RNA–Protein interactions for RNA: ENST00000253814.5

NDFIP1-201, Transcript of Nedd4 family interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP1, Length 3,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-201ENST00000253814 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.84■□□□□ 0.61
NDFIP1-201ENST00000253814 FAM20AQ96MK3 541 aa18.84■□□□□ 0.61
NDFIP1-201ENST00000253814 APEX2Q9UBZ4 518 aa18.84■□□□□ 0.61
NDFIP1-201ENST00000253814 SUFUQ9UMX1 484 aa18.84■□□□□ 0.61
NDFIP1-201ENST00000253814 GOLGA8SH3BPF8 625 aa18.83■□□□□ 0.61
NDFIP1-201ENST00000253814 GOLGA8MH3BSY2 632 aa18.83■□□□□ 0.61
NDFIP1-201ENST00000253814 FOXN3O00409 490 aaPredicted RBP18.83■□□□□ 0.61
NDFIP1-201ENST00000253814 SLC16A4O15374 487 aa18.83■□□□□ 0.61
NDFIP1-201ENST00000253814 STAT2P52630 851 aa18.83■□□□□ 0.61
NDFIP1-201ENST00000253814 TRPM8Q7Z2W7 1104 aa18.83■□□□□ 0.61
NDFIP1-201ENST00000253814 CHURC1Q8WUH1 139 aa18.83■□□□□ 0.61
NDFIP1-201ENST00000253814 MAIP1Q8WWC4 291 aa18.83■□□□□ 0.61
NDFIP1-201ENST00000253814 RNF25Q96BH1 459 aaPredicted RBP18.83■□□□□ 0.61
NDFIP1-201ENST00000253814 ACCSQ96QU6 501 aa18.83■□□□□ 0.61
NDFIP1-201ENST00000253814 SMC6Q96SB8 1091 aa18.83■□□□□ 0.61
NDFIP1-201ENST00000253814 INTUQ9ULD6 942 aa18.83■□□□□ 0.61
NDFIP1-201ENST00000253814 BCL9O00512 1426 aa18.83■□□□□ 0.61
NDFIP1-201ENST00000253814 C2CD6Q53TS8 623 aa18.83■□□□□ 0.61
NDFIP1-201ENST00000253814 SCYL3Q8IZE3 742 aa18.83■□□□□ 0.61
NDFIP1-201ENST00000253814 ANKRD35Q8N283 1001 aa18.83■□□□□ 0.61
NDFIP1-201ENST00000253814 ELMO3Q96BJ8 720 aa18.83■□□□□ 0.61
NDFIP1-201ENST00000253814 RAB3IPQ96QF0 476 aaPredicted RBP18.83■□□□□ 0.61
NDFIP1-201ENST00000253814 IKZF4Q9H2S9 585 aa18.83■□□□□ 0.61
NDFIP1-201ENST00000253814 GPR75-ASB3A0A0A6YYF3 556 aa18.83■□□□□ 0.6
NDFIP1-201ENST00000253814 VAMP7P51809 220 aa18.83■□□□□ 0.6
NDFIP1-201ENST00000253814 IFI35P80217 286 aaPredicted RBP18.83■□□□□ 0.6
NDFIP1-201ENST00000253814 KRT17Q04695 432 aa18.83■□□□□ 0.6
NDFIP1-201ENST00000253814 GIT2Q14161 759 aa18.83■□□□□ 0.6
NDFIP1-201ENST00000253814 COG2Q14746 738 aa18.83■□□□□ 0.6
NDFIP1-201ENST00000253814 PADI6Q6TGC4 694 aa18.83■□□□□ 0.6
NDFIP1-201ENST00000253814 CCDC89Q8N998 374 aa18.83■□□□□ 0.6
NDFIP1-201ENST00000253814 INPP4AQ96PE3 977 aaPredicted RBP18.83■□□□□ 0.6
NDFIP1-201ENST00000253814 SH3GL2Q99962 352 aa18.83■□□□□ 0.6
NDFIP1-201ENST00000253814 RTFDC1Q9BY42 306 aaPredicted RBP18.83■□□□□ 0.6
NDFIP1-201ENST00000253814 AIPL1Q9NZN9 384 aa18.83■□□□□ 0.6
NDFIP1-201ENST00000253814 CCPG1Q9ULG6 757 aa18.83■□□□□ 0.6
NDFIP1-201ENST00000253814 PCDHGC5Q9Y5F6 944 aa18.83■□□□□ 0.6
NDFIP1-201ENST00000253814 TNS2Q63HR2 1409 aa18.83■□□□□ 0.6
NDFIP1-201ENST00000253814 F8VZ95 297 aa18.82■□□□□ 0.6
NDFIP1-201ENST00000253814 NT5C2P49902 561 aa18.82■□□□□ 0.6
NDFIP1-201ENST00000253814 PPP4CP60510 307 aa18.82■□□□□ 0.6
NDFIP1-201ENST00000253814 ITGB3BPQ13352 177 aaPredicted RBP18.82■□□□□ 0.6
NDFIP1-201ENST00000253814 DHX34Q14147 1143 aaKnown RBP18.82■□□□□ 0.6
NDFIP1-201ENST00000253814 PPP1R18Q6NYC8 613 aa18.82■□□□□ 0.6
NDFIP1-201ENST00000253814 ACTRT1Q8TDG2 376 aa18.82■□□□□ 0.6
NDFIP1-201ENST00000253814 TDRD3Q9H7E2 651 aaKnown RBP18.82■□□□□ 0.6
NDFIP1-201ENST00000253814 MRPL11Q9Y3B7 192 aaKnown RBP18.82■□□□□ 0.6
NDFIP1-201ENST00000253814 LMO7Q8WWI1 1683 aa18.82■□□□□ 0.6
NDFIP1-201ENST00000253814 CAMTA1Q9Y6Y1 1673 aa18.82■□□□□ 0.6
NDFIP1-201ENST00000253814 SLIT3O75094 1523 aa18.82■□□□□ 0.6
NDFIP1-201ENST00000253814 TMEM120BA0PK00 339 aa18.82■□□□□ 0.6
NDFIP1-201ENST00000253814 RASSF10A6NK89 507 aa18.82■□□□□ 0.6
NDFIP1-201ENST00000253814 DDX3XO00571 662 aaKnown RBP eCLIP18.82■□□□□ 0.61e-15■■■■□ 21.7
NDFIP1-201ENST00000253814 HNRNPH3P31942 346 aaKnown RBP18.82■□□□□ 0.6
NDFIP1-201ENST00000253814 BFSP1Q12934 665 aa18.82■□□□□ 0.6
NDFIP1-201ENST00000253814 MIGA2Q7L4E1 593 aa18.82■□□□□ 0.6
NDFIP1-201ENST00000253814 PALM2Q8IXS6 379 aa18.82■□□□□ 0.6
NDFIP1-201ENST00000253814 MTMR9Q96QG7 549 aa18.82■□□□□ 0.6
NDFIP1-201ENST00000253814 TRIM6Q9C030 488 aaPredicted RBP18.82■□□□□ 0.6
NDFIP1-201ENST00000253814 SAYSD1Q9NPB0 183 aa18.82■□□□□ 0.6
NDFIP1-201ENST00000253814 EYA4O95677 639 aa18.82■□□□□ 0.6
NDFIP1-201ENST00000253814 DRP2Q13474 957 aa18.82■□□□□ 0.6
NDFIP1-201ENST00000253814 HGSNATQ68CP4 663 aa18.82■□□□□ 0.6
NDFIP1-201ENST00000253814 ZNF662Q6ZS27 426 aa18.82■□□□□ 0.6
NDFIP1-201ENST00000253814 TMC3Q7Z5M5 1100 aa18.82■□□□□ 0.6
NDFIP1-201ENST00000253814 XXYLT1Q8NBI6 393 aa18.82■□□□□ 0.6
NDFIP1-201ENST00000253814 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.82■□□□□ 0.6
NDFIP1-201ENST00000253814 DDX23Q9BUQ8 820 aaKnown RBP18.82■□□□□ 0.6
NDFIP1-201ENST00000253814 PABPC3Q9H361 631 aaKnown RBP18.82■□□□□ 0.6
NDFIP1-201ENST00000253814 RIOX1Q9H6W3 641 aa18.82■□□□□ 0.6
NDFIP1-201ENST00000253814 NOD2Q9HC29 1040 aa18.82■□□□□ 0.6
NDFIP1-201ENST00000253814 RAB20Q9NX57 234 aa18.82■□□□□ 0.6
NDFIP1-201ENST00000253814 SGK1O00141 431 aa18.81■□□□□ 0.6
NDFIP1-201ENST00000253814 PDHA1P08559 390 aa18.81■□□□□ 0.6
NDFIP1-201ENST00000253814 RPA1P27694 616 aa18.81■□□□□ 0.6
NDFIP1-201ENST00000253814 PPP1R21Q6ZMI0 780 aa18.81■□□□□ 0.6
NDFIP1-201ENST00000253814 SUGP1Q8IWZ8 645 aaKnown RBP18.81■□□□□ 0.6
NDFIP1-201ENST00000253814 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.81■□□□□ 0.6
NDFIP1-201ENST00000253814 LXNQ9BS40 222 aa18.81■□□□□ 0.6
NDFIP1-201ENST00000253814 WDR11Q9BZH6 1224 aa18.81■□□□□ 0.6
NDFIP1-201ENST00000253814 ANKFY1Q9P2R3 1169 aa18.81■□□□□ 0.6
NDFIP1-201ENST00000253814 TROVE2P10155 538 aaKnown RBP eCLIP18.81■□□□□ 0.6
NDFIP1-201ENST00000253814 ATP2A2P16615 1042 aaKnown RBP18.81■□□□□ 0.6
NDFIP1-201ENST00000253814 HOXA7P31268 230 aaPredicted RBP18.81■□□□□ 0.6
NDFIP1-201ENST00000253814 LMBRD2Q68DH5 695 aaPredicted RBP18.81■□□□□ 0.6
NDFIP1-201ENST00000253814 CCDC62Q6P9F0 684 aa18.81■□□□□ 0.6
NDFIP1-201ENST00000253814 DNAJC19Q96DA6 116 aa18.81■□□□□ 0.6
NDFIP1-201ENST00000253814 SPDL1Q96EA4 605 aa18.81■□□□□ 0.6
NDFIP1-201ENST00000253814 KLHL11Q9NVR0 708 aa18.81■□□□□ 0.6
NDFIP1-201ENST00000253814 DCTN4Q9UJW0 460 aa18.81■□□□□ 0.6
NDFIP1-201ENST00000253814 OPLAHO14841 1288 aa18.81■□□□□ 0.6
NDFIP1-201ENST00000253814 ZBTB39O15060 712 aa18.81■□□□□ 0.6
NDFIP1-201ENST00000253814 EIF2AK2P19525 551 aaKnown RBP18.81■□□□□ 0.6
NDFIP1-201ENST00000253814 STRN3Q13033 797 aa18.81■□□□□ 0.6
NDFIP1-201ENST00000253814 LRRC15Q8TF66 581 aa18.81■□□□□ 0.6
NDFIP1-201ENST00000253814 CCDC160A6NGH7 325 aa18.8■□□□□ 0.6
NDFIP1-201ENST00000253814 DCDC2CA8MYV0 355 aa18.8■□□□□ 0.6
NDFIP1-201ENST00000253814 RASSF2P50749 326 aa18.8■□□□□ 0.6
NDFIP1-201ENST00000253814 NFIAQ12857 509 aa18.8■□□□□ 0.6
NDFIP1-201ENST00000253814 MAPK7Q13164 816 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 1274.8 ms