RNA–Protein interactions for RNA: ENST00000248566.3

SEM1-201, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEM1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-201ENST00000248566 TRAPPC10P48553 1259 aa14.07□□□□□ -0.16
SEM1-201ENST00000248566 FAM189BP81408 668 aa14.07□□□□□ -0.16
SEM1-201ENST00000248566 ORC2Q13416 577 aaPredicted RBP14.07□□□□□ -0.16
SEM1-201ENST00000248566 TCEAL5Q5H9L2 206 aa14.07□□□□□ -0.16
SEM1-201ENST00000248566 THNSL1Q8IYQ7 743 aa14.07□□□□□ -0.16
SEM1-201ENST00000248566 PLVAPQ9BX97 442 aa14.07□□□□□ -0.16
SEM1-201ENST00000248566 NSUN3Q9H649 340 aaKnown RBP14.07□□□□□ -0.16
SEM1-201ENST00000248566 IGFLR1Q9H665 355 aa14.07□□□□□ -0.16
SEM1-201ENST00000248566 TUFT1Q9NNX1 390 aa14.07□□□□□ -0.16
SEM1-201ENST00000248566 PLAGL2Q9UPG8 496 aa14.07□□□□□ -0.16
SEM1-201ENST00000248566 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.07□□□□□ -0.16
SEM1-201ENST00000248566 PCDHB6Q9Y5E3 794 aa14.07□□□□□ -0.16
SEM1-201ENST00000248566 KIAA1671Q9BY89 1806 aa14.06□□□□□ -0.16
SEM1-201ENST00000248566 ASAP2O43150 1006 aa14.06□□□□□ -0.16
SEM1-201ENST00000248566 DGAT1O75907 488 aa14.06□□□□□ -0.16
SEM1-201ENST00000248566 ERLIN2O94905 339 aa14.06□□□□□ -0.16
SEM1-201ENST00000248566 LYPLA2O95372 231 aa14.06□□□□□ -0.16
SEM1-201ENST00000248566 ITGB1P05556 798 aa14.06□□□□□ -0.16
SEM1-201ENST00000248566 CCT6AP40227 531 aaKnown RBP14.06□□□□□ -0.16
SEM1-201ENST00000248566 PHKA2P46019 1235 aa14.06□□□□□ -0.16
SEM1-201ENST00000248566 RARRES1P49788 294 aa14.06□□□□□ -0.16
SEM1-201ENST00000248566 PTGDRQ13258 359 aa14.06□□□□□ -0.16
SEM1-201ENST00000248566 TFDP1Q14186 410 aa14.06□□□□□ -0.16
SEM1-201ENST00000248566 FERMT3Q86UX7 667 aa14.06□□□□□ -0.16
SEM1-201ENST00000248566 CATSPER3Q86XQ3 398 aa14.06□□□□□ -0.16
SEM1-201ENST00000248566 HELQQ8TDG4 1101 aa14.06□□□□□ -0.16
SEM1-201ENST00000248566 MICAL1Q8TDZ2 1067 aa14.06□□□□□ -0.16
SEM1-201ENST00000248566 ADAMTS19Q8TE59 1207 aa14.06□□□□□ -0.16
SEM1-201ENST00000248566 LPPQ93052 612 aa14.06□□□□□ -0.16
SEM1-201ENST00000248566 TMEM117Q9H0C3 514 aa14.06□□□□□ -0.16
SEM1-201ENST00000248566 LMAN2LQ9H0V9 348 aa14.06□□□□□ -0.16
SEM1-201ENST00000248566 IFT122Q9HBG6 1241 aa14.06□□□□□ -0.16
SEM1-201ENST00000248566 CHST12Q9NRB3 414 aa14.06□□□□□ -0.16
SEM1-201ENST00000248566 FNDC1Q4ZHG4 1894 aaPredicted RBP14.06□□□□□ -0.16
SEM1-201ENST00000248566 A0A0U1RQF3 1178 aa14.05□□□□□ -0.16
SEM1-201ENST00000248566 SPATA31C1P0DKV0 1188 aa14.05□□□□□ -0.16
SEM1-201ENST00000248566 KCNA5P22460 613 aa14.05□□□□□ -0.16
SEM1-201ENST00000248566 TOB1P50616 345 aaPredicted RBP14.05□□□□□ -0.16
SEM1-201ENST00000248566 MXD4Q14582 209 aaPredicted RBP14.05□□□□□ -0.16
SEM1-201ENST00000248566 LARP1BQ659C4 914 aaKnown RBP14.05□□□□□ -0.16
SEM1-201ENST00000248566 HAUS3Q68CZ6 603 aa14.05□□□□□ -0.16
SEM1-201ENST00000248566 SRGAP1Q7Z6B7 1085 aa14.05□□□□□ -0.16
SEM1-201ENST00000248566 COLGALT1Q8NBJ5 622 aa14.05□□□□□ -0.16
SEM1-201ENST00000248566 POF1BQ8WVV4 589 aa14.05□□□□□ -0.16
SEM1-201ENST00000248566 P2RX5Q93086 422 aa14.05□□□□□ -0.16
SEM1-201ENST00000248566 CASD1Q96PB1 797 aa14.05□□□□□ -0.16
SEM1-201ENST00000248566 NACC1Q96RE7 527 aa14.05□□□□□ -0.16
SEM1-201ENST00000248566 POLR3CQ9BUI4 534 aaPredicted RBP14.05□□□□□ -0.16
SEM1-201ENST00000248566 POLR3FQ9H1D9 316 aaPredicted RBP14.05□□□□□ -0.16
SEM1-201ENST00000248566 UBE2ZQ9H832 354 aaPredicted RBP14.05□□□□□ -0.16
SEM1-201ENST00000248566 MINDY3Q9H8M7 445 aa14.05□□□□□ -0.16
SEM1-201ENST00000248566 XPNPEP1Q9NQW7 623 aa14.05□□□□□ -0.16
SEM1-201ENST00000248566 CLDND1Q9NY35 253 aa14.05□□□□□ -0.16
SEM1-201ENST00000248566 LRWD1Q9UFC0 647 aa14.05□□□□□ -0.16
SEM1-201ENST00000248566 INPP5FQ9Y2H2 1132 aa14.05□□□□□ -0.16
SEM1-201ENST00000248566 GTF3C3Q9Y5Q9 886 aa14.05□□□□□ -0.16
SEM1-201ENST00000248566 ARHGEF35A5YM69 484 aa14.04□□□□□ -0.16
SEM1-201ENST00000248566 INO80B-WBP1J3KQ70 363 aa14.04□□□□□ -0.16
SEM1-201ENST00000248566 EOMESO95936 686 aa14.04□□□□□ -0.16
SEM1-201ENST00000248566 SKIP12755 728 aa14.04□□□□□ -0.16
SEM1-201ENST00000248566 LAG3P18627 525 aa14.04□□□□□ -0.16
SEM1-201ENST00000248566 PBX3P40426 434 aa14.04□□□□□ -0.16
SEM1-201ENST00000248566 NCBP1Q09161 790 aaKnown RBP14.04□□□□□ -0.16
SEM1-201ENST00000248566 ZRSR1Q15695 479 aaKnown RBP14.04□□□□□ -0.16
SEM1-201ENST00000248566 NAALADL2Q58DX5 795 aa14.04□□□□□ -0.16
SEM1-201ENST00000248566 CLLU1OSQ5K130 101 aa14.04□□□□□ -0.16
SEM1-201ENST00000248566 LRRC43Q8N309 656 aa14.04□□□□□ -0.16
SEM1-201ENST00000248566 SPPL3Q8TCT6 385 aa14.04□□□□□ -0.16
SEM1-201ENST00000248566 ASAP3Q8TDY4 903 aa14.04□□□□□ -0.16
SEM1-201ENST00000248566 UHRF1Q96T88 793 aaPredicted RBP14.04□□□□□ -0.16
SEM1-201ENST00000248566 BACH2Q9BYV9 841 aa14.04□□□□□ -0.16
SEM1-201ENST00000248566 RAB34Q9BZG1 259 aa14.04□□□□□ -0.16
SEM1-201ENST00000248566 CWH43Q9H720 699 aa14.04□□□□□ -0.16
SEM1-201ENST00000248566 AGPAT5Q9NUQ2 364 aa14.04□□□□□ -0.16
SEM1-201ENST00000248566 FAM105AQ9NUU6 356 aa14.04□□□□□ -0.16
SEM1-201ENST00000248566 RNF19AQ9NV58 838 aa14.04□□□□□ -0.16
SEM1-201ENST00000248566 LRRIQ4A6NIV6 560 aa14.03□□□□□ -0.16
SEM1-201ENST00000248566 H3BQ06 376 aaPredicted RBP14.03□□□□□ -0.16
SEM1-201ENST00000248566 FGF18O76093 207 aa14.03□□□□□ -0.16
SEM1-201ENST00000248566 XRCC6P12956 609 aaKnown RBP eCLIP14.03□□□□□ -0.165e-10■□□□□ 9.2
SEM1-201ENST00000248566 DNAJB1P25685 340 aa14.03□□□□□ -0.16
SEM1-201ENST00000248566 RPA1P27694 616 aa14.03□□□□□ -0.16
SEM1-201ENST00000248566 CA8P35219 290 aa14.03□□□□□ -0.16
SEM1-201ENST00000248566 RNASELQ05823 741 aaKnown RBP14.03□□□□□ -0.16
SEM1-201ENST00000248566 CAPSQ13938 189 aa14.03□□□□□ -0.16
SEM1-201ENST00000248566 DTHD1Q6ZMT9 781 aa14.03□□□□□ -0.16
SEM1-201ENST00000248566 LRRC55Q6ZSA7 311 aa14.03□□□□□ -0.16
SEM1-201ENST00000248566 RBM23Q86U06 439 aaKnown RBP14.03□□□□□ -0.16
SEM1-201ENST00000248566 C4orf32Q8N8J7 132 aa14.03□□□□□ -0.16
SEM1-201ENST00000248566 SNX29Q8TEQ0 813 aa14.03□□□□□ -0.16
SEM1-201ENST00000248566 PPP2R3CQ969Q6 453 aa14.03□□□□□ -0.16
SEM1-201ENST00000248566 CPB2Q96IY4 423 aa14.03□□□□□ -0.16
SEM1-201ENST00000248566 ZNF558Q96NG5 402 aa14.03□□□□□ -0.16
SEM1-201ENST00000248566 NECAB3Q96P71 396 aaPredicted RBP14.03□□□□□ -0.16
SEM1-201ENST00000248566 GPRC5CQ9NQ84 441 aa14.03□□□□□ -0.16
SEM1-201ENST00000248566 KIAA1024Q9UPX6 916 aa14.03□□□□□ -0.16
SEM1-201ENST00000248566 TCF20Q9UGU0 1960 aaKnown RBP14.02□□□□□ -0.16
SEM1-201ENST00000248566 VPS37CA5D8V6 355 aaPredicted RBP14.02□□□□□ -0.17
SEM1-201ENST00000248566 BMP1P13497 986 aa14.02□□□□□ -0.17
SEM1-201ENST00000248566 ATF7P17544 494 aaPredicted RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms