RNA–Protein interactions for RNA: ENST00000253122.9

SLC6A8-201, Transcript of solute carrier family 6 member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A8, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-201ENST00000253122 DDX39AO00148 427 aaKnown RBP17.08■□□□□ 0.32
SLC6A8-201ENST00000253122 HLA-DOAP06340 250 aa17.08■□□□□ 0.32
SLC6A8-201ENST00000253122 CHRNA3P32297 505 aa17.08■□□□□ 0.32
SLC6A8-201ENST00000253122 CASP4P49662 377 aa17.08■□□□□ 0.32
SLC6A8-201ENST00000253122 STRN3Q13033 797 aa17.08■□□□□ 0.32
SLC6A8-201ENST00000253122 TNIP1Q15025 636 aa17.08■□□□□ 0.32
SLC6A8-201ENST00000253122 GBP5Q96PP8 586 aa17.08■□□□□ 0.32
SLC6A8-201ENST00000253122 AIPL1Q9NZN9 384 aa17.08■□□□□ 0.32
SLC6A8-201ENST00000253122 ALG6Q9Y672 507 aa17.08■□□□□ 0.32
SLC6A8-201ENST00000253122 ABCB11O95342 1321 aa17.08■□□□□ 0.32
SLC6A8-201ENST00000253122 APBA3O96018 575 aa17.07■□□□□ 0.32
SLC6A8-201ENST00000253122 PSEN1P49768 467 aa17.07■□□□□ 0.32
SLC6A8-201ENST00000253122 DHX34Q14147 1143 aaKnown RBP17.07■□□□□ 0.32
SLC6A8-201ENST00000253122 KYNUQ16719 465 aa17.07■□□□□ 0.32
SLC6A8-201ENST00000253122 SCFD2Q8WU76 684 aa17.07■□□□□ 0.32
SLC6A8-201ENST00000253122 CCDC127Q96BQ5 260 aa17.07■□□□□ 0.32
SLC6A8-201ENST00000253122 LRRC37BQ96QE4 947 aa17.07■□□□□ 0.32
SLC6A8-201ENST00000253122 SPZ1Q9BXG8 430 aa17.07■□□□□ 0.32
SLC6A8-201ENST00000253122 MYH14Q7Z406 1995 aaKnown RBP17.07■□□□□ 0.32
SLC6A8-201ENST00000253122 SYNGAP1Q96PV0 1343 aa17.07■□□□□ 0.32
SLC6A8-201ENST00000253122 LAMA4Q16363 1823 aa17.07■□□□□ 0.32
SLC6A8-201ENST00000253122 CCDC160A6NGH7 325 aa17.07■□□□□ 0.32
SLC6A8-201ENST00000253122 ATP2A1O14983 1001 aa17.07■□□□□ 0.32
SLC6A8-201ENST00000253122 RIMBP2O15034 1052 aa17.07■□□□□ 0.32
SLC6A8-201ENST00000253122 MYBP10242 640 aa17.07■□□□□ 0.32
SLC6A8-201ENST00000253122 SNAP25P60880 206 aa17.07■□□□□ 0.32
SLC6A8-201ENST00000253122 ITIH4Q14624 930 aa17.07■□□□□ 0.32
SLC6A8-201ENST00000253122 AADACL2Q6P093 401 aa17.07■□□□□ 0.32
SLC6A8-201ENST00000253122 SPICE1Q8N0Z3 855 aa17.07■□□□□ 0.32
SLC6A8-201ENST00000253122 SPDYE1Q8NFV5 336 aaPredicted RBP17.07■□□□□ 0.32
SLC6A8-201ENST00000253122 ERP27Q96DN0 273 aa17.07■□□□□ 0.32
SLC6A8-201ENST00000253122 NAP1L4Q99733 375 aaKnown RBP17.07■□□□□ 0.32
SLC6A8-201ENST00000253122 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.07■□□□□ 0.32
SLC6A8-201ENST00000253122 UFL1O94874 794 aa17.07■□□□□ 0.32
SLC6A8-201ENST00000253122 POTEJP0CG39 1038 aa17.07■□□□□ 0.32
SLC6A8-201ENST00000253122 HSPA6P17066 643 aa17.07■□□□□ 0.32
SLC6A8-201ENST00000253122 SLC8A3P57103 927 aa17.07■□□□□ 0.32
SLC6A8-201ENST00000253122 MAPK7Q13164 816 aa17.07■□□□□ 0.32
SLC6A8-201ENST00000253122 MFSD14BQ5SR56 506 aa17.07■□□□□ 0.32
SLC6A8-201ENST00000253122 ODR4Q5SWX8 454 aa17.07■□□□□ 0.32
SLC6A8-201ENST00000253122 ANKRD20A3Q5VUR7 823 aa17.07■□□□□ 0.32
SLC6A8-201ENST00000253122 ZNF572Q7Z3I7 529 aaPredicted RBP17.07■□□□□ 0.32
SLC6A8-201ENST00000253122 ANKRD35Q8N283 1001 aa17.07■□□□□ 0.32
SLC6A8-201ENST00000253122 SCFD1Q8WVM8 642 aa17.07■□□□□ 0.32
SLC6A8-201ENST00000253122 HEMGNQ9BXL5 484 aa17.07■□□□□ 0.32
SLC6A8-201ENST00000253122 DHX36Q9H2U1 1008 aaKnown RBP17.07■□□□□ 0.32
SLC6A8-201ENST00000253122 TRIM33Q9UPN9 1127 aa17.07■□□□□ 0.32
SLC6A8-201ENST00000253122 DLATP10515 647 aaKnown RBP17.06■□□□□ 0.32
SLC6A8-201ENST00000253122 CA4P22748 312 aa17.06■□□□□ 0.32
SLC6A8-201ENST00000253122 SOX5P35711 763 aa17.06■□□□□ 0.32
SLC6A8-201ENST00000253122 DAGLBQ8NCG7 672 aa17.06■□□□□ 0.32
SLC6A8-201ENST00000253122 LRRC15Q8TF66 581 aa17.06■□□□□ 0.32
SLC6A8-201ENST00000253122 THAP2Q9H0W7 228 aa17.06■□□□□ 0.32
SLC6A8-201ENST00000253122 ANKRD36CQ5JPF3 1778 aa17.06■□□□□ 0.32
SLC6A8-201ENST00000253122 LCA5LO95447 670 aa17.06■□□□□ 0.32
SLC6A8-201ENST00000253122 GSTA1P08263 222 aa17.06■□□□□ 0.32
SLC6A8-201ENST00000253122 ERICH1Q86X53 443 aa17.06■□□□□ 0.32
SLC6A8-201ENST00000253122 IQCGQ9H095 443 aaKnown RBP17.06■□□□□ 0.32
SLC6A8-201ENST00000253122 PALM3A6NDB9 673 aaPredicted RBP17.06■□□□□ 0.32
SLC6A8-201ENST00000253122 BAG2O95816 211 aa17.06■□□□□ 0.32
SLC6A8-201ENST00000253122 RXRBP28702 533 aa17.06■□□□□ 0.32
SLC6A8-201ENST00000253122 SBK1Q52WX2 424 aa17.06■□□□□ 0.32
SLC6A8-201ENST00000253122 TTBK2Q6IQ55 1244 aa17.06■□□□□ 0.32
SLC6A8-201ENST00000253122 FRMD5Q7Z6J6 570 aa17.06■□□□□ 0.32
SLC6A8-201ENST00000253122 DCTN4Q9UJW0 460 aa17.06■□□□□ 0.32
SLC6A8-201ENST00000253122 ASAP2O43150 1006 aa17.05■□□□□ 0.32
SLC6A8-201ENST00000253122 NOL4O94818 638 aa17.05■□□□□ 0.32
SLC6A8-201ENST00000253122 FLT1P17948 1338 aa17.05■□□□□ 0.32
SLC6A8-201ENST00000253122 FXR2P51116 673 aaKnown RBP eCLIP17.05■□□□□ 0.327e-16■■■■□ 22.2
SLC6A8-201ENST00000253122 CCNHP51946 323 aaPredicted RBP17.05■□□□□ 0.32
SLC6A8-201ENST00000253122 KAZNQ674X7 775 aa17.05■□□□□ 0.32
SLC6A8-201ENST00000253122 C6orf89Q6UWU4 347 aa17.05■□□□□ 0.32
SLC6A8-201ENST00000253122 EPM2AIP1Q7L775 607 aaPredicted RBP17.05■□□□□ 0.32
SLC6A8-201ENST00000253122 NT5DC3Q86UY8 548 aa17.05■□□□□ 0.32
SLC6A8-201ENST00000253122 C9orf72Q96LT7 481 aa17.05■□□□□ 0.32
SLC6A8-201ENST00000253122 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.05■□□□□ 0.32
SLC6A8-201ENST00000253122 MAPK13O15264 365 aa17.05■□□□□ 0.32
SLC6A8-201ENST00000253122 ATMINO43313 823 aaPredicted RBP17.05■□□□□ 0.32
SLC6A8-201ENST00000253122 RASA1P20936 1047 aa17.05■□□□□ 0.32
SLC6A8-201ENST00000253122 NFIXQ14938 502 aa17.05■□□□□ 0.32
SLC6A8-201ENST00000253122 SLC30A9Q6PML9 568 aa17.05■□□□□ 0.32
SLC6A8-201ENST00000253122 SEPT14Q6ZU15 432 aa17.05■□□□□ 0.32
SLC6A8-201ENST00000253122 RHOT2Q8IXI1 618 aa17.05■□□□□ 0.32
SLC6A8-201ENST00000253122 SLFN12Q8IYM2 578 aa17.05■□□□□ 0.32
SLC6A8-201ENST00000253122 NR2E1Q9Y466 385 aa17.05■□□□□ 0.32
SLC6A8-201ENST00000253122 EXOC1LA0A1B0GW35 172 aa17.05■□□□□ 0.32
SLC6A8-201ENST00000253122 ARHGEF35A5YM69 484 aa17.05■□□□□ 0.32
SLC6A8-201ENST00000253122 SRRM3A6NNA2 597 aaPredicted RBP17.05■□□□□ 0.32
SLC6A8-201ENST00000253122 A8MUI8 341 aa17.05■□□□□ 0.32
SLC6A8-201ENST00000253122 CTTNQ14247 550 aaKnown RBP17.05■□□□□ 0.32
SLC6A8-201ENST00000253122 ASPRV1Q53RT3 343 aa17.05■□□□□ 0.32
SLC6A8-201ENST00000253122 PPP1R21Q6ZMI0 780 aa17.05■□□□□ 0.32
SLC6A8-201ENST00000253122 RFX8Q6ZV50 586 aa17.05■□□□□ 0.32
SLC6A8-201ENST00000253122 ZC3H18Q86VM9 953 aaKnown RBP17.05■□□□□ 0.32
SLC6A8-201ENST00000253122 FGFBP2Q9BYJ0 223 aa17.05■□□□□ 0.32
SLC6A8-201ENST00000253122 PNMA3Q9UL41 463 aa17.05■□□□□ 0.32
SLC6A8-201ENST00000253122 USP17L10C9JJH3 530 aa17.04■□□□□ 0.32
SLC6A8-201ENST00000253122 DDX3XO00571 662 aaKnown RBP eCLIP17.04■□□□□ 0.322e-16■■■■■ 40.2
SLC6A8-201ENST00000253122 C21orf2O43822 256 aa17.04■□□□□ 0.32
SLC6A8-201ENST00000253122 CTCFP49711 727 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms