RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 SPATS2LQ9NUQ6 558 aaKnown RBP14.03□□□□□ -0.16
NEK9-201ENST00000238616 MAD2L2Q9UI95 211 aa14.03□□□□□ -0.16
NEK9-201ENST00000238616 MAST1Q9Y2H9 1570 aa14.03□□□□□ -0.16
NEK9-201ENST00000238616 POLR3AO14802 1390 aaPredicted RBP14.03□□□□□ -0.16
NEK9-201ENST00000238616 MLH3Q9UHC1 1453 aa14.03□□□□□ -0.16
NEK9-201ENST00000238616 KCNA2P16389 499 aa14.03□□□□□ -0.16
NEK9-201ENST00000238616 MRPS15P82914 257 aaKnown RBP14.03□□□□□ -0.16
NEK9-201ENST00000238616 SLFN12LQ6IEE8 588 aa14.03□□□□□ -0.16
NEK9-201ENST00000238616 ICA1LQ8NDH6 482 aa14.03□□□□□ -0.16
NEK9-201ENST00000238616 APPL2Q8NEU8 664 aa14.03□□□□□ -0.16
NEK9-201ENST00000238616 FAM213AQ9BRX8 229 aa14.03□□□□□ -0.16
NEK9-201ENST00000238616 TSSK1BQ9BXA7 367 aa14.03□□□□□ -0.16
NEK9-201ENST00000238616 NOVA2Q9UNW9 492 aaKnown RBP14.03□□□□□ -0.16
NEK9-201ENST00000238616 HMBSP08397 361 aa14.03□□□□□ -0.16
NEK9-201ENST00000238616 COPB2P35606 906 aa14.03□□□□□ -0.16
NEK9-201ENST00000238616 ST8SIA6P61647 398 aa14.03□□□□□ -0.16
NEK9-201ENST00000238616 MAP3K10Q02779 954 aa14.03□□□□□ -0.16
NEK9-201ENST00000238616 TWF1Q12792 350 aa14.03□□□□□ -0.16
NEK9-201ENST00000238616 GPS1Q13098 491 aa14.03□□□□□ -0.16
NEK9-201ENST00000238616 FOPNLQ96NB1 174 aa14.03□□□□□ -0.16
NEK9-201ENST00000238616 ZNF235Q14590 738 aa14.03□□□□□ -0.16
NEK9-201ENST00000238616 FAM83BQ5T0W9 1011 aa14.03□□□□□ -0.16
NEK9-201ENST00000238616 ZNF658Q5TYW1 1059 aaPredicted RBP14.03□□□□□ -0.16
NEK9-201ENST00000238616 KIAA2013Q8IYS2 634 aa14.03□□□□□ -0.16
NEK9-201ENST00000238616 AK8Q96MA6 479 aa14.03□□□□□ -0.16
NEK9-201ENST00000238616 DDX28Q9NUL7 540 aaKnown RBP14.03□□□□□ -0.16
NEK9-201ENST00000238616 MID2Q9UJV3 735 aa14.03□□□□□ -0.16
NEK9-201ENST00000238616 MAN2A1Q16706 1144 aa14.02□□□□□ -0.16
NEK9-201ENST00000238616 ALS2CLQ60I27 953 aa14.02□□□□□ -0.16
NEK9-201ENST00000238616 ZNF772Q68DY9 489 aaPredicted RBP14.02□□□□□ -0.16
NEK9-201ENST00000238616 FGD2Q7Z6J4 655 aa14.02□□□□□ -0.16
NEK9-201ENST00000238616 TBC1D1Q86TI0 1168 aaPredicted RBP14.02□□□□□ -0.16
NEK9-201ENST00000238616 C10orf53Q8N6V4 93 aa14.02□□□□□ -0.16
NEK9-201ENST00000238616 FAM47DPA6NHR8 397 aa14.02□□□□□ -0.16
NEK9-201ENST00000238616 MYO1GB0I1T2 1018 aa14.02□□□□□ -0.16
NEK9-201ENST00000238616 WDR47O94967 919 aa14.02□□□□□ -0.16
NEK9-201ENST00000238616 SPARCL1Q14515 664 aa14.02□□□□□ -0.16
NEK9-201ENST00000238616 WDR75Q8IWA0 830 aaKnown RBP14.02□□□□□ -0.16
NEK9-201ENST00000238616 TRIM8Q9BZR9 551 aa14.02□□□□□ -0.16
NEK9-201ENST00000238616 HAUS4Q9H6D7 363 aa14.02□□□□□ -0.16
NEK9-201ENST00000238616 SLC25A13Q9UJS0 675 aa14.02□□□□□ -0.16
NEK9-201ENST00000238616 MDM2Q00987 491 aaPredicted RBP14.02□□□□□ -0.16
NEK9-201ENST00000238616 SDE2Q6IQ49 451 aa14.02□□□□□ -0.16
NEK9-201ENST00000238616 ARL8AQ96BM9 186 aa14.02□□□□□ -0.16
NEK9-201ENST00000238616 ACAP3Q96P50 834 aa14.02□□□□□ -0.16
NEK9-201ENST00000238616 EMILIN3Q9NT22 766 aa14.02□□□□□ -0.16
NEK9-201ENST00000238616 LEMD3Q9Y2U8 911 aa14.02□□□□□ -0.16
NEK9-201ENST00000238616 SUPT3HO75486 399 aa14.02□□□□□ -0.17
NEK9-201ENST00000238616 HEATR6Q6AI08 1181 aaKnown RBP14.02□□□□□ -0.17
NEK9-201ENST00000238616 TUBB6Q9BUF5 446 aa14.02□□□□□ -0.17
NEK9-201ENST00000238616 SMARCAD1Q9H4L7 1026 aa14.02□□□□□ -0.17
NEK9-201ENST00000238616 EML4Q9HC35 981 aaKnown RBP14.02□□□□□ -0.17
NEK9-201ENST00000238616 DTNAQ9Y4J8 743 aa14.02□□□□□ -0.17
NEK9-201ENST00000238616 SYT2Q8N9I0 419 aaPredicted RBP14.02□□□□□ -0.17
NEK9-201ENST00000238616 EXOC4Q96A65 974 aa14.02□□□□□ -0.17
NEK9-201ENST00000238616 HES6Q96HZ4 224 aa14.02□□□□□ -0.17
NEK9-201ENST00000238616 ASAP1Q9ULH1 1129 aa14.02□□□□□ -0.17
NEK9-201ENST00000238616 GABPB1Q06547 395 aaPredicted RBP14.02□□□□□ -0.17
NEK9-201ENST00000238616 TBC1D19Q8N5T2 526 aa14.02□□□□□ -0.17
NEK9-201ENST00000238616 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.02□□□□□ -0.17
NEK9-201ENST00000238616 PGBD4Q96DM1 585 aa14.02□□□□□ -0.17
NEK9-201ENST00000238616 RAVER2Q9HCJ3 691 aaKnown RBP14.02□□□□□ -0.17
NEK9-201ENST00000238616 SOAT1P35610 550 aa14.02□□□□□ -0.17
NEK9-201ENST00000238616 ERFP50548 548 aa14.02□□□□□ -0.17
NEK9-201ENST00000238616 EPHB4P54760 987 aa14.02□□□□□ -0.17
NEK9-201ENST00000238616 ALFQ53S48 1182 aa14.02□□□□□ -0.17
NEK9-201ENST00000238616 TRIM48Q8IWZ4 208 aa14.02□□□□□ -0.17
NEK9-201ENST00000238616 GTF2A1LQ9UNN4 478 aa14.02□□□□□ -0.17
NEK9-201ENST00000238616 URB1O60287 2271 aaKnown RBP14.01□□□□□ -0.17
NEK9-201ENST00000238616 M0QYV0 167 aa14.01□□□□□ -0.17
NEK9-201ENST00000238616 EIF4A3P38919 411 aaKnown RBP14.01□□□□□ -0.17
NEK9-201ENST00000238616 KIZQ2M2Z5 673 aa14.01□□□□□ -0.17
NEK9-201ENST00000238616 BEND6Q5SZJ8 279 aaPredicted RBP14.01□□□□□ -0.17
NEK9-201ENST00000238616 ENAHQ8N8S7 591 aaPredicted RBP14.01□□□□□ -0.17
NEK9-201ENST00000238616 ASNSD1Q9NWL6 643 aa14.01□□□□□ -0.17
NEK9-201ENST00000238616 IPO5O00410 1097 aaKnown RBP14.01□□□□□ -0.17
NEK9-201ENST00000238616 ATP9BO43861 1147 aa14.01□□□□□ -0.17
NEK9-201ENST00000238616 PYGBP11216 843 aa14.01□□□□□ -0.17
NEK9-201ENST00000238616 MED21Q13503 144 aa14.01□□□□□ -0.17
NEK9-201ENST00000238616 DHTKD1Q96HY7 919 aaPredicted RBP14.01□□□□□ -0.17
NEK9-201ENST00000238616 MAGEF1Q9HAY2 307 aa14.01□□□□□ -0.17
NEK9-201ENST00000238616 ADAM22Q9P0K1 906 aa14.01□□□□□ -0.17
NEK9-201ENST00000238616 FGGP02679 453 aa14.01□□□□□ -0.17
NEK9-201ENST00000238616 NR5A1Q13285 461 aa14.01□□□□□ -0.17
NEK9-201ENST00000238616 TOGARAM2Q6ZUX3 1019 aa14.01□□□□□ -0.17
NEK9-201ENST00000238616 ARHGEF25Q86VW2 580 aa14.01□□□□□ -0.17
NEK9-201ENST00000238616 AGAP3Q96P47 875 aa14.01□□□□□ -0.17
NEK9-201ENST00000238616 ZNF556Q9HAH1 456 aa14.01□□□□□ -0.17
NEK9-201ENST00000238616 COPG1Q9Y678 874 aaKnown RBP14.01□□□□□ -0.17
NEK9-201ENST00000238616 RNF123Q5XPI4 1314 aa14.01□□□□□ -0.17
NEK9-201ENST00000238616 CYTH3O43739 400 aa14.01□□□□□ -0.17
NEK9-201ENST00000238616 GH2P01242 217 aa14.01□□□□□ -0.17
NEK9-201ENST00000238616 RALAP11233 206 aa14.01□□□□□ -0.17
NEK9-201ENST00000238616 PCSK7Q16549 785 aa14.01□□□□□ -0.17
NEK9-201ENST00000238616 SEC31BQ9NQW1 1179 aa14.01□□□□□ -0.17
NEK9-201ENST00000238616 H2AFY2Q9P0M6 372 aaPredicted RBP14.01□□□□□ -0.17
NEK9-201ENST00000238616 NRBP1Q9UHY1 535 aa14.01□□□□□ -0.17
NEK9-201ENST00000238616 BLMP54132 1417 aaPredicted RBP14.01□□□□□ -0.17
NEK9-201ENST00000238616 IKBKBO14920 756 aa14.01□□□□□ -0.17
NEK9-201ENST00000238616 LZTS3O60299 673 aaPredicted RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms