COL8A1-201ENST00000261037 DIS3Q9Y2L1 958 aaKnown RBP12.89□□□□□ -0.35
COL8A1-201ENST00000261037 PODXLO00592 558 aa12.88□□□□□ -0.35
COL8A1-201ENST00000261037 CTIFO43310 598 aaKnown RBP12.88□□□□□ -0.35
COL8A1-201ENST00000261037 RECQLP46063 649 aaPredicted RBP12.88□□□□□ -0.35
COL8A1-201ENST00000261037 COPS2P61201 443 aa12.88□□□□□ -0.35
COL8A1-201ENST00000261037 QRICH1Q2TAL8 776 aa12.88□□□□□ -0.35
COL8A1-201ENST00000261037 RGS9BPQ6ZS82 235 aa12.88□□□□□ -0.35
COL8A1-201ENST00000261037 L3MBTL1Q9Y468 752 aa12.88□□□□□ -0.35
COL8A1-201ENST00000261037 STK36Q9NRP7 1315 aa12.88□□□□□ -0.35
COL8A1-201ENST00000261037 IPO5O00410 1097 aaKnown RBP12.88□□□□□ -0.35
COL8A1-201ENST00000261037 GPS1Q13098 491 aa12.88□□□□□ -0.35
COL8A1-201ENST00000261037 RPAINQ86UA6 219 aa12.88□□□□□ -0.35
COL8A1-201ENST00000261037 PPM1NQ8N819 430 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms