RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.7□□□□□ -0.54
CDCA3-201ENST00000229265 UMODL1Q5DID0 1318 aa11.69□□□□□ -0.54
CDCA3-201ENST00000229265 SYNGAP1Q96PV0 1343 aa11.69□□□□□ -0.54
CDCA3-201ENST00000229265 UNC80Q8N2C7 3258 aa11.69□□□□□ -0.54
CDCA3-201ENST00000229265 MYH7BA7E2Y1 1941 aa11.69□□□□□ -0.54
CDCA3-201ENST00000229265 SSU72P8A0A1W2PR75 194 aa11.69□□□□□ -0.54
CDCA3-201ENST00000229265 USP27XA6NNY8 438 aa11.69□□□□□ -0.54
CDCA3-201ENST00000229265 SPATA31C2B4DYI2 1134 aa11.69□□□□□ -0.54
CDCA3-201ENST00000229265 RIOK3O14730 519 aaKnown RBP11.69□□□□□ -0.54
CDCA3-201ENST00000229265 PMM2O15305 246 aa11.69□□□□□ -0.54
CDCA3-201ENST00000229265 KIF5CO60282 957 aa11.69□□□□□ -0.54
CDCA3-201ENST00000229265 NDUFA10O95299 355 aa11.69□□□□□ -0.54
CDCA3-201ENST00000229265 LCA5LO95447 670 aa11.69□□□□□ -0.54
CDCA3-201ENST00000229265 PSMC2P35998 433 aaKnown RBP11.69□□□□□ -0.54
CDCA3-201ENST00000229265 TLE2Q04725 743 aa11.69□□□□□ -0.54
CDCA3-201ENST00000229265 CTTNQ14247 550 aaKnown RBP11.69□□□□□ -0.54
CDCA3-201ENST00000229265 PPP2R5AQ15172 486 aa11.69□□□□□ -0.54
CDCA3-201ENST00000229265 STXBP2Q15833 593 aa11.69□□□□□ -0.54
CDCA3-201ENST00000229265 KCNA10Q16322 511 aa11.69□□□□□ -0.54
CDCA3-201ENST00000229265 CCDC40Q4G0X9 1142 aa11.69□□□□□ -0.54
CDCA3-201ENST00000229265 C10orf76Q5T2E6 689 aa11.69□□□□□ -0.54
CDCA3-201ENST00000229265 NSMFQ6X4W1 530 aa11.69□□□□□ -0.54
CDCA3-201ENST00000229265 HS2ST1Q7LGA3 356 aa11.69□□□□□ -0.54
CDCA3-201ENST00000229265 EXOC8Q8IYI6 725 aa11.69□□□□□ -0.54
CDCA3-201ENST00000229265 ANKRD35Q8N283 1001 aa11.69□□□□□ -0.54
CDCA3-201ENST00000229265 MYCT1Q8N699 235 aa11.69□□□□□ -0.54
CDCA3-201ENST00000229265 NEK11Q8NG66 645 aa11.69□□□□□ -0.54
CDCA3-201ENST00000229265 DRC1Q96MC2 740 aa11.69□□□□□ -0.54
CDCA3-201ENST00000229265 UPF3AQ9H1J1 476 aaKnown RBP11.69□□□□□ -0.54
CDCA3-201ENST00000229265 LUC7LQ9NQ29 371 aaKnown RBP11.69□□□□□ -0.54
CDCA3-201ENST00000229265 DMAC2Q9NW81 257 aa11.69□□□□□ -0.54
CDCA3-201ENST00000229265 CEP72Q9P209 647 aa11.69□□□□□ -0.54
CDCA3-201ENST00000229265 ARMCX3Q9UH62 379 aaPredicted RBP11.69□□□□□ -0.54
CDCA3-201ENST00000229265 SCN5AQ14524 2016 aa11.69□□□□□ -0.54
CDCA3-201ENST00000229265 PES1O00541 588 aaKnown RBP11.68□□□□□ -0.54
CDCA3-201ENST00000229265 P4HA2O15460 535 aa11.68□□□□□ -0.54
CDCA3-201ENST00000229265 ATG7O95352 703 aa11.68□□□□□ -0.54
CDCA3-201ENST00000229265 SLU7O95391 586 aaKnown RBP11.68□□□□□ -0.54
CDCA3-201ENST00000229265 PSAPP07602 524 aa11.68□□□□□ -0.54
CDCA3-201ENST00000229265 CASQ1P31415 396 aa11.68□□□□□ -0.54
CDCA3-201ENST00000229265 RARRES1P49788 294 aa11.68□□□□□ -0.54
CDCA3-201ENST00000229265 CYP4A11Q02928 519 aa11.68□□□□□ -0.54
CDCA3-201ENST00000229265 FAAP100Q0VG06 881 aa11.68□□□□□ -0.54
CDCA3-201ENST00000229265 MAPK8IP2Q13387 824 aaPredicted RBP11.68□□□□□ -0.54
CDCA3-201ENST00000229265 FAM109BQ6ICB4 259 aaPredicted RBP11.68□□□□□ -0.54
CDCA3-201ENST00000229265 PADI6Q6TGC4 694 aa11.68□□□□□ -0.54
CDCA3-201ENST00000229265 C16orf59Q7L2K0 433 aa11.68□□□□□ -0.54
CDCA3-201ENST00000229265 ZNF467Q7Z7K2 595 aaPredicted RBP11.68□□□□□ -0.54
CDCA3-201ENST00000229265 SFR1Q86XK3 245 aa11.68□□□□□ -0.54
CDCA3-201ENST00000229265 FAM178BQ8IXR5 827 aa11.68□□□□□ -0.54
CDCA3-201ENST00000229265 IL31RAQ8NI17 732 aa11.68□□□□□ -0.54
CDCA3-201ENST00000229265 MORC4Q8TE76 937 aa11.68□□□□□ -0.54
CDCA3-201ENST00000229265 BADQ92934 168 aa11.68□□□□□ -0.54
CDCA3-201ENST00000229265 ATP6V0A1Q93050 837 aa11.68□□□□□ -0.54
CDCA3-201ENST00000229265 HPS3Q969F9 1004 aa11.68□□□□□ -0.54
CDCA3-201ENST00000229265 LXNQ9BS40 222 aa11.68□□□□□ -0.54
CDCA3-201ENST00000229265 TSGA10Q9BZW7 698 aa11.68□□□□□ -0.54
CDCA3-201ENST00000229265 AIPL1Q9NZN9 384 aa11.68□□□□□ -0.54
CDCA3-201ENST00000229265 EXOC7Q9UPT5 735 aa11.68□□□□□ -0.54
CDCA3-201ENST00000229265 KIAA1217Q5T5P2 1943 aa11.68□□□□□ -0.54
CDCA3-201ENST00000229265 POTEB2H3BUK9 544 aa11.67□□□□□ -0.54
CDCA3-201ENST00000229265 KRT86O43790 486 aa11.67□□□□□ -0.54
CDCA3-201ENST00000229265 USO1O60763 962 aaKnown RBP11.67□□□□□ -0.54
CDCA3-201ENST00000229265 PPP1R37O75864 691 aa11.67□□□□□ -0.54
CDCA3-201ENST00000229265 GCNT3O95395 438 aa11.67□□□□□ -0.54
CDCA3-201ENST00000229265 TUBBP07437 444 aa11.67□□□□□ -0.54
CDCA3-201ENST00000229265 EPB41P11171 864 aaKnown RBP11.67□□□□□ -0.54
CDCA3-201ENST00000229265 PLS3P13797 630 aa11.67□□□□□ -0.54
CDCA3-201ENST00000229265 NR2F2P24468 414 aa11.67□□□□□ -0.54
CDCA3-201ENST00000229265 ALDH5A1P51649 535 aaPredicted RBP11.67□□□□□ -0.54
CDCA3-201ENST00000229265 ACLYP53396 1101 aa11.67□□□□□ -0.54
CDCA3-201ENST00000229265 SMTNP53814 917 aa11.67□□□□□ -0.54
CDCA3-201ENST00000229265 GTF2BQ00403 316 aa11.67□□□□□ -0.54
CDCA3-201ENST00000229265 ITGB3BPQ13352 177 aaPredicted RBP11.67□□□□□ -0.54
CDCA3-201ENST00000229265 SHHQ15465 462 aa11.67□□□□□ -0.54
CDCA3-201ENST00000229265 WDR59Q6PJI9 974 aa11.67□□□□□ -0.54
CDCA3-201ENST00000229265 RAD9BQ6WBX8 426 aa11.67□□□□□ -0.54
CDCA3-201ENST00000229265 SYT10Q6XYQ8 523 aa11.67□□□□□ -0.54
CDCA3-201ENST00000229265 PDCL2Q8N4E4 241 aa11.67□□□□□ -0.54
CDCA3-201ENST00000229265 PIGOQ8TEQ8 1089 aa11.67□□□□□ -0.54
CDCA3-201ENST00000229265 SPIRE2Q8WWL2 714 aa11.67□□□□□ -0.54
CDCA3-201ENST00000229265 KIFAP3Q92845 792 aa11.67□□□□□ -0.54
CDCA3-201ENST00000229265 CCDC42Q96M95 316 aa11.67□□□□□ -0.54
CDCA3-201ENST00000229265 PCMTD1Q96MG8 357 aaPredicted RBP11.67□□□□□ -0.54
CDCA3-201ENST00000229265 FIZ1Q96SL8 496 aa11.67□□□□□ -0.54
CDCA3-201ENST00000229265 RUSC1Q9BVN2 902 aa11.67□□□□□ -0.54
CDCA3-201ENST00000229265 GBP3Q9H0R5 595 aa11.67□□□□□ -0.54
CDCA3-201ENST00000229265 TBC1D7Q9P0N9 293 aa11.67□□□□□ -0.54
CDCA3-201ENST00000229265 NR2E3Q9Y5X4 410 aa11.67□□□□□ -0.54
CDCA3-201ENST00000229265 GBF1Q92538 1859 aa11.67□□□□□ -0.54
CDCA3-201ENST00000229265 NPHP3-ACAD11A0A0J9YXS1 232 aa11.66□□□□□ -0.54
CDCA3-201ENST00000229265 KIAA0391O15091 583 aaKnown RBP11.66□□□□□ -0.54
CDCA3-201ENST00000229265 TGFB1I1O43294 461 aa11.66□□□□□ -0.54
CDCA3-201ENST00000229265 GFPT2O94808 682 aa11.66□□□□□ -0.54
CDCA3-201ENST00000229265 AFPP02771 609 aaKnown RBP11.66□□□□□ -0.54
CDCA3-201ENST00000229265 NR3C1P04150 777 aa11.66□□□□□ -0.54
CDCA3-201ENST00000229265 ASGR1P07306 291 aa11.66□□□□□ -0.54
CDCA3-201ENST00000229265 CCDC172P0C7W6 258 aa11.66□□□□□ -0.54
CDCA3-201ENST00000229265 RARBP10826 455 aa11.66□□□□□ -0.54
CDCA3-201ENST00000229265 MYCLP12524 364 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms