RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 CUL1Q13616 776 aa11.78□□□□□ -0.52
COPA-201ENST00000241704 SEC23AQ15436 765 aa11.78□□□□□ -0.52
COPA-201ENST00000241704 ANKRD13AQ8IZ07 590 aa11.78□□□□□ -0.52
COPA-201ENST00000241704 ZNF280CQ8ND82 737 aa11.78□□□□□ -0.52
COPA-201ENST00000241704 MAIP1Q8WWC4 291 aa11.78□□□□□ -0.52
COPA-201ENST00000241704 LPAR1Q92633 364 aa11.78□□□□□ -0.52
COPA-201ENST00000241704 DDX27Q96GQ7 796 aaKnown RBP11.78□□□□□ -0.52
COPA-201ENST00000241704 FAM167AQ96KS9 214 aa11.78□□□□□ -0.52
COPA-201ENST00000241704 MIS12Q9H081 205 aa11.78□□□□□ -0.52
COPA-201ENST00000241704 TAF1DQ9H5J8 278 aaPredicted RBP11.78□□□□□ -0.52
COPA-201ENST00000241704 CCL15-CCL14A0A0B4J2E2 113 aa11.78□□□□□ -0.52
COPA-201ENST00000241704 SFI1A8K8P3 1242 aa11.78□□□□□ -0.52
COPA-201ENST00000241704 C19orf81C9J6K1 198 aa11.78□□□□□ -0.52
COPA-201ENST00000241704 K7ERI5 159 aa11.78□□□□□ -0.52
COPA-201ENST00000241704 IPO5O00410 1097 aaKnown RBP11.78□□□□□ -0.52
COPA-201ENST00000241704 KCNK3O14649 394 aa11.78□□□□□ -0.52
COPA-201ENST00000241704 PDHA1P08559 390 aa11.78□□□□□ -0.52
COPA-201ENST00000241704 VEGFAP15692 232 aaPredicted RBP11.78□□□□□ -0.52
COPA-201ENST00000241704 OSTNP61366 133 aa11.78□□□□□ -0.52
COPA-201ENST00000241704 CCL15Q16663 113 aa11.78□□□□□ -0.52
COPA-201ENST00000241704 WLSQ5T9L3 541 aa11.78□□□□□ -0.52
COPA-201ENST00000241704 PARD3BQ8TEW8 1205 aa11.78□□□□□ -0.52
COPA-201ENST00000241704 ANKRD36BP1Q96IX9 119 aa11.78□□□□□ -0.52
COPA-201ENST00000241704 CEP63Q96MT8 703 aa11.78□□□□□ -0.52
COPA-201ENST00000241704 TRIM31Q9BZY9 425 aa11.78□□□□□ -0.52
COPA-201ENST00000241704 NKIRAS1Q9NYS0 192 aa11.78□□□□□ -0.52
COPA-201ENST00000241704 ZFATQ9P243 1243 aa11.78□□□□□ -0.52
COPA-201ENST00000241704 ESYT2A0FGR8 921 aa11.78□□□□□ -0.52
COPA-201ENST00000241704 ESYT3A0FGR9 886 aa11.78□□□□□ -0.52
COPA-201ENST00000241704 POLRMTO00411 1230 aaKnown RBP11.78□□□□□ -0.52
COPA-201ENST00000241704 PTK2Q05397 1052 aa11.78□□□□□ -0.52
COPA-201ENST00000241704 COASYQ13057 564 aa11.78□□□□□ -0.52
COPA-201ENST00000241704 SFR1Q86XK3 245 aa11.78□□□□□ -0.52
COPA-201ENST00000241704 KCNV2Q8TDN2 545 aa11.78□□□□□ -0.52
COPA-201ENST00000241704 DYDC2Q96IM9 177 aa11.78□□□□□ -0.52
COPA-201ENST00000241704 ZDHHC15Q96MV8 337 aa11.78□□□□□ -0.52
COPA-201ENST00000241704 GCNT4Q9P109 453 aa11.78□□□□□ -0.52
COPA-201ENST00000241704 ASB14A6NK59 587 aa11.78□□□□□ -0.52
COPA-201ENST00000241704 P4HBP07237 508 aaKnown RBP11.78□□□□□ -0.52
COPA-201ENST00000241704 MYBL2P10244 700 aa11.78□□□□□ -0.52
COPA-201ENST00000241704 IFNAR2P48551 515 aa11.78□□□□□ -0.52
COPA-201ENST00000241704 ARPP19P56211 112 aa11.78□□□□□ -0.52
COPA-201ENST00000241704 MAGOHP61326 146 aaKnown RBP11.78□□□□□ -0.52
COPA-201ENST00000241704 ERVK-24P63145 666 aa11.78□□□□□ -0.52
COPA-201ENST00000241704 MRPS35P82673 323 aaKnown RBP11.78□□□□□ -0.52
COPA-201ENST00000241704 CEP55Q53EZ4 464 aa11.78□□□□□ -0.52
COPA-201ENST00000241704 LRIG3Q6UXM1 1119 aa11.78□□□□□ -0.52
COPA-201ENST00000241704 PIK3R5Q8WYR1 880 aa11.78□□□□□ -0.52
COPA-201ENST00000241704 MAGOHBQ96A72 148 aaKnown RBP11.78□□□□□ -0.52
COPA-201ENST00000241704 FAM81BQ96LP2 452 aa11.78□□□□□ -0.52
COPA-201ENST00000241704 KDM4CQ9H3R0 1056 aa11.78□□□□□ -0.52
COPA-201ENST00000241704 JMJD4Q9H9V9 463 aa11.78□□□□□ -0.52
COPA-201ENST00000241704 MAD2L2Q9UI95 211 aa11.78□□□□□ -0.52
COPA-201ENST00000241704 KIF13AQ9H1H9 1805 aa11.77□□□□□ -0.52
COPA-201ENST00000241704 TTC26A0AVF1 554 aa11.77□□□□□ -0.52
COPA-201ENST00000241704 POTEFA5A3E0 1075 aa11.77□□□□□ -0.52
COPA-201ENST00000241704 WDR46O15213 610 aaKnown RBP11.77□□□□□ -0.52
COPA-201ENST00000241704 MMEP08473 750 aa11.77□□□□□ -0.52
COPA-201ENST00000241704 POTEIP0CG38 1075 aa11.77□□□□□ -0.52
COPA-201ENST00000241704 ZNF18P17022 549 aa11.77□□□□□ -0.52
COPA-201ENST00000241704 ECE1P42892 770 aa11.77□□□□□ -0.52
COPA-201ENST00000241704 EIF3BP55884 814 aaKnown RBP11.77□□□□□ -0.52
COPA-201ENST00000241704 PPP2R5EQ16537 467 aa11.77□□□□□ -0.52
COPA-201ENST00000241704 POTEGQ6S5H5 508 aa11.77□□□□□ -0.52
COPA-201ENST00000241704 POTEEQ6S8J3 1075 aa11.77□□□□□ -0.52
COPA-201ENST00000241704 C7orf31Q8N865 590 aa11.77□□□□□ -0.52
COPA-201ENST00000241704 TEX13BQ9BXU2 312 aa11.77□□□□□ -0.52
COPA-201ENST00000241704 PCDHA13Q9Y5I0 950 aa11.77□□□□□ -0.52
COPA-201ENST00000241704 CCDC160A6NGH7 325 aa11.77□□□□□ -0.53
COPA-201ENST00000241704 AHCYL1O43865 530 aa11.77□□□□□ -0.53
COPA-201ENST00000241704 GHRP10912 638 aa11.77□□□□□ -0.53
COPA-201ENST00000241704 SFNP31947 248 aa11.77□□□□□ -0.53
COPA-201ENST00000241704 PIK3CAP42336 1068 aa11.77□□□□□ -0.53
COPA-201ENST00000241704 NFRKBQ6P4R8 1299 aa11.77□□□□□ -0.53
COPA-201ENST00000241704 PADI6Q6TGC4 694 aa11.77□□□□□ -0.53
COPA-201ENST00000241704 LRP10Q7Z4F1 713 aa11.77□□□□□ -0.53
COPA-201ENST00000241704 ZNF513Q8N8E2 541 aaPredicted RBP11.77□□□□□ -0.53
COPA-201ENST00000241704 RAB17Q9H0T7 212 aa11.77□□□□□ -0.53
COPA-201ENST00000241704 PRR12Q9ULL5 1215 aa11.77□□□□□ -0.53
COPA-201ENST00000241704 SKIP12755 728 aa11.77□□□□□ -0.53
COPA-201ENST00000241704 POLR2BP30876 1174 aaKnown RBP11.77□□□□□ -0.53
COPA-201ENST00000241704 MXI1P50539 228 aa11.77□□□□□ -0.53
COPA-201ENST00000241704 GABPAQ06546 454 aa11.77□□□□□ -0.53
COPA-201ENST00000241704 SCYL2Q6P3W7 929 aa11.77□□□□□ -0.53
COPA-201ENST00000241704 ELOA2Q8IYF1 753 aaPredicted RBP11.77□□□□□ -0.53
COPA-201ENST00000241704 MCPH1Q8NEM0 835 aa11.77□□□□□ -0.53
COPA-201ENST00000241704 TEKT4Q8WW24 435 aa11.77□□□□□ -0.53
COPA-201ENST00000241704 CAVIN3Q969G5 261 aa11.77□□□□□ -0.53
COPA-201ENST00000241704 ITFG2Q969R8 447 aa11.77□□□□□ -0.53
COPA-201ENST00000241704 FGD4Q96M96 766 aa11.77□□□□□ -0.53
COPA-201ENST00000241704 SH3GL2Q99962 352 aa11.77□□□□□ -0.53
COPA-201ENST00000241704 MOV10L1Q9BXT6 1211 aaKnown RBP11.77□□□□□ -0.53
COPA-201ENST00000241704 TRIM9Q9C026 710 aa11.77□□□□□ -0.53
COPA-201ENST00000241704 CCDC189A1A4V9 331 aa11.76□□□□□ -0.53
COPA-201ENST00000241704 FAM170AA1A519 330 aa11.76□□□□□ -0.53
COPA-201ENST00000241704 HOXA10P31260 410 aaPredicted RBP11.76□□□□□ -0.53
COPA-201ENST00000241704 QARSP47897 775 aaKnown RBP11.76□□□□□ -0.53
COPA-201ENST00000241704 PEX3P56589 373 aa11.76□□□□□ -0.53
COPA-201ENST00000241704 ELMSAN1Q6PJG2 1045 aa11.76□□□□□ -0.53
COPA-201ENST00000241704 CCDC105Q8IYK2 499 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms