RNA–Protein interactions for RNA: ENST00000225603.8

CBX1-201, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-201ENST00000225603 CCAR2Q8N163 923 aaKnown RBP19.79■□□□□ 0.76
CBX1-201ENST00000225603 CNOT6LQ96LI5 555 aaKnown RBP19.79■□□□□ 0.76
CBX1-201ENST00000225603 XPNPEP3Q9NQH7 507 aa19.79■□□□□ 0.76
CBX1-201ENST00000225603 SUCLA2Q9P2R7 463 aaPredicted RBP19.79■□□□□ 0.76
CBX1-201ENST00000225603 COL1A2P08123 1366 aa19.79■□□□□ 0.76
CBX1-201ENST00000225603 LRRC10BA6NIK2 292 aa19.79■□□□□ 0.76
CBX1-201ENST00000225603 LRRIQ4A6NIV6 560 aa19.79■□□□□ 0.76
CBX1-201ENST00000225603 RRP9O43818 475 aaKnown RBP19.79■□□□□ 0.76
CBX1-201ENST00000225603 NAMPTP43490 491 aa19.79■□□□□ 0.76
CBX1-201ENST00000225603 LAMTOR4Q0VGL1 99 aa19.79■□□□□ 0.76
CBX1-201ENST00000225603 ADAM9Q13443 819 aa19.79■□□□□ 0.76
CBX1-201ENST00000225603 PPP4R3CPQ6ZMV5 832 aa19.79■□□□□ 0.76
CBX1-201ENST00000225603 SYCP3Q8IZU3 236 aa19.79■□□□□ 0.76
CBX1-201ENST00000225603 LINC01465Q8N7H1 131 aa19.79■□□□□ 0.76
CBX1-201ENST00000225603 ZNF668Q96K58 619 aaPredicted RBP19.79■□□□□ 0.76
CBX1-201ENST00000225603 ACCSQ96QU6 501 aa19.79■□□□□ 0.76
CBX1-201ENST00000225603 GBP3Q9H0R5 595 aa19.79■□□□□ 0.76
CBX1-201ENST00000225603 CALUO43852 315 aaPredicted RBP19.78■□□□□ 0.76
CBX1-201ENST00000225603 NR3C1P04150 777 aa19.78■□□□□ 0.76
CBX1-201ENST00000225603 NR2F2P24468 414 aa19.78■□□□□ 0.76
CBX1-201ENST00000225603 NKX3-2P78367 333 aa19.78■□□□□ 0.76
CBX1-201ENST00000225603 NYAP1Q6ZVC0 841 aa19.78■□□□□ 0.76
CBX1-201ENST00000225603 EXOC8Q8IYI6 725 aa19.78■□□□□ 0.76
CBX1-201ENST00000225603 SLC17A8Q8NDX2 589 aa19.78■□□□□ 0.76
CBX1-201ENST00000225603 LMBR1Q8WVP7 490 aa19.78■□□□□ 0.76
CBX1-201ENST00000225603 TCP11Q8WWU5 503 aa19.78■□□□□ 0.76
CBX1-201ENST00000225603 PSPC1Q8WXF1 523 aaKnown RBP19.78■□□□□ 0.76
CBX1-201ENST00000225603 VPS16Q9H269 839 aa19.78■□□□□ 0.76
CBX1-201ENST00000225603 AGPAT3Q9NRZ7 376 aa19.78■□□□□ 0.76
CBX1-201ENST00000225603 USP20Q9Y2K6 914 aa19.78■□□□□ 0.76
CBX1-201ENST00000225603 NRDCO43847 1150 aa19.78■□□□□ 0.76
CBX1-201ENST00000225603 GAS2O43903 313 aaKnown RBP19.78■□□□□ 0.76
CBX1-201ENST00000225603 GRK4P32298 578 aa19.78■□□□□ 0.76
CBX1-201ENST00000225603 KCNJ6P48051 423 aa19.78■□□□□ 0.76
CBX1-201ENST00000225603 COPB1P53618 953 aaKnown RBP19.78■□□□□ 0.76
CBX1-201ENST00000225603 CXCL17Q6UXB2 119 aa19.78■□□□□ 0.76
CBX1-201ENST00000225603 RHPN2Q8IUC4 686 aa19.78■□□□□ 0.76
CBX1-201ENST00000225603 SLAIN1Q8ND83 568 aa19.78■□□□□ 0.76
CBX1-201ENST00000225603 JPH2Q9BR39 696 aaPredicted RBP19.78■□□□□ 0.76
CBX1-201ENST00000225603 A0A1B0GTH6 734 aa19.77■□□□□ 0.76
CBX1-201ENST00000225603 MAGEB2O15479 319 aa19.77■□□□□ 0.76
CBX1-201ENST00000225603 TEX33O43247 280 aa19.77■□□□□ 0.76
CBX1-201ENST00000225603 SRGAP2CP0DJJ0 459 aa19.77■□□□□ 0.76
CBX1-201ENST00000225603 EEF1GP26641 437 aaKnown RBP19.77■□□□□ 0.76
CBX1-201ENST00000225603 PRMT2P55345 433 aa19.77■□□□□ 0.76
CBX1-201ENST00000225603 SPAG1Q07617 926 aa19.77■□□□□ 0.76
CBX1-201ENST00000225603 NR1I3Q14994 352 aa19.77■□□□□ 0.76
CBX1-201ENST00000225603 PPP2R5AQ15172 486 aa19.77■□□□□ 0.76
CBX1-201ENST00000225603 DEPTORQ8TB45 409 aa19.77■□□□□ 0.76
CBX1-201ENST00000225603 TMEM206Q9H813 350 aa19.77■□□□□ 0.76
CBX1-201ENST00000225603 MAGEC2Q9UBF1 373 aaPredicted RBP19.77■□□□□ 0.76
CBX1-201ENST00000225603 DDX20Q9UHI6 824 aaKnown RBP19.77■□□□□ 0.76
CBX1-201ENST00000225603 EVPLQ92817 2033 aa19.77■□□□□ 0.76
CBX1-201ENST00000225603 ANKRD63C9JTQ0 380 aa19.76■□□□□ 0.75
CBX1-201ENST00000225603 MYCNP04198 464 aaPredicted RBP19.76■□□□□ 0.75
CBX1-201ENST00000225603 CASP4P49662 377 aa19.76■□□□□ 0.75
CBX1-201ENST00000225603 CEP135Q66GS9 1140 aa19.76■□□□□ 0.75
CBX1-201ENST00000225603 MAP4K3Q8IVH8 894 aa19.76■□□□□ 0.75
CBX1-201ENST00000225603 RNF149Q8NC42 400 aa19.76■□□□□ 0.75
CBX1-201ENST00000225603 KLHDC9Q8NEP7 349 aa19.76■□□□□ 0.75
CBX1-201ENST00000225603 CEP63Q96MT8 703 aa19.76■□□□□ 0.75
CBX1-201ENST00000225603 SPC25Q9HBM1 224 aa19.76■□□□□ 0.75
CBX1-201ENST00000225603 TRMT1Q9NXH9 659 aaKnown RBP19.76■□□□□ 0.75
CBX1-201ENST00000225603 PAXBP1Q9Y5B6 917 aa19.76■□□□□ 0.75
CBX1-201ENST00000225603 EDN1P05305 212 aa19.76■□□□□ 0.75
CBX1-201ENST00000225603 ZNF200P98182 395 aaPredicted RBP19.76■□□□□ 0.75
CBX1-201ENST00000225603 HSP90AA2PQ14568 343 aaPredicted RBP19.76■□□□□ 0.75
CBX1-201ENST00000225603 PTPN14Q15678 1187 aa19.76■□□□□ 0.75
CBX1-201ENST00000225603 HS2ST1Q7LGA3 356 aa19.76■□□□□ 0.75
CBX1-201ENST00000225603 FAM114A1Q8IWE2 563 aa19.76■□□□□ 0.75
CBX1-201ENST00000225603 RETREG2Q8NC44 543 aa19.76■□□□□ 0.75
CBX1-201ENST00000225603 SH3TC2Q8TF17 1288 aa19.76■□□□□ 0.75
CBX1-201ENST00000225603 CETN3O15182 167 aa19.75■□□□□ 0.75
CBX1-201ENST00000225603 FGFR1OPO95684 399 aaKnown RBP19.75■□□□□ 0.75
CBX1-201ENST00000225603 MXD4Q14582 209 aaPredicted RBP19.75■□□□□ 0.75
CBX1-201ENST00000225603 E4F1Q66K89 784 aaPredicted RBP19.75■□□□□ 0.75
CBX1-201ENST00000225603 CCSAPQ6IQ19 270 aaPredicted RBP19.75■□□□□ 0.75
CBX1-201ENST00000225603 SLC39A4Q6P5W5 647 aa19.75■□□□□ 0.75
CBX1-201ENST00000225603 TSC1Q92574 1164 aa19.75■□□□□ 0.75
CBX1-201ENST00000225603 HVCN1Q96D96 273 aa19.75■□□□□ 0.75
CBX1-201ENST00000225603 PPP1R16BQ96T49 567 aa19.75■□□□□ 0.75
CBX1-201ENST00000225603 CBWD1Q9BRT8 395 aa19.75■□□□□ 0.75
CBX1-201ENST00000225603 TUBGCP2Q9BSJ2 902 aa19.75■□□□□ 0.75
CBX1-201ENST00000225603 DMAC2Q9NW81 257 aa19.75■□□□□ 0.75
CBX1-201ENST00000225603 HDAC6Q9UBN7 1215 aa19.75■□□□□ 0.75
CBX1-201ENST00000225603 RRN3P2A6NIE6 340 aa19.75■□□□□ 0.75
CBX1-201ENST00000225603 AKAP3O75969 853 aa19.75■□□□□ 0.75
CBX1-201ENST00000225603 DNM2P50570 870 aa19.75■□□□□ 0.75
CBX1-201ENST00000225603 CYP2J2P51589 502 aa19.75■□□□□ 0.75
CBX1-201ENST00000225603 ADAM17P78536 824 aa19.75■□□□□ 0.75
CBX1-201ENST00000225603 KCNA10Q16322 511 aa19.75■□□□□ 0.75
CBX1-201ENST00000225603 NFIL3Q16649 462 aa19.75■□□□□ 0.75
CBX1-201ENST00000225603 NLRP4Q96MN2 994 aa19.75■□□□□ 0.75
CBX1-201ENST00000225603 CTAGE1Q96RT6 745 aa19.75■□□□□ 0.75
CBX1-201ENST00000225603 MTG1Q9BT17 334 aaPredicted RBP19.75■□□□□ 0.75
CBX1-201ENST00000225603 KCNG1Q9UIX4 513 aa19.75■□□□□ 0.75
CBX1-201ENST00000225603 NRCAMQ92823 1304 aa19.75■□□□□ 0.75
CBX1-201ENST00000225603 N4BP3O15049 544 aa19.74■□□□□ 0.75
CBX1-201ENST00000225603 KPNA6O60684 536 aa19.74■□□□□ 0.75
CBX1-201ENST00000225603 VTNP04004 478 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms