RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 AP1M1Q9BXS5 423 aa17.24■□□□□ 0.35
SF3A2-201ENST00000221494 MOV10L1Q9BXT6 1211 aaKnown RBP17.24■□□□□ 0.35
SF3A2-201ENST00000221494 AMACRQ9UHK6 382 aa17.24■□□□□ 0.35
SF3A2-201ENST00000221494 DDX25Q9UHL0 483 aaKnown RBP17.24■□□□□ 0.35
SF3A2-201ENST00000221494 HACL1Q9UJ83 578 aa17.24■□□□□ 0.35
SF3A2-201ENST00000221494 RASAL2Q9UJF2 1139 aa17.24■□□□□ 0.35
SF3A2-201ENST00000221494 PDXKO00764 312 aa17.23■□□□□ 0.35
SF3A2-201ENST00000221494 CALUO43852 315 aaPredicted RBP17.23■□□□□ 0.35
SF3A2-201ENST00000221494 TMEM253P0C7T8 217 aa17.23■□□□□ 0.35
SF3A2-201ENST00000221494 PLA2G4BP0C869 781 aa17.23■□□□□ 0.35
SF3A2-201ENST00000221494 PON1P27169 355 aa17.23■□□□□ 0.35
SF3A2-201ENST00000221494 ARID5AQ03989 594 aa17.23■□□□□ 0.35
SF3A2-201ENST00000221494 ADCY2Q08462 1091 aa17.23■□□□□ 0.35
SF3A2-201ENST00000221494 NEK9Q8TD19 979 aa17.23■□□□□ 0.35
SF3A2-201ENST00000221494 POLD4Q9HCU8 107 aa17.23■□□□□ 0.35
SF3A2-201ENST00000221494 TTI1O43156 1089 aa17.22■□□□□ 0.35
SF3A2-201ENST00000221494 XRCC5P13010 732 aaKnown RBP17.22■□□□□ 0.35
SF3A2-201ENST00000221494 NR2F2P24468 414 aa17.22■□□□□ 0.35
SF3A2-201ENST00000221494 RPL13P26373 211 aaKnown RBP17.22■□□□□ 0.35
SF3A2-201ENST00000221494 ELF3P78545 371 aaPredicted RBP17.22■□□□□ 0.35
SF3A2-201ENST00000221494 EPHA7Q15375 998 aa17.22■□□□□ 0.35
SF3A2-201ENST00000221494 BMT2Q1RMZ1 405 aa17.22■□□□□ 0.35
SF3A2-201ENST00000221494 HERC4Q5GLZ8 1057 aaPredicted RBP17.22■□□□□ 0.35
SF3A2-201ENST00000221494 C6orf118Q5T5N4 469 aa17.22■□□□□ 0.35
SF3A2-201ENST00000221494 MOXD1Q6UVY6 613 aa17.22■□□□□ 0.35
SF3A2-201ENST00000221494 MAB21L3Q8N8X9 362 aa17.22■□□□□ 0.35
SF3A2-201ENST00000221494 ATP8B4Q8TF62 1192 aa17.22■□□□□ 0.35
SF3A2-201ENST00000221494 RFFLQ8WZ73 363 aa17.22■□□□□ 0.35
SF3A2-201ENST00000221494 HAS1Q92839 578 aa17.22■□□□□ 0.35
SF3A2-201ENST00000221494 ERP44Q9BS26 406 aa17.22■□□□□ 0.35
SF3A2-201ENST00000221494 GPCPD1Q9NPB8 672 aa17.22■□□□□ 0.35
SF3A2-201ENST00000221494 ZDHHC18Q9NUE0 388 aa17.22■□□□□ 0.35
SF3A2-201ENST00000221494 PCDHA12Q9UN75 941 aa17.22■□□□□ 0.35
SF3A2-201ENST00000221494 CTNND1O60716 968 aaKnown RBP17.22■□□□□ 0.35
SF3A2-201ENST00000221494 ATP6V1G2O95670 118 aa17.22■□□□□ 0.35
SF3A2-201ENST00000221494 CYP11B2P19099 503 aa17.22■□□□□ 0.35
SF3A2-201ENST00000221494 HADHBP55084 474 aaKnown RBP17.22■□□□□ 0.35
SF3A2-201ENST00000221494 GPATCH4Q5T3I0 446 aaKnown RBP17.22■□□□□ 0.35
SF3A2-201ENST00000221494 TTBK2Q6IQ55 1244 aa17.22■□□□□ 0.35
SF3A2-201ENST00000221494 EPM2AIP1Q7L775 607 aaPredicted RBP17.22■□□□□ 0.35
SF3A2-201ENST00000221494 GPBP1Q86WP2 473 aa17.22■□□□□ 0.35
SF3A2-201ENST00000221494 GBP7Q8N8V2 638 aaPredicted RBP17.22■□□□□ 0.35
SF3A2-201ENST00000221494 TRPM4Q8TD43 1214 aa17.22■□□□□ 0.35
SF3A2-201ENST00000221494 CUL5Q93034 780 aa17.22■□□□□ 0.35
SF3A2-201ENST00000221494 RUNDC3BQ96NL0 473 aa17.22■□□□□ 0.35
SF3A2-201ENST00000221494 DEFB129Q9H1M3 183 aa17.22■□□□□ 0.35
SF3A2-201ENST00000221494 VAT1LQ9HCJ6 419 aa17.22■□□□□ 0.35
SF3A2-201ENST00000221494 SAMD15Q9P1V8 674 aa17.22■□□□□ 0.35
SF3A2-201ENST00000221494 PNMA6FA0A0J9YX94 578 aa17.21■□□□□ 0.35
SF3A2-201ENST00000221494 A0A1W2PRG0 241 aa17.21■□□□□ 0.35
SF3A2-201ENST00000221494 F5H6K3 240 aa17.21■□□□□ 0.35
SF3A2-201ENST00000221494 GGPS1O95749 300 aa17.21■□□□□ 0.35
SF3A2-201ENST00000221494 FLT3P36888 993 aa17.21■□□□□ 0.35
SF3A2-201ENST00000221494 PMS2P54278 862 aa17.21■□□□□ 0.35
SF3A2-201ENST00000221494 KLRC3Q07444 240 aa17.21■□□□□ 0.35
SF3A2-201ENST00000221494 NFIL3Q16649 462 aa17.21■□□□□ 0.35
SF3A2-201ENST00000221494 KNOP1Q1ED39 458 aaKnown RBP17.21■□□□□ 0.35
SF3A2-201ENST00000221494 SLFN13Q68D06 897 aa17.21■□□□□ 0.35
SF3A2-201ENST00000221494 DENND2CQ68D51 928 aa17.21■□□□□ 0.35
SF3A2-201ENST00000221494 DAAM2Q86T65 1068 aa17.21■□□□□ 0.35
SF3A2-201ENST00000221494 GMCL1P1Q8NEA9 526 aa17.21■□□□□ 0.35
SF3A2-201ENST00000221494 ATXN2LQ8WWM7 1075 aaKnown RBP17.21■□□□□ 0.35
SF3A2-201ENST00000221494 EBF2Q9HAK2 575 aa17.21■□□□□ 0.35
SF3A2-201ENST00000221494 RNF181Q9P0P0 153 aa17.21■□□□□ 0.35
SF3A2-201ENST00000221494 ZBTB21Q9ULJ3 1066 aa17.21■□□□□ 0.35
SF3A2-201ENST00000221494 PHF20L1A8MW92 1017 aa17.2■□□□□ 0.34
SF3A2-201ENST00000221494 CAP2P40123 477 aa17.2■□□□□ 0.34
SF3A2-201ENST00000221494 STAT1P42224 750 aa17.2■□□□□ 0.34
SF3A2-201ENST00000221494 DR1Q01658 176 aa17.2■□□□□ 0.34
SF3A2-201ENST00000221494 TCEAL1Q15170 157 aa17.2■□□□□ 0.34
SF3A2-201ENST00000221494 ECM1Q16610 540 aa17.2■□□□□ 0.34
SF3A2-201ENST00000221494 SPRED3Q2MJR0 410 aa17.2■□□□□ 0.34
SF3A2-201ENST00000221494 KCTD1Q719H9 257 aa17.2■□□□□ 0.34
SF3A2-201ENST00000221494 CEP57Q86XR8 500 aa17.2■□□□□ 0.34
SF3A2-201ENST00000221494 SLC30A5Q8TAD4 765 aa17.2■□□□□ 0.34
SF3A2-201ENST00000221494 DCAF4Q8WV16 495 aa17.2■□□□□ 0.34
SF3A2-201ENST00000221494 RSRC1Q96IZ7 334 aaKnown RBP17.2■□□□□ 0.34
SF3A2-201ENST00000221494 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.2■□□□□ 0.34
SF3A2-201ENST00000221494 SYNPO2Q9UMS6 1093 aa17.2■□□□□ 0.34
SF3A2-201ENST00000221494 IRF6O14896 467 aa17.2■□□□□ 0.34
SF3A2-201ENST00000221494 DDNO94850 711 aaPredicted RBP17.2■□□□□ 0.34
SF3A2-201ENST00000221494 MMEP08473 750 aa17.2■□□□□ 0.34
SF3A2-201ENST00000221494 ZNF131P52739 623 aa17.2■□□□□ 0.34
SF3A2-201ENST00000221494 HIRAP54198 1017 aaPredicted RBP17.2■□□□□ 0.34
SF3A2-201ENST00000221494 PPATQ06203 517 aa17.2■□□□□ 0.34
SF3A2-201ENST00000221494 GPIHBP1Q8IV16 184 aa17.2■□□□□ 0.34
SF3A2-201ENST00000221494 NELFCDQ8IXH7 590 aa17.2■□□□□ 0.34
SF3A2-201ENST00000221494 SLFN12Q8IYM2 578 aa17.2■□□□□ 0.34
SF3A2-201ENST00000221494 CCDC63Q8NA47 563 aa17.2■□□□□ 0.34
SF3A2-201ENST00000221494 MBOAT7Q96N66 472 aa17.2■□□□□ 0.34
SF3A2-201ENST00000221494 SCLT1Q96NL6 688 aa17.2■□□□□ 0.34
SF3A2-201ENST00000221494 JMJD4Q9H9V9 463 aa17.2■□□□□ 0.34
SF3A2-201ENST00000221494 NOD2Q9HC29 1040 aa17.2■□□□□ 0.34
SF3A2-201ENST00000221494 SIX2Q9NPC8 291 aa17.2■□□□□ 0.34
SF3A2-201ENST00000221494 TYW1Q9NV66 732 aaKnown RBP17.2■□□□□ 0.34
SF3A2-201ENST00000221494 CYP3A7-CYP3A51PA0A087WV96 503 aa17.19■□□□□ 0.34
SF3A2-201ENST00000221494 DDX3XO00571 662 aaKnown RBP eCLIP17.19■□□□□ 0.342e-16■■□□□ 14.1
SF3A2-201ENST00000221494 PODXLO00592 558 aa17.19■□□□□ 0.34
SF3A2-201ENST00000221494 DDX3YO15523 660 aaKnown RBP17.19■□□□□ 0.34
SF3A2-201ENST00000221494 MARCH6O60337 910 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms