RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 ELOA2Q8IYF1 753 aaPredicted RBP12.2□□□□□ -0.46
TNFAIP3-201ENST00000237289 MSTO1Q9BUK6 570 aa12.2□□□□□ -0.46
TNFAIP3-201ENST00000237289 KIFC3Q9BVG8 833 aa12.2□□□□□ -0.46
TNFAIP3-201ENST00000237289 CLIC2O15247 247 aa12.19□□□□□ -0.46
TNFAIP3-201ENST00000237289 CBFA2T2O43439 604 aa12.19□□□□□ -0.46
TNFAIP3-201ENST00000237289 ADAMTS4O75173 837 aa12.19□□□□□ -0.46
TNFAIP3-201ENST00000237289 ZNF200P98182 395 aaPredicted RBP12.19□□□□□ -0.46
TNFAIP3-201ENST00000237289 SRGAP1Q7Z6B7 1085 aa12.19□□□□□ -0.46
TNFAIP3-201ENST00000237289 ARMC5Q96C12 935 aa12.19□□□□□ -0.46
TNFAIP3-201ENST00000237289 PCIF1Q9H4Z3 704 aa12.19□□□□□ -0.46
TNFAIP3-201ENST00000237289 TRMT13Q9NUP7 481 aaKnown RBP12.19□□□□□ -0.46
TNFAIP3-201ENST00000237289 ACTN1P12814 892 aa12.19□□□□□ -0.46
TNFAIP3-201ENST00000237289 TLE2Q04725 743 aa12.19□□□□□ -0.46
TNFAIP3-201ENST00000237289 DCAF17Q5H9S7 520 aaPredicted RBP12.19□□□□□ -0.46
TNFAIP3-201ENST00000237289 THNSL1Q8IYQ7 743 aa12.19□□□□□ -0.46
TNFAIP3-201ENST00000237289 P2RX5Q93086 422 aa12.19□□□□□ -0.46
TNFAIP3-201ENST00000237289 HPS3Q969F9 1004 aa12.19□□□□□ -0.46
TNFAIP3-201ENST00000237289 FAM193BQ96PV7 902 aaPredicted RBP12.19□□□□□ -0.46
TNFAIP3-201ENST00000237289 HIPK3Q9H422 1215 aa12.19□□□□□ -0.46
TNFAIP3-201ENST00000237289 WRAP73Q9P2S5 460 aaPredicted RBP12.19□□□□□ -0.46
TNFAIP3-201ENST00000237289 TELO2Q9Y4R8 837 aa12.19□□□□□ -0.46
TNFAIP3-201ENST00000237289 FAM237AA0A1B0GTK4 181 aa12.19□□□□□ -0.46
TNFAIP3-201ENST00000237289 RHOBTB3O94955 611 aa12.19□□□□□ -0.46
TNFAIP3-201ENST00000237289 GJA8P48165 433 aa12.19□□□□□ -0.46
TNFAIP3-201ENST00000237289 OSTNP61366 133 aa12.19□□□□□ -0.46
TNFAIP3-201ENST00000237289 MRPS6P82932 125 aaKnown RBP12.19□□□□□ -0.46
TNFAIP3-201ENST00000237289 KNOP1Q1ED39 458 aaKnown RBP12.19□□□□□ -0.46
TNFAIP3-201ENST00000237289 KSR1Q8IVT5 923 aa12.19□□□□□ -0.46
TNFAIP3-201ENST00000237289 SEPT8Q92599 483 aa12.19□□□□□ -0.46
TNFAIP3-201ENST00000237289 ZBED2Q9BTP6 218 aa12.19□□□□□ -0.46
TNFAIP3-201ENST00000237289 SRRTQ9BXP5 876 aaKnown RBP12.19□□□□□ -0.46
TNFAIP3-201ENST00000237289 IMPG2Q9BZV3 1241 aa12.19□□□□□ -0.46
TNFAIP3-201ENST00000237289 TRPV6Q9H1D0 765 aa12.19□□□□□ -0.46
TNFAIP3-201ENST00000237289 CDY2AQ9Y6F7 541 aa12.19□□□□□ -0.46
TNFAIP3-201ENST00000237289 PTPRFP10586 1907 aa12.19□□□□□ -0.46
TNFAIP3-201ENST00000237289 GHRP10912 638 aa12.19□□□□□ -0.46
TNFAIP3-201ENST00000237289 NR2F2P24468 414 aa12.19□□□□□ -0.46
TNFAIP3-201ENST00000237289 KCNJ6P48051 423 aa12.19□□□□□ -0.46
TNFAIP3-201ENST00000237289 BIRC3Q13489 604 aa12.19□□□□□ -0.46
TNFAIP3-201ENST00000237289 DEFB128Q7Z7B8 93 aa12.19□□□□□ -0.46
TNFAIP3-201ENST00000237289 CAGE1Q8TC20 777 aa12.19□□□□□ -0.46
TNFAIP3-201ENST00000237289 DHX33Q9H6R0 707 aaKnown RBP12.19□□□□□ -0.46
TNFAIP3-201ENST00000237289 SMCHD1A6NHR9 2005 aa12.18□□□□□ -0.46
TNFAIP3-201ENST00000237289 LDHAP00338 332 aaKnown RBP12.18□□□□□ -0.46
TNFAIP3-201ENST00000237289 TNNI1P19237 187 aa12.18□□□□□ -0.46
TNFAIP3-201ENST00000237289 TRIM21P19474 475 aaKnown RBP12.18□□□□□ -0.46
TNFAIP3-201ENST00000237289 CELF4Q9BZC1 486 aaKnown RBP12.18□□□□□ -0.46
TNFAIP3-201ENST00000237289 IGKV6D-21A0A0A0MT36 114 aa12.18□□□□□ -0.46
TNFAIP3-201ENST00000237289 CCNE1P24864 410 aa12.18□□□□□ -0.46
TNFAIP3-201ENST00000237289 CCL23P55773 120 aa12.18□□□□□ -0.46
TNFAIP3-201ENST00000237289 RTP1P59025 263 aa12.18□□□□□ -0.46
TNFAIP3-201ENST00000237289 FKBP3Q00688 224 aaKnown RBP12.18□□□□□ -0.46
TNFAIP3-201ENST00000237289 PTK7Q13308 1070 aa12.18□□□□□ -0.46
TNFAIP3-201ENST00000237289 ZC2HC1CQ53FD0 456 aaPredicted RBP12.18□□□□□ -0.46
TNFAIP3-201ENST00000237289 GUF1Q8N442 669 aaKnown RBP12.18□□□□□ -0.46
TNFAIP3-201ENST00000237289 HVCN1Q96D96 273 aa12.18□□□□□ -0.46
TNFAIP3-201ENST00000237289 DNAI2Q9GZS0 605 aa12.18□□□□□ -0.46
TNFAIP3-201ENST00000237289 PHF24Q9UPV7 400 aa12.18□□□□□ -0.46
TNFAIP3-201ENST00000237289 N4BP3O15049 544 aa12.18□□□□□ -0.46
TNFAIP3-201ENST00000237289 ADCY6O43306 1168 aa12.18□□□□□ -0.46
TNFAIP3-201ENST00000237289 GNA14O95837 355 aa12.18□□□□□ -0.46
TNFAIP3-201ENST00000237289 GDF6Q6KF10 455 aaPredicted RBP12.18□□□□□ -0.46
TNFAIP3-201ENST00000237289 NOTUMQ6P988 496 aa12.18□□□□□ -0.46
TNFAIP3-201ENST00000237289 PPP4R3CPQ6ZMV5 832 aa12.18□□□□□ -0.46
TNFAIP3-201ENST00000237289 TMEM199Q8N511 208 aa12.18□□□□□ -0.46
TNFAIP3-201ENST00000237289 KLHDC9Q8NEP7 349 aa12.18□□□□□ -0.46
TNFAIP3-201ENST00000237289 SPIRE2Q8WWL2 714 aa12.18□□□□□ -0.46
TNFAIP3-201ENST00000237289 NFE2L3Q9Y4A8 694 aa12.18□□□□□ -0.46
TNFAIP3-201ENST00000237289 CASP8AP2Q9UKL3 1982 aa12.18□□□□□ -0.46
TNFAIP3-201ENST00000237289 CSDE1O75534 798 aaKnown RBP12.17□□□□□ -0.46
TNFAIP3-201ENST00000237289 STK4Q13043 487 aa12.17□□□□□ -0.46
TNFAIP3-201ENST00000237289 RPUSD2Q8IZ73 545 aaKnown RBP12.17□□□□□ -0.46
TNFAIP3-201ENST00000237289 RPF1Q9H9Y2 349 aaKnown RBP12.17□□□□□ -0.46
TNFAIP3-201ENST00000237289 TOPORSQ9NS56 1045 aaPredicted RBP12.17□□□□□ -0.46
TNFAIP3-201ENST00000237289 OGDHLQ9ULD0 1010 aa12.17□□□□□ -0.46
TNFAIP3-201ENST00000237289 MYBP10242 640 aa12.17□□□□□ -0.46
TNFAIP3-201ENST00000237289 GLRA2P23416 452 aa12.17□□□□□ -0.46
TNFAIP3-201ENST00000237289 EIF4BP23588 611 aaKnown RBP12.17□□□□□ -0.46
TNFAIP3-201ENST00000237289 ERCC5P28715 1186 aaPredicted RBP12.17□□□□□ -0.46
TNFAIP3-201ENST00000237289 GSE1Q14687 1217 aa12.17□□□□□ -0.46
TNFAIP3-201ENST00000237289 ATF7IP2Q5U623 682 aa12.17□□□□□ -0.46
TNFAIP3-201ENST00000237289 B3GNT9Q6UX72 402 aa12.17□□□□□ -0.46
TNFAIP3-201ENST00000237289 CTAGE1Q96RT6 745 aa12.17□□□□□ -0.46
TNFAIP3-201ENST00000237289 PAK6Q9NQU5 681 aaPredicted RBP12.17□□□□□ -0.46
TNFAIP3-201ENST00000237289 TYW1Q9NV66 732 aaKnown RBP12.17□□□□□ -0.46
TNFAIP3-201ENST00000237289 TBX20Q9UMR3 447 aa12.17□□□□□ -0.46
TNFAIP3-201ENST00000237289 XPOTO43592 962 aaKnown RBP12.17□□□□□ -0.46
TNFAIP3-201ENST00000237289 C22orf31O95567 290 aa12.17□□□□□ -0.46
TNFAIP3-201ENST00000237289 PRCPP42785 496 aa12.17□□□□□ -0.46
TNFAIP3-201ENST00000237289 RNASELQ05823 741 aaKnown RBP12.17□□□□□ -0.46
TNFAIP3-201ENST00000237289 TRPC3Q13507 836 aa12.17□□□□□ -0.46
TNFAIP3-201ENST00000237289 DPCR1Q3MIW9 517 aa12.17□□□□□ -0.46
TNFAIP3-201ENST00000237289 ASAP3Q8TDY4 903 aa12.17□□□□□ -0.46
TNFAIP3-201ENST00000237289 CCDC127Q96BQ5 260 aa12.17□□□□□ -0.46
TNFAIP3-201ENST00000237289 TARS2Q9BW92 718 aaKnown RBP12.17□□□□□ -0.46
TNFAIP3-201ENST00000237289 COL11A1P12107 1806 aaPredicted RBP12.17□□□□□ -0.46
TNFAIP3-201ENST00000237289 EIF3DO15371 548 aaKnown RBP eCLIP12.17□□□□□ -0.46
TNFAIP3-201ENST00000237289 CRYBB1P53674 252 aaPredicted RBP12.17□□□□□ -0.46
TNFAIP3-201ENST00000237289 LRRC63Q05C16 580 aa12.17□□□□□ -0.46
TNFAIP3-201ENST00000237289 LHX8Q68G74 356 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms