RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 CRIPAKQ8N1N5 446 aa9.47□□□□□ -0.89
TMEM258-201ENST00000257262 RNF149Q8NC42 400 aa9.47□□□□□ -0.89
TMEM258-201ENST00000257262 ASAP3Q8TDY4 903 aa9.47□□□□□ -0.89
TMEM258-201ENST00000257262 USP28Q96RU2 1077 aa9.47□□□□□ -0.89
TMEM258-201ENST00000257262 PLIN2Q99541 437 aa9.47□□□□□ -0.89
TMEM258-201ENST00000257262 BHMT2Q9H2M3 363 aa9.47□□□□□ -0.89
TMEM258-201ENST00000257262 POLD4Q9HCU8 107 aa9.47□□□□□ -0.89
TMEM258-201ENST00000257262 GPRC5CQ9NQ84 441 aa9.47□□□□□ -0.89
TMEM258-201ENST00000257262 TFIP11Q9UBB9 837 aaKnown RBP9.47□□□□□ -0.89
TMEM258-201ENST00000257262 DNM3Q9UQ16 869 aa9.47□□□□□ -0.89
TMEM258-201ENST00000257262 LINC01553A4QN01 128 aa9.46□□□□□ -0.9
TMEM258-201ENST00000257262 C9IYK1 514 aa9.46□□□□□ -0.9
TMEM258-201ENST00000257262 DGKIO75912 1065 aa9.46□□□□□ -0.9
TMEM258-201ENST00000257262 EYA4O95677 639 aa9.46□□□□□ -0.9
TMEM258-201ENST00000257262 F13A1P00488 732 aa9.46□□□□□ -0.9
TMEM258-201ENST00000257262 STAG3L1P0CL83 205 aa9.46□□□□□ -0.9
TMEM258-201ENST00000257262 CYP11B2P19099 503 aa9.46□□□□□ -0.9
TMEM258-201ENST00000257262 SFPQP23246 707 aaKnown RBP eCLIP9.46□□□□□ -0.9
TMEM258-201ENST00000257262 GLRA2P23416 452 aa9.46□□□□□ -0.9
TMEM258-201ENST00000257262 LONP1P36776 959 aaKnown RBP9.46□□□□□ -0.9
TMEM258-201ENST00000257262 SARSP49591 514 aaKnown RBP9.46□□□□□ -0.9
TMEM258-201ENST00000257262 GRB10Q13322 594 aa9.46□□□□□ -0.9
TMEM258-201ENST00000257262 CAPSQ13938 189 aa9.46□□□□□ -0.9
TMEM258-201ENST00000257262 SLC39A14Q15043 492 aa9.46□□□□□ -0.9
TMEM258-201ENST00000257262 HYIQ5T013 277 aa9.46□□□□□ -0.9
TMEM258-201ENST00000257262 FAM102BQ5T8I3 360 aa9.46□□□□□ -0.9
TMEM258-201ENST00000257262 SLC24A5Q71RS6 500 aa9.46□□□□□ -0.9
TMEM258-201ENST00000257262 SRGAP1Q7Z6B7 1085 aa9.46□□□□□ -0.9
TMEM258-201ENST00000257262 CABP7Q86V35 215 aa9.46□□□□□ -0.9
TMEM258-201ENST00000257262 NPAS4Q8IUM7 802 aa9.46□□□□□ -0.9
TMEM258-201ENST00000257262 MCPH1Q8NEM0 835 aa9.46□□□□□ -0.9
TMEM258-201ENST00000257262 MYLIPQ8WY64 445 aa9.46□□□□□ -0.9
TMEM258-201ENST00000257262 ZNF689Q96CS4 500 aaPredicted RBP9.46□□□□□ -0.9
TMEM258-201ENST00000257262 AK8Q96MA6 479 aa9.46□□□□□ -0.9
TMEM258-201ENST00000257262 YME1L1Q96TA2 773 aa9.46□□□□□ -0.9
TMEM258-201ENST00000257262 NT5C3AQ9H0P0 336 aa9.46□□□□□ -0.9
TMEM258-201ENST00000257262 CSRNP2Q9H175 543 aa9.46□□□□□ -0.9
TMEM258-201ENST00000257262 POLR3FQ9H1D9 316 aaPredicted RBP9.46□□□□□ -0.9
TMEM258-201ENST00000257262 PRDM12Q9H4Q4 367 aa9.46□□□□□ -0.9
TMEM258-201ENST00000257262 MINDY3Q9H8M7 445 aa9.46□□□□□ -0.9
TMEM258-201ENST00000257262 C1orf112Q9NSG2 853 aa9.46□□□□□ -0.9
TMEM258-201ENST00000257262 FBXO2Q9UK22 296 aaPredicted RBP9.46□□□□□ -0.9
TMEM258-201ENST00000257262 LRFN2Q9ULH4 789 aa9.46□□□□□ -0.9
TMEM258-201ENST00000257262 SRPRBQ9Y5M8 271 aaKnown RBP9.46□□□□□ -0.9
TMEM258-201ENST00000257262 CHD9Q3L8U1 2897 aa9.46□□□□□ -0.9
TMEM258-201ENST00000257262 NLRC5Q86WI3 1866 aa9.45□□□□□ -0.9
TMEM258-201ENST00000257262 RFXAPO00287 272 aa9.45□□□□□ -0.9
TMEM258-201ENST00000257262 UBA7P41226 1012 aa9.45□□□□□ -0.9
TMEM258-201ENST00000257262 PTENP60484 403 aa9.45□□□□□ -0.9
TMEM258-201ENST00000257262 FAM189BP81408 668 aa9.45□□□□□ -0.9
TMEM258-201ENST00000257262 POU5F1BQ06416 359 aa9.45□□□□□ -0.9
TMEM258-201ENST00000257262 TFDP1Q14186 410 aa9.45□□□□□ -0.9
TMEM258-201ENST00000257262 FOXD4L6Q3SYB3 417 aaPredicted RBP9.45□□□□□ -0.9
TMEM258-201ENST00000257262 SPECC1Q5M775 1068 aa9.45□□□□□ -0.9
TMEM258-201ENST00000257262 FOXD4L3Q6VB84 417 aaPredicted RBP9.45□□□□□ -0.9
TMEM258-201ENST00000257262 USP49Q70CQ1 688 aa9.45□□□□□ -0.9
TMEM258-201ENST00000257262 CATSPER4Q7RTX7 472 aa9.45□□□□□ -0.9
TMEM258-201ENST00000257262 KCTD17Q8N5Z5 321 aa9.45□□□□□ -0.9
TMEM258-201ENST00000257262 ARNTL2Q8WYA1 636 aa9.45□□□□□ -0.9
TMEM258-201ENST00000257262 CALML4Q96GE6 196 aa9.45□□□□□ -0.9
TMEM258-201ENST00000257262 CDK5RAP3Q96JB5 506 aa9.45□□□□□ -0.9
TMEM258-201ENST00000257262 ZNF396Q96N95 335 aaPredicted RBP9.45□□□□□ -0.9
TMEM258-201ENST00000257262 CLIC6Q96NY7 704 aa9.45□□□□□ -0.9
TMEM258-201ENST00000257262 CHST12Q9NRB3 414 aa9.45□□□□□ -0.9
TMEM258-201ENST00000257262 PCDHB7Q9Y5E2 793 aa9.45□□□□□ -0.9
TMEM258-201ENST00000257262 COL4A6Q14031 1691 aa9.45□□□□□ -0.9
TMEM258-201ENST00000257262 RALGAPA2Q2PPJ7 1873 aa9.45□□□□□ -0.9
TMEM258-201ENST00000257262 FNDC1Q4ZHG4 1894 aaPredicted RBP9.45□□□□□ -0.9
TMEM258-201ENST00000257262 TTC3P53804 2025 aa9.44□□□□□ -0.9
TMEM258-201ENST00000257262 A0A0U1RQF3 1178 aa9.44□□□□□ -0.9
TMEM258-201ENST00000257262 INO80B-WBP1J3KQ70 363 aa9.44□□□□□ -0.9
TMEM258-201ENST00000257262 PHKA2P46019 1235 aa9.44□□□□□ -0.9
TMEM258-201ENST00000257262 NASPP49321 788 aaPredicted RBP9.44□□□□□ -0.9
TMEM258-201ENST00000257262 ERVK-21P61565 698 aa9.44□□□□□ -0.9
TMEM258-201ENST00000257262 BTG3Q14201 252 aaPredicted RBP9.44□□□□□ -0.9
TMEM258-201ENST00000257262 BECN1Q14457 450 aa9.44□□□□□ -0.9
TMEM258-201ENST00000257262 KARSQ15046 597 aaKnown RBP9.44□□□□□ -0.9
TMEM258-201ENST00000257262 TMEM119Q4V9L6 283 aa9.44□□□□□ -0.9
TMEM258-201ENST00000257262 RINT1Q6NUQ1 792 aa9.44□□□□□ -0.9
TMEM258-201ENST00000257262 C1orf186Q6ZWK4 172 aa9.44□□□□□ -0.9
TMEM258-201ENST00000257262 ECHDC2Q86YB7 292 aa9.44□□□□□ -0.9
TMEM258-201ENST00000257262 FIBCD1Q8N539 461 aa9.44□□□□□ -0.9
TMEM258-201ENST00000257262 SYT2Q8N9I0 419 aaPredicted RBP9.44□□□□□ -0.9
TMEM258-201ENST00000257262 LINC00301Q8NCQ3 95 aa9.44□□□□□ -0.9
TMEM258-201ENST00000257262 EPSTI1Q96J88 318 aa9.44□□□□□ -0.9
TMEM258-201ENST00000257262 TGS1Q96RS0 853 aaKnown RBP9.44□□□□□ -0.9
TMEM258-201ENST00000257262 GAS2L1Q99501 681 aaPredicted RBP9.44□□□□□ -0.9
TMEM258-201ENST00000257262 C17orf80Q9BSJ5 609 aa9.44□□□□□ -0.9
TMEM258-201ENST00000257262 ELAC1Q9H777 363 aaKnown RBP9.44□□□□□ -0.9
TMEM258-201ENST00000257262 RC3H2Q9HBD1 1191 aaKnown RBP9.44□□□□□ -0.9
TMEM258-201ENST00000257262 AGPAT5Q9NUQ2 364 aa9.44□□□□□ -0.9
TMEM258-201ENST00000257262 TMEM161AQ9NX61 479 aa9.44□□□□□ -0.9
TMEM258-201ENST00000257262 DACT1Q9NYF0 836 aa9.44□□□□□ -0.9
TMEM258-201ENST00000257262 MTUS1Q9ULD2 1270 aa9.44□□□□□ -0.9
TMEM258-201ENST00000257262 PIN4Q9Y237 131 aaKnown RBP9.44□□□□□ -0.9
TMEM258-201ENST00000257262 STXBP5LQ9Y2K9 1186 aa9.44□□□□□ -0.9
TMEM258-201ENST00000257262 ADGRA3Q8IWK6 1321 aa9.44□□□□□ -0.9
TMEM258-201ENST00000257262 KIAA1671Q9BY89 1806 aa9.44□□□□□ -0.9
TMEM258-201ENST00000257262 COL4A4P53420 1690 aaPredicted RBP9.43□□□□□ -0.9
TMEM258-201ENST00000257262 EPOPA6NHQ4 379 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms