RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 AUHQ13825 339 aaKnown RBP16.74■□□□□ 0.27
DDX55-201ENST00000238146 AMIGO3Q86WK7 504 aa16.74■□□□□ 0.27
DDX55-201ENST00000238146 MTRF1LQ9UGC7 380 aaKnown RBP16.74■□□□□ 0.27
DDX55-201ENST00000238146 SERPINB13Q9UIV8 391 aa16.74■□□□□ 0.27
DDX55-201ENST00000238146 DBR1Q9UK59 544 aaKnown RBP16.74■□□□□ 0.27
DDX55-201ENST00000238146 SYNGAP1Q96PV0 1343 aa16.74■□□□□ 0.27
DDX55-201ENST00000238146 PODXLO00592 558 aa16.74■□□□□ 0.27
DDX55-201ENST00000238146 TBX3O15119 743 aa16.74■□□□□ 0.27
DDX55-201ENST00000238146 SNX3O60493 162 aa16.74■□□□□ 0.27
DDX55-201ENST00000238146 NMT1P30419 496 aaKnown RBP16.74■□□□□ 0.27
DDX55-201ENST00000238146 SHMT1P34896 483 aa16.74■□□□□ 0.27
DDX55-201ENST00000238146 BARGINQ6ZT62 677 aa16.74■□□□□ 0.27
DDX55-201ENST00000238146 FAM86B1E9PN63 330 aa16.73■□□□□ 0.27
DDX55-201ENST00000238146 RASGRF2O14827 1237 aa16.73■□□□□ 0.27
DDX55-201ENST00000238146 FAM86B2P0C5J1 330 aa16.73■□□□□ 0.27
DDX55-201ENST00000238146 CTNNA2P26232 953 aa16.73■□□□□ 0.27
DDX55-201ENST00000238146 GBP2P32456 591 aaPredicted RBP16.73■□□□□ 0.27
DDX55-201ENST00000238146 ZNF268Q14587 947 aaPredicted RBP16.73■□□□□ 0.27
DDX55-201ENST00000238146 COG2Q14746 738 aa16.73■□□□□ 0.27
DDX55-201ENST00000238146 Q4G0T1 1027 aa16.73■□□□□ 0.27
DDX55-201ENST00000238146 CCDC38Q502W7 563 aa16.73■□□□□ 0.27
DDX55-201ENST00000238146 ZC2HC1CQ53FD0 456 aaPredicted RBP16.73■□□□□ 0.27
DDX55-201ENST00000238146 NSRP1Q9H0G5 558 aaKnown RBP16.73■□□□□ 0.27
DDX55-201ENST00000238146 INTS2Q9H0H0 1204 aaKnown RBP16.73■□□□□ 0.27
DDX55-201ENST00000238146 A0A1B0GUA9 196 aa16.73■□□□□ 0.27
DDX55-201ENST00000238146 UBOX5O94941 541 aa16.73■□□□□ 0.27
DDX55-201ENST00000238146 RARGP13631 454 aa16.73■□□□□ 0.27
DDX55-201ENST00000238146 HSPA6P17066 643 aa16.73■□□□□ 0.27
DDX55-201ENST00000238146 GBP1P32455 592 aa16.73■□□□□ 0.27
DDX55-201ENST00000238146 HADHBP55084 474 aaKnown RBP16.73■□□□□ 0.27
DDX55-201ENST00000238146 AP3B2Q13367 1082 aa16.73■□□□□ 0.27
DDX55-201ENST00000238146 ARHGAP44Q17R89 818 aa16.73■□□□□ 0.27
DDX55-201ENST00000238146 RC3H1Q5TC82 1133 aaKnown RBP16.73■□□□□ 0.27
DDX55-201ENST00000238146 CCDC137Q6PK04 289 aaKnown RBP16.73■□□□□ 0.27
DDX55-201ENST00000238146 RHOT2Q8IXI1 618 aa16.73■□□□□ 0.27
DDX55-201ENST00000238146 KIRREL3Q8IZU9 778 aa16.73■□□□□ 0.27
DDX55-201ENST00000238146 HOOK2Q96ED9 719 aa16.73■□□□□ 0.27
DDX55-201ENST00000238146 CCDC113Q9H0I3 377 aa16.73■□□□□ 0.27
DDX55-201ENST00000238146 APEX2Q9UBZ4 518 aa16.73■□□□□ 0.27
DDX55-201ENST00000238146 PARP2Q9UGN5 583 aa16.73■□□□□ 0.27
DDX55-201ENST00000238146 RABGAP1Q9Y3P9 1069 aa16.73■□□□□ 0.27
DDX55-201ENST00000238146 L3MBTL1Q9Y468 752 aa16.73■□□□□ 0.27
DDX55-201ENST00000238146 CD2APQ9Y5K6 639 aa16.73■□□□□ 0.27
DDX55-201ENST00000238146 MIF4GDA9UHW6 222 aaKnown RBP16.73■□□□□ 0.27
DDX55-201ENST00000238146 UBAP1LF5GYI3 381 aa16.73■□□□□ 0.27
DDX55-201ENST00000238146 MPHOSPH10O00566 681 aaKnown RBP16.73■□□□□ 0.27
DDX55-201ENST00000238146 ECM2O94769 699 aaPredicted RBP16.73■□□□□ 0.27
DDX55-201ENST00000238146 EYA4O95677 639 aa16.73■□□□□ 0.27
DDX55-201ENST00000238146 OAS1P00973 400 aaKnown RBP16.73■□□□□ 0.27
DDX55-201ENST00000238146 TRIM49P0CI25 452 aa16.73■□□□□ 0.27
DDX55-201ENST00000238146 TRIM49CP0CI26 452 aa16.73■□□□□ 0.27
DDX55-201ENST00000238146 ALAS1P13196 640 aa16.73■□□□□ 0.27
DDX55-201ENST00000238146 PDE6CP51160 858 aa16.73■□□□□ 0.27
DDX55-201ENST00000238146 CTTNQ14247 550 aaKnown RBP16.73■□□□□ 0.27
DDX55-201ENST00000238146 RINT1Q6NUQ1 792 aa16.73■□□□□ 0.27
DDX55-201ENST00000238146 EXOC3L1Q86VI1 746 aa16.73■□□□□ 0.27
DDX55-201ENST00000238146 KSR1Q8IVT5 923 aa16.73■□□□□ 0.27
DDX55-201ENST00000238146 STMN4Q9H169 189 aaPredicted RBP16.73■□□□□ 0.27
DDX55-201ENST00000238146 RGL1Q9NZL6 768 aa16.73■□□□□ 0.27
DDX55-201ENST00000238146 GGT7Q9UJ14 662 aa16.73■□□□□ 0.27
DDX55-201ENST00000238146 ANKRD63C9JTQ0 380 aa16.72■□□□□ 0.27
DDX55-201ENST00000238146 FOXN3O00409 490 aaPredicted RBP16.72■□□□□ 0.27
DDX55-201ENST00000238146 EIF3DO15371 548 aaKnown RBP eCLIP16.72■□□□□ 0.27
DDX55-201ENST00000238146 RARAP10276 462 aa16.72■□□□□ 0.27
DDX55-201ENST00000238146 NCALDP61601 193 aa16.72■□□□□ 0.27
DDX55-201ENST00000238146 KCNJ2P63252 427 aa16.72■□□□□ 0.27
DDX55-201ENST00000238146 MYO1EQ12965 1108 aa16.72■□□□□ 0.27
DDX55-201ENST00000238146 KIF22Q14807 665 aa16.72■□□□□ 0.27
DDX55-201ENST00000238146 SLMAPQ14BN4 828 aa16.72■□□□□ 0.27
DDX55-201ENST00000238146 PTF1AQ7RTS3 328 aa16.72■□□□□ 0.27
DDX55-201ENST00000238146 UBL4BQ8N7F7 174 aa16.72■□□□□ 0.27
DDX55-201ENST00000238146 NSMCE1Q8WV22 266 aa16.72■□□□□ 0.27
DDX55-201ENST00000238146 FAM212AQ96EL1 285 aa16.72■□□□□ 0.27
DDX55-201ENST00000238146 MKNK1Q9BUB5 465 aa16.72■□□□□ 0.27
DDX55-201ENST00000238146 CTTNBP2NLQ9P2B4 639 aa16.72■□□□□ 0.27
DDX55-201ENST00000238146 LRRN2O75325 713 aa16.72■□□□□ 0.27
DDX55-201ENST00000238146 SLURP2P0DP57 97 aa16.72■□□□□ 0.27
DDX55-201ENST00000238146 NQO1P15559 274 aaKnown RBP16.72■□□□□ 0.27
DDX55-201ENST00000238146 GAP43P17677 238 aa16.72■□□□□ 0.27
DDX55-201ENST00000238146 NFIL3Q16649 462 aa16.72■□□□□ 0.27
DDX55-201ENST00000238146 MFSD5Q6N075 450 aa16.72■□□□□ 0.27
DDX55-201ENST00000238146 PHLDB3Q6NSJ2 640 aa16.72■□□□□ 0.27
DDX55-201ENST00000238146 C11orf63Q6NUN7 778 aa16.72■□□□□ 0.27
DDX55-201ENST00000238146 PAXIP1Q6ZW49 1069 aaPredicted RBP16.72■□□□□ 0.27
DDX55-201ENST00000238146 TAOK1Q7L7X3 1001 aa16.72■□□□□ 0.27
DDX55-201ENST00000238146 MYCT1Q8N699 235 aa16.72■□□□□ 0.27
DDX55-201ENST00000238146 TBC1D22AQ8WUA7 517 aa16.72■□□□□ 0.27
DDX55-201ENST00000238146 SLC20A1Q8WUM9 679 aa16.72■□□□□ 0.27
DDX55-201ENST00000238146 ARHGEF1Q92888 912 aaKnown RBP16.72■□□□□ 0.27
DDX55-201ENST00000238146 FAM20AQ96MK3 541 aa16.72■□□□□ 0.27
DDX55-201ENST00000238146 AGPAT1Q99943 283 aa16.72■□□□□ 0.27
DDX55-201ENST00000238146 EIF2AK1Q9BQI3 630 aaKnown RBP16.72■□□□□ 0.27
DDX55-201ENST00000238146 ZSWIM1Q9BR11 485 aa16.72■□□□□ 0.27
DDX55-201ENST00000238146 VAV3Q9UKW4 847 aa16.72■□□□□ 0.27
DDX55-201ENST00000238146 ZNF831Q5JPB2 1677 aa16.71■□□□□ 0.27
DDX55-201ENST00000238146 TMEM110-MUSTN1A8MSY1 372 aa16.71■□□□□ 0.27
DDX55-201ENST00000238146 EML1O00423 815 aa16.71■□□□□ 0.27
DDX55-201ENST00000238146 MSH4O15457 936 aa16.71■□□□□ 0.27
DDX55-201ENST00000238146 RAD21O60216 631 aa16.71■□□□□ 0.27
DDX55-201ENST00000238146 ATP2B4P23634 1241 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms